RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 BLNKQ8WV28 456 aa8.33□□□□□ -1.08
VRK1-204ENST00000555351 RNF141Q8WVD5 230 aa8.33□□□□□ -1.08
VRK1-204ENST00000555351 FXYD5Q96DB9 178 aa8.33□□□□□ -1.08
VRK1-204ENST00000555351 PAXXQ9BUH6 204 aa8.33□□□□□ -1.08
VRK1-204ENST00000555351 AGPAT4-IT1Q9H0P7 198 aa8.33□□□□□ -1.08
VRK1-204ENST00000555351 DNAH6Q9C0G6 4158 aa8.32□□□□□ -1.08
VRK1-204ENST00000555351 TRAV12-3A0A0B4J271 114 aa8.32□□□□□ -1.08
VRK1-204ENST00000555351 C7orf71A4D174 169 aa8.32□□□□□ -1.08
VRK1-204ENST00000555351 RBAKDNA6NC62 111 aa8.32□□□□□ -1.08
VRK1-204ENST00000555351 H3BNG1 76 aa8.32□□□□□ -1.08
VRK1-204ENST00000555351 ZNF324O75467 553 aaPredicted RBP8.32□□□□□ -1.08
VRK1-204ENST00000555351 ICAM4Q14773 271 aa8.32□□□□□ -1.08
VRK1-204ENST00000555351 ANXA2RQ3ZCQ2 193 aa8.32□□□□□ -1.08
VRK1-204ENST00000555351 TMEM78Q5T7P6 136 aa8.32□□□□□ -1.08
VRK1-204ENST00000555351 Q6ZR54 194 aa8.32□□□□□ -1.08
VRK1-204ENST00000555351 EXOC3-AS1Q8N2X6 119 aa8.32□□□□□ -1.08
VRK1-204ENST00000555351 ARL6IP6Q8N6S5 226 aa8.32□□□□□ -1.08
VRK1-204ENST00000555351 ASB13Q8WXK3 278 aa8.32□□□□□ -1.08
VRK1-204ENST00000555351 ZNF503Q96F45 646 aa8.32□□□□□ -1.08
VRK1-204ENST00000555351 C18orf15Q96N68 181 aa8.32□□□□□ -1.08
VRK1-204ENST00000555351 NOP10Q9NPE3 64 aaKnown RBP8.32□□□□□ -1.08
VRK1-204ENST00000555351 MBD2Q9UBB5 411 aa8.32□□□□□ -1.08
VRK1-204ENST00000555351 F5H768 121 aa8.31□□□□□ -1.08
VRK1-204ENST00000555351 FCN2Q15485 313 aa8.31□□□□□ -1.08
VRK1-204ENST00000555351 KHDC3LQ587J8 217 aa8.31□□□□□ -1.08
VRK1-204ENST00000555351 FFAR4Q5NUL3 377 aa8.31□□□□□ -1.08
VRK1-204ENST00000555351 ZNF492Q9P255 531 aa8.31□□□□□ -1.08
VRK1-204ENST00000555351 LENEPQ9Y5L5 61 aa8.31□□□□□ -1.08
VRK1-204ENST00000555351 FRAS1Q86XX4 4008 aa8.31□□□□□ -1.08
VRK1-204ENST00000555351 DNAH10Q8IVF4 4471 aa8.3□□□□□ -1.08
VRK1-204ENST00000555351 OR7C2O60412 319 aa8.3□□□□□ -1.08
VRK1-204ENST00000555351 GPX1P07203 203 aa8.3□□□□□ -1.08
VRK1-204ENST00000555351 PRB4P10163 310 aaPredicted RBP8.3□□□□□ -1.08
VRK1-204ENST00000555351 CSN1S1P47710 185 aa8.3□□□□□ -1.08
VRK1-204ENST00000555351 ZNF138P52744 262 aa8.3□□□□□ -1.08
VRK1-204ENST00000555351 ERCC8Q13216 396 aa8.3□□□□□ -1.08
VRK1-204ENST00000555351 IBA57Q5T440 356 aaKnown RBP8.3□□□□□ -1.08
VRK1-204ENST00000555351 EIF4E3Q8N5X7 224 aaKnown RBP8.3□□□□□ -1.08
VRK1-204ENST00000555351 ZFAND2AQ8N6M9 145 aa8.3□□□□□ -1.08
VRK1-204ENST00000555351 RXFP4Q8TDU9 374 aa8.3□□□□□ -1.08
VRK1-204ENST00000555351 ALG5Q9Y673 324 aa8.3□□□□□ -1.08
VRK1-204ENST00000555351 OR10J4P0C629 311 aa8.29□□□□□ -1.08
VRK1-204ENST00000555351 M6PRP20645 277 aa8.29□□□□□ -1.08
VRK1-204ENST00000555351 CCL18P55774 89 aa8.29□□□□□ -1.08
VRK1-204ENST00000555351 UBE2L3P68036 154 aaKnown RBP8.29□□□□□ -1.08
VRK1-204ENST00000555351 ACOT6Q3I5F7 207 aaPredicted RBP8.29□□□□□ -1.08
VRK1-204ENST00000555351 SOHLH1Q5JUK2 328 aa8.29□□□□□ -1.08
VRK1-204ENST00000555351 FAM122CQ6P4D5 195 aa8.29□□□□□ -1.08
VRK1-204ENST00000555351 PQLC2Q6ZP29 291 aa8.29□□□□□ -1.08
VRK1-204ENST00000555351 C11orf72Q8NBR9 251 aa8.29□□□□□ -1.08
VRK1-204ENST00000555351 TMED6Q8WW62 240 aa8.29□□□□□ -1.08
VRK1-204ENST00000555351 PHYHIPLQ96FC7 376 aa8.29□□□□□ -1.08
VRK1-204ENST00000555351 ATG101Q9BSB4 218 aa8.29□□□□□ -1.08
VRK1-204ENST00000555351 IGKV2-40A0A087WW87 121 aaPredicted RBP8.28□□□□□ -1.08
VRK1-204ENST00000555351 J3KRW8 73 aa8.28□□□□□ -1.08
VRK1-204ENST00000555351 RTL8CO15255 209 aa8.28□□□□□ -1.08
VRK1-204ENST00000555351 IGKV2D-40P01614 121 aaPredicted RBP8.28□□□□□ -1.08
VRK1-204ENST00000555351 RNASE4P34096 147 aaKnown RBP8.28□□□□□ -1.08
VRK1-204ENST00000555351 TCL1AP56279 114 aa8.28□□□□□ -1.08
VRK1-204ENST00000555351 RANP62826 216 aaKnown RBP8.28□□□□□ -1.08
VRK1-204ENST00000555351 CD300CQ08708 224 aa8.28□□□□□ -1.08
VRK1-204ENST00000555351 ZNF266Q14584 549 aa8.28□□□□□ -1.08
VRK1-204ENST00000555351 AQP10Q96PS8 301 aa8.28□□□□□ -1.08
VRK1-204ENST00000555351 VGLL1Q99990 258 aa8.28□□□□□ -1.08
VRK1-204ENST00000555351 Q9H3A6 140 aa8.28□□□□□ -1.08
VRK1-204ENST00000555351 A0A1B0GVY2 172 aa8.27□□□□□ -1.09
VRK1-204ENST00000555351 GAGE12BA1L429 117 aa8.27□□□□□ -1.09
VRK1-204ENST00000555351 GAGE7O76087 117 aa8.27□□□□□ -1.09
VRK1-204ENST00000555351 GAGE12FP0CL80 117 aa8.27□□□□□ -1.09
VRK1-204ENST00000555351 GAGE12GP0CL81 117 aa8.27□□□□□ -1.09
VRK1-204ENST00000555351 GAGE12IP0CL82 117 aa8.27□□□□□ -1.09
VRK1-204ENST00000555351 BTN1A1Q13410 526 aa8.27□□□□□ -1.09
VRK1-204ENST00000555351 FAM74A1Q5RGS3 127 aa8.27□□□□□ -1.09
VRK1-204ENST00000555351 OR2G3Q8NGZ4 309 aa8.27□□□□□ -1.09
VRK1-204ENST00000555351 GNPNAT1Q96EK6 184 aaPredicted RBP8.27□□□□□ -1.09
VRK1-204ENST00000555351 PSMG3Q9BT73 122 aaPredicted RBP8.27□□□□□ -1.09
VRK1-204ENST00000555351 SMIM3Q9BZL3 60 aa8.27□□□□□ -1.09
VRK1-204ENST00000555351 MED28Q9H204 178 aa8.27□□□□□ -1.09
VRK1-204ENST00000555351 WFDC1Q9HC57 220 aa8.27□□□□□ -1.09
VRK1-204ENST00000555351 OTORQ9NRC9 128 aa8.27□□□□□ -1.09
VRK1-204ENST00000555351 NACAE9PAV3 2078 aa8.26□□□□□ -1.09
VRK1-204ENST00000555351 IGHV1OR15-1A0A075B7D0 117 aa8.26□□□□□ -1.09
VRK1-204ENST00000555351 A0A1W2PPV4 95 aa8.26□□□□□ -1.09
VRK1-204ENST00000555351 PRSS29PA6NIE9 313 aa8.26□□□□□ -1.09
VRK1-204ENST00000555351 DIRC3C9JPN6 131 aa8.26□□□□□ -1.09
VRK1-204ENST00000555351 M0R2N4 97 aa8.26□□□□□ -1.09
VRK1-204ENST00000555351 SPINK4O60575 86 aa8.26□□□□□ -1.09
VRK1-204ENST00000555351 NUDT3O95989 172 aa8.26□□□□□ -1.09
VRK1-204ENST00000555351 GIPP09681 153 aaPredicted RBP8.26□□□□□ -1.09
VRK1-204ENST00000555351 Q6ZTI0 123 aa8.26□□□□□ -1.09
VRK1-204ENST00000555351 ZNRF2Q8NHG8 242 aa8.26□□□□□ -1.09
VRK1-204ENST00000555351 GSN-AS1Q9NRJ2 163 aa8.26□□□□□ -1.09
VRK1-204ENST00000555351 TP53TG3Q9ULZ0 132 aa8.26□□□□□ -1.09
VRK1-204ENST00000555351 HECTD4Q9Y4D8 3996 aa8.25□□□□□ -1.09
VRK1-204ENST00000555351 IGLV2-18A0A075B6J9 118 aa8.25□□□□□ -1.09
VRK1-204ENST00000555351 TRGV2A0A075B6R0 118 aa8.25□□□□□ -1.09
VRK1-204ENST00000555351 TRAV26-1A0A087WT03 109 aa8.25□□□□□ -1.09
VRK1-204ENST00000555351 RGS13O14921 159 aa8.25□□□□□ -1.09
VRK1-204ENST00000555351 MBP02144 154 aa8.25□□□□□ -1.09
VRK1-204ENST00000555351 HOXA5P20719 270 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms