RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 BHLHE40O14503 412 aa2.2□□□□□ -2.06
CKS1BP1-201ENST00000555221 CDC42EP2O14613 210 aa2.2□□□□□ -2.06
CKS1BP1-201ENST00000555221 CD2P06729 351 aa2.2□□□□□ -2.06
CKS1BP1-201ENST00000555221 UCHL1P09936 223 aa2.2□□□□□ -2.06
CKS1BP1-201ENST00000555221 MYL12AP19105 171 aa2.2□□□□□ -2.06
CKS1BP1-201ENST00000555221 ALOX5APP20292 161 aa2.2□□□□□ -2.06
CKS1BP1-201ENST00000555221 RPL27AP46776 148 aaKnown RBP2.2□□□□□ -2.06
CKS1BP1-201ENST00000555221 SNRPGP62308 76 aaKnown RBP2.2□□□□□ -2.06
CKS1BP1-201ENST00000555221 HIST1H3AP68431 136 aa2.2□□□□□ -2.06
CKS1BP1-201ENST00000555221 PPP1R1AQ13522 171 aa2.2□□□□□ -2.06
CKS1BP1-201ENST00000555221 CCDC58Q4VC31 144 aa2.2□□□□□ -2.06
CKS1BP1-201ENST00000555221 OGFRL1Q5TC84 451 aaPredicted RBP2.2□□□□□ -2.06
CKS1BP1-201ENST00000555221 HIST2H3PS2Q5TEC6 136 aa2.2□□□□□ -2.06
CKS1BP1-201ENST00000555221 TMEM244Q5VVB8 128 aa2.2□□□□□ -2.06
CKS1BP1-201ENST00000555221 LPCAT4Q643R3 524 aa2.2□□□□□ -2.06
CKS1BP1-201ENST00000555221 HIST2H3AQ71DI3 136 aa2.2□□□□□ -2.06
CKS1BP1-201ENST00000555221 OR6V1Q8N148 313 aa2.2□□□□□ -2.06
CKS1BP1-201ENST00000555221 ACBD7Q8N6N7 88 aa2.2□□□□□ -2.06
CKS1BP1-201ENST00000555221 OR5D14Q8NGL3 314 aa2.2□□□□□ -2.06
CKS1BP1-201ENST00000555221 CLDND2Q8NHS1 167 aa2.2□□□□□ -2.06
CKS1BP1-201ENST00000555221 OTOSQ8NHW6 89 aa2.2□□□□□ -2.06
CKS1BP1-201ENST00000555221 THEM6Q8WUY1 208 aa2.2□□□□□ -2.06
CKS1BP1-201ENST00000555221 TSPAN32Q96QS1 320 aa2.2□□□□□ -2.06
CKS1BP1-201ENST00000555221 OR51V1Q9H2C8 321 aa2.2□□□□□ -2.06
CKS1BP1-201ENST00000555221 TVP23BQ9NYZ1 205 aa2.2□□□□□ -2.06
CKS1BP1-201ENST00000555221 TAAR3PQ9P1P4 343 aa2.2□□□□□ -2.06
CKS1BP1-201ENST00000555221 MPC1Q9Y5U8 109 aa2.2□□□□□ -2.06
CKS1BP1-201ENST00000555221 V9GYQ6 96 aa2.2□□□□□ -2.06
CKS1BP1-201ENST00000555221 PLCE1Q9P212 2302 aa2.2□□□□□ -2.06
CKS1BP1-201ENST00000555221 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.19□□□□□ -2.06
CKS1BP1-201ENST00000555221 IGLV3-9A0A075B6K5 115 aa2.19□□□□□ -2.06
CKS1BP1-201ENST00000555221 TRAV38-1A0A0B4J264 116 aa2.19□□□□□ -2.06
CKS1BP1-201ENST00000555221 IGHV1-18A0A0C4DH31 117 aa2.19□□□□□ -2.06
CKS1BP1-201ENST00000555221 IGHV1-69-2A0A0G2JMI3 117 aa2.19□□□□□ -2.06
CKS1BP1-201ENST00000555221 LOC100130705A0A1B0GUX0 176 aa2.19□□□□□ -2.06
CKS1BP1-201ENST00000555221 TMEM269A0A1B0GVZ9 245 aa2.19□□□□□ -2.06
CKS1BP1-201ENST00000555221 FUOMA2VDF0 154 aa2.19□□□□□ -2.06
CKS1BP1-201ENST00000555221 TMEM210A6NLX4 147 aa2.19□□□□□ -2.06
CKS1BP1-201ENST00000555221 IQCF6A8MYZ5 107 aa2.19□□□□□ -2.06
CKS1BP1-201ENST00000555221 CLDN25C9JDP6 229 aa2.19□□□□□ -2.06
CKS1BP1-201ENST00000555221 LRRN3E7EW58 273 aa2.19□□□□□ -2.06
CKS1BP1-201ENST00000555221 OVOL1O14753 267 aa2.19□□□□□ -2.06
CKS1BP1-201ENST00000555221 MRPS14O60783 128 aaKnown RBP2.19□□□□□ -2.06
CKS1BP1-201ENST00000555221 C1QCP02747 245 aa2.19□□□□□ -2.06
CKS1BP1-201ENST00000555221 SPI1P17947 270 aa2.19□□□□□ -2.06
CKS1BP1-201ENST00000555221 GABRA2P47869 451 aa2.19□□□□□ -2.06
CKS1BP1-201ENST00000555221 RBM11P57052 281 aaKnown RBP2.19□□□□□ -2.06
CKS1BP1-201ENST00000555221 TNFAIP6P98066 277 aaPredicted RBP2.19□□□□□ -2.06
CKS1BP1-201ENST00000555221 FAM78BQ5VT40 261 aa2.19□□□□□ -2.06
CKS1BP1-201ENST00000555221 LRRN1Q6UXK5 716 aa2.19□□□□□ -2.06
CKS1BP1-201ENST00000555221 DCXRQ7Z4W1 244 aa2.19□□□□□ -2.06
CKS1BP1-201ENST00000555221 Q8IYB0 196 aa2.19□□□□□ -2.06
CKS1BP1-201ENST00000555221 C8orf59Q8N0T1 100 aaPredicted RBP2.19□□□□□ -2.06
CKS1BP1-201ENST00000555221 OR5A2Q8NGI9 324 aa2.19□□□□□ -2.06
CKS1BP1-201ENST00000555221 RNASE11Q8TAA1 199 aaKnown RBP2.19□□□□□ -2.06
CKS1BP1-201ENST00000555221 RNF133Q8WVZ7 376 aa2.19□□□□□ -2.06
CKS1BP1-201ENST00000555221 PYDC1Q8WXC3 89 aa2.19□□□□□ -2.06
CKS1BP1-201ENST00000555221 PP6455Q8WZ26 134 aa2.19□□□□□ -2.06
CKS1BP1-201ENST00000555221 SLAMF6Q96DU3 332 aa2.19□□□□□ -2.06
CKS1BP1-201ENST00000555221 S100A13Q99584 98 aa2.19□□□□□ -2.06
CKS1BP1-201ENST00000555221 WFDC6Q9BQY6 131 aa2.19□□□□□ -2.06
CKS1BP1-201ENST00000555221 REG4Q9BYZ8 158 aa2.19□□□□□ -2.06
CKS1BP1-201ENST00000555221 BABAM2Q9NXR7 383 aa2.19□□□□□ -2.06
CKS1BP1-201ENST00000555221 RASL12Q9NYN1 266 aa2.19□□□□□ -2.06
CKS1BP1-201ENST00000555221 CKLFQ9UBR5 152 aa2.19□□□□□ -2.06
CKS1BP1-201ENST00000555221 ERGIC3Q9Y282 383 aa2.19□□□□□ -2.06
CKS1BP1-201ENST00000555221 TPRKBQ9Y3C4 175 aa2.19□□□□□ -2.06
CKS1BP1-201ENST00000555221 USF3Q68DE3 2245 aa2.19□□□□□ -2.06
CKS1BP1-201ENST00000555221 VWFP04275 2813 aa2.19□□□□□ -2.06
CKS1BP1-201ENST00000555221 CSPG4Q6UVK1 2322 aa2.18□□□□□ -2.06
CKS1BP1-201ENST00000555221 RYR2Q92736 4967 aa2.18□□□□□ -2.06
CKS1BP1-201ENST00000555221 FREM1Q5H8C1 2179 aa2.18□□□□□ -2.06
CKS1BP1-201ENST00000555221 TMEM212A6NML5 194 aa2.18□□□□□ -2.06
CKS1BP1-201ENST00000555221 ATP6V1G2-DDX39BF2Z307 99 aa2.18□□□□□ -2.06
CKS1BP1-201ENST00000555221 H0Y980 276 aa2.18□□□□□ -2.06
CKS1BP1-201ENST00000555221 RER1O15258 196 aa2.18□□□□□ -2.06
CKS1BP1-201ENST00000555221 NPYP01303 97 aa2.18□□□□□ -2.06
CKS1BP1-201ENST00000555221 IGKV1-16P04430 117 aa2.18□□□□□ -2.06
CKS1BP1-201ENST00000555221 HTR1AP08908 422 aa2.18□□□□□ -2.06
CKS1BP1-201ENST00000555221 ZNF728P0DKX0 622 aa2.18□□□□□ -2.06
CKS1BP1-201ENST00000555221 HINT1P49773 126 aaPredicted RBP2.18□□□□□ -2.06
CKS1BP1-201ENST00000555221 GNG3P63215 75 aa2.18□□□□□ -2.06
CKS1BP1-201ENST00000555221 CCL8P80075 99 aa2.18□□□□□ -2.06
CKS1BP1-201ENST00000555221 TMEM155Q4W5P6 130 aa2.18□□□□□ -2.06
CKS1BP1-201ENST00000555221 CLVS2Q5SYC1 327 aa2.18□□□□□ -2.06
CKS1BP1-201ENST00000555221 BCL2L15Q5TBC7 163 aa2.18□□□□□ -2.06
CKS1BP1-201ENST00000555221 C12orf73Q69YU5 71 aa2.18□□□□□ -2.06
CKS1BP1-201ENST00000555221 SLC36A1Q7Z2H8 476 aa2.18□□□□□ -2.06
CKS1BP1-201ENST00000555221 SPATA12Q7Z6I5 190 aa2.18□□□□□ -2.06
CKS1BP1-201ENST00000555221 LRRC28Q86X40 367 aaPredicted RBP2.18□□□□□ -2.06
CKS1BP1-201ENST00000555221 STX19Q8N4C7 294 aa2.18□□□□□ -2.06
CKS1BP1-201ENST00000555221 OR9Q1Q8NGQ5 310 aa2.18□□□□□ -2.06
CKS1BP1-201ENST00000555221 SLC25A40Q8TBP6 338 aa2.18□□□□□ -2.06
CKS1BP1-201ENST00000555221 SMCR5Q8TEV8 140 aa2.18□□□□□ -2.06
CKS1BP1-201ENST00000555221 NIPSNAP1Q9BPW8 284 aa2.18□□□□□ -2.06
CKS1BP1-201ENST00000555221 RTL8AQ9BWD3 113 aa2.18□□□□□ -2.06
CKS1BP1-201ENST00000555221 OR2J1Q9GZK6 312 aa2.18□□□□□ -2.06
CKS1BP1-201ENST00000555221 LHFPL6Q9Y693 200 aa2.18□□□□□ -2.06
CKS1BP1-201ENST00000555221 DCHS2Q6V1P9 2916 aa2.18□□□□□ -2.06
CKS1BP1-201ENST00000555221 DSCAMO60469 2012 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms