RNA–Protein interactions for RNA: ENST00000555232.5

ARHGEF40-206, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 3,902 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-206ENST00000555232 SMKR1H3BMG3 65 aa9.64□□□□□ -0.87
ARHGEF40-206ENST00000555232 IGHV1-69P01742 117 aa9.64□□□□□ -0.87
ARHGEF40-206ENST00000555232 PPBPP02775 128 aa9.64□□□□□ -0.87
ARHGEF40-206ENST00000555232 RNASE4P34096 147 aaKnown RBP9.64□□□□□ -0.87
ARHGEF40-206ENST00000555232 RBPMS2Q6ZRY4 209 aaKnown RBP9.64□□□□□ -0.87
ARHGEF40-206ENST00000555232 OR4X2Q8NGF9 303 aa9.64□□□□□ -0.87
ARHGEF40-206ENST00000555232 C8orf49Q96NF6 230 aa9.64□□□□□ -0.87
ARHGEF40-206ENST00000555232 FBLL1A6NHQ2 334 aaKnown RBP9.64□□□□□ -0.87
ARHGEF40-206ENST00000555232 K7EN84 100 aa9.64□□□□□ -0.87
ARHGEF40-206ENST00000555232 IGKV1-17P01599 117 aa9.64□□□□□ -0.87
ARHGEF40-206ENST00000555232 C1orf122Q6ZSJ8 110 aa9.64□□□□□ -0.87
ARHGEF40-206ENST00000555232 SYNJ2BPP57105 145 aa9.63□□□□□ -0.87
ARHGEF40-206ENST00000555232 GCN1Q92616 2671 aaKnown RBP9.63□□□□□ -0.87
ARHGEF40-206ENST00000555232 HLA-DQA1P01909 254 aa9.63□□□□□ -0.87
ARHGEF40-206ENST00000555232 P0C879 139 aa9.63□□□□□ -0.87
ARHGEF40-206ENST00000555232 ATP5IP56385 69 aaPredicted RBP9.63□□□□□ -0.87
ARHGEF40-206ENST00000555232 SMIM12Q96EX1 92 aa9.63□□□□□ -0.87
ARHGEF40-206ENST00000555232 TRGV9Q99603 122 aa9.63□□□□□ -0.87
ARHGEF40-206ENST00000555232 RPP21Q9H633 154 aaKnown RBP9.63□□□□□ -0.87
ARHGEF40-206ENST00000555232 CHTOPQ9Y3Y2 248 aaKnown RBP9.63□□□□□ -0.87
ARHGEF40-206ENST00000555232 TOMM40O96008 361 aa9.63□□□□□ -0.87
ARHGEF40-206ENST00000555232 DEFB112Q30KQ8 113 aa9.63□□□□□ -0.87
ARHGEF40-206ENST00000555232 LINC00311Q8N616 119 aa9.63□□□□□ -0.87
ARHGEF40-206ENST00000555232 LEPROTL1O95214 131 aa9.63□□□□□ -0.87
ARHGEF40-206ENST00000555232 NMUP48645 174 aa9.63□□□□□ -0.87
ARHGEF40-206ENST00000555232 SRSF2Q01130 221 aaKnown RBP9.63□□□□□ -0.87
ARHGEF40-206ENST00000555232 PRORYQ9H606 182 aa9.63□□□□□ -0.87
ARHGEF40-206ENST00000555232 MGAM2Q2M2H8 2515 aa9.62□□□□□ -0.87
ARHGEF40-206ENST00000555232 DCHS2Q6V1P9 2916 aa9.62□□□□□ -0.87
ARHGEF40-206ENST00000555232 IGHV7-81A0A0B4J1V7 117 aa9.62□□□□□ -0.87
ARHGEF40-206ENST00000555232 TMEM116Q8NCL8 245 aa9.62□□□□□ -0.87
ARHGEF40-206ENST00000555232 TET2Q6N021 2002 aaPredicted RBP9.62□□□□□ -0.87
ARHGEF40-206ENST00000555232 MINOS1Q5TGZ0 78 aa9.62□□□□□ -0.87
ARHGEF40-206ENST00000555232 TMEM136Q6ZRR5 245 aa9.62□□□□□ -0.87
ARHGEF40-206ENST00000555232 MINOS1-NBL1R4GNA1 71 aa9.62□□□□□ -0.87
ARHGEF40-206ENST00000555232 RPL24P83731 157 aaKnown RBP9.62□□□□□ -0.87
ARHGEF40-206ENST00000555232 FOXL1Q12952 345 aa9.62□□□□□ -0.87
ARHGEF40-206ENST00000555232 NUP35Q8NFH5 326 aa9.62□□□□□ -0.87
ARHGEF40-206ENST00000555232 PHLDA3Q9Y5J5 127 aa9.62□□□□□ -0.87
ARHGEF40-206ENST00000555232 CUBNO60494 3623 aa9.61□□□□□ -0.87
ARHGEF40-206ENST00000555232 A0A1W2PS18 150 aa9.61□□□□□ -0.87
ARHGEF40-206ENST00000555232 HBBP68871 147 aa9.61□□□□□ -0.87
ARHGEF40-206ENST00000555232 POU2AF1Q16633 256 aa9.61□□□□□ -0.87
ARHGEF40-206ENST00000555232 CR1LQ2VPA4 569 aa9.61□□□□□ -0.87
ARHGEF40-206ENST00000555232 PSMG4Q5JS54 123 aa9.61□□□□□ -0.87
ARHGEF40-206ENST00000555232 PVRIGQ6DKI7 326 aa9.61□□□□□ -0.87
ARHGEF40-206ENST00000555232 BBC3Q96PG8 261 aaPredicted RBP9.61□□□□□ -0.87
ARHGEF40-206ENST00000555232 MAP1LC3CQ9BXW4 147 aa9.61□□□□□ -0.87
ARHGEF40-206ENST00000555232 K7EIM0 57 aa9.61□□□□□ -0.87
ARHGEF40-206ENST00000555232 EMP1P54849 157 aa9.61□□□□□ -0.87
ARHGEF40-206ENST00000555232 EIF4EBP1Q13541 118 aaPredicted RBP9.61□□□□□ -0.87
ARHGEF40-206ENST00000555232 ZNF491Q8N8L2 437 aa9.61□□□□□ -0.87
ARHGEF40-206ENST00000555232 LINC00477Q96M19 166 aa9.61□□□□□ -0.87
ARHGEF40-206ENST00000555232 CTRLP40313 264 aa9.61□□□□□ -0.87
ARHGEF40-206ENST00000555232 FAM162BQ5T6X4 162 aa9.61□□□□□ -0.87
ARHGEF40-206ENST00000555232 NPFFR1Q9GZQ6 430 aa9.61□□□□□ -0.87
ARHGEF40-206ENST00000555232 TMEM191AQ9H0A3 160 aa9.61□□□□□ -0.87
ARHGEF40-206ENST00000555232 A0A1B0GUT8 65 aa9.6□□□□□ -0.87
ARHGEF40-206ENST00000555232 ZNF324O75467 553 aaPredicted RBP9.6□□□□□ -0.87
ARHGEF40-206ENST00000555232 IGLL1P15814 213 aa9.6□□□□□ -0.87
ARHGEF40-206ENST00000555232 KRTAP10-9P60411 292 aa9.6□□□□□ -0.87
ARHGEF40-206ENST00000555232 LMO4P61968 165 aa9.6□□□□□ -0.87
ARHGEF40-206ENST00000555232 SMAGPQ0VAQ4 97 aa9.6□□□□□ -0.87
ARHGEF40-206ENST00000555232 NSUN5P1Q3KNT7 163 aa9.6□□□□□ -0.87
ARHGEF40-206ENST00000555232 FXYD5Q96DB9 178 aa9.6□□□□□ -0.87
ARHGEF40-206ENST00000555232 OTORQ9NRC9 128 aa9.6□□□□□ -0.87
ARHGEF40-206ENST00000555232 GAGE10A6NGK3 116 aa9.6□□□□□ -0.87
ARHGEF40-206ENST00000555232 TRBV12-3P01733 135 aa9.6□□□□□ -0.87
ARHGEF40-206ENST00000555232 MT-ND6P03923 174 aa9.6□□□□□ -0.87
ARHGEF40-206ENST00000555232 C10orf99Q6UWK7 81 aa9.6□□□□□ -0.87
ARHGEF40-206ENST00000555232 SVEP1Q4LDE5 3571 aa9.6□□□□□ -0.87
ARHGEF40-206ENST00000555232 TEX22C9J3V5 150 aa9.6□□□□□ -0.87
ARHGEF40-206ENST00000555232 H3BVH4 76 aa9.6□□□□□ -0.87
ARHGEF40-206ENST00000555232 OR1N2Q8NGR9 330 aa9.6□□□□□ -0.87
ARHGEF40-206ENST00000555232 VGLL1Q99990 258 aa9.6□□□□□ -0.87
ARHGEF40-206ENST00000555232 CDC42EP3Q9UKI2 254 aa9.6□□□□□ -0.87
ARHGEF40-206ENST00000555232 ARMS2P0C7Q2 107 aa9.59□□□□□ -0.87
ARHGEF40-206ENST00000555232 IGHV3-73A0A0B4J1V6 119 aa9.59□□□□□ -0.87
ARHGEF40-206ENST00000555232 TMEM213A2RRL7 107 aa9.59□□□□□ -0.87
ARHGEF40-206ENST00000555232 SAMD13Q5VXD3 122 aa9.59□□□□□ -0.87
ARHGEF40-206ENST00000555232 OR4C46A6NHA9 309 aa9.59□□□□□ -0.87
ARHGEF40-206ENST00000555232 HOXA3O43365 443 aaPredicted RBP9.59□□□□□ -0.87
ARHGEF40-206ENST00000555232 APOHP02749 345 aaPredicted RBP9.59□□□□□ -0.87
ARHGEF40-206ENST00000555232 BMI1P35226 326 aa9.59□□□□□ -0.87
ARHGEF40-206ENST00000555232 YPEL3P61236 119 aaPredicted RBP9.59□□□□□ -0.87
ARHGEF40-206ENST00000555232 PSG9Q00887 426 aa9.59□□□□□ -0.87
ARHGEF40-206ENST00000555232 FBXL19-AS1Q494R0 122 aa9.59□□□□□ -0.87
ARHGEF40-206ENST00000555232 EBLN2Q6P2I7 272 aa9.59□□□□□ -0.87
ARHGEF40-206ENST00000555232 Q8N9W7 124 aa9.59□□□□□ -0.87
ARHGEF40-206ENST00000555232 RHPN1-AS1Q9BWJ2 59 aa9.59□□□□□ -0.87
ARHGEF40-206ENST00000555232 GTSF1LQ9H1H1 148 aa9.59□□□□□ -0.87
ARHGEF40-206ENST00000555232 RAI1Q7Z5J4 1906 aaPredicted RBP9.59□□□□□ -0.88
ARHGEF40-206ENST00000555232 SIGLEC15Q6ZMC9 328 aa9.58□□□□□ -0.88
ARHGEF40-206ENST00000555232 MRPS16Q9Y3D3 137 aaKnown RBP9.58□□□□□ -0.88
ARHGEF40-206ENST00000555232 hDV102S1A0JD36 115 aa9.58□□□□□ -0.88
ARHGEF40-206ENST00000555232 LYZL1Q6UWQ5 148 aa9.58□□□□□ -0.88
ARHGEF40-206ENST00000555232 Q8N976 141 aa9.58□□□□□ -0.88
ARHGEF40-206ENST00000555232 ZNF503Q96F45 646 aa9.58□□□□□ -0.88
ARHGEF40-206ENST00000555232 FAM181BA6NEQ2 426 aa9.58□□□□□ -0.88
ARHGEF40-206ENST00000555232 COX19Q49B96 90 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms