RNA–Protein interactions for RNA: ENST00000555038.5

ARHGEF40-204, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-204ENST00000555038 PRB4P10163 310 aaPredicted RBP16.33■□□□□ 0.2
ARHGEF40-204ENST00000555038 FAM104BQ5XKR9 115 aa16.33■□□□□ 0.2
ARHGEF40-204ENST00000555038 C9orf139Q6ZV77 190 aa16.33■□□□□ 0.2
ARHGEF40-204ENST00000555038 CNFNQ9BYD5 112 aa16.33■□□□□ 0.2
ARHGEF40-204ENST00000555038 LINC00527Q9UJ94 153 aa16.33■□□□□ 0.2
ARHGEF40-204ENST00000555038 TMSB15BA0A087X1C1 80 aa16.32■□□□□ 0.2
ARHGEF40-204ENST00000555038 IGHV3-66A0A0C4DH42 116 aa16.32■□□□□ 0.2
ARHGEF40-204ENST00000555038 PRAC2D3DTV9 90 aa16.32■□□□□ 0.2
ARHGEF40-204ENST00000555038 HIST1H1AQ02539 215 aaPredicted RBP16.32■□□□□ 0.2
ARHGEF40-204ENST00000555038 SPATA45Q537H7 98 aa16.32■□□□□ 0.2
ARHGEF40-204ENST00000555038 BBC3Q96PG8 261 aaPredicted RBP16.32■□□□□ 0.2
ARHGEF40-204ENST00000555038 A0A0G2JLM5 398 aa16.31■□□□□ 0.2
ARHGEF40-204ENST00000555038 J3QLI3 93 aa16.31■□□□□ 0.2
ARHGEF40-204ENST00000555038 LEPROTL1O95214 131 aa16.31■□□□□ 0.2
ARHGEF40-204ENST00000555038 ZNF138P52744 262 aa16.31■□□□□ 0.2
ARHGEF40-204ENST00000555038 TMEM78Q5T7P6 136 aa16.31■□□□□ 0.2
ARHGEF40-204ENST00000555038 ZNF705AQ6ZN79 300 aaPredicted RBP16.31■□□□□ 0.2
ARHGEF40-204ENST00000555038 C9orf47Q6ZRZ4 202 aa16.31■□□□□ 0.2
ARHGEF40-204ENST00000555038 RNF182Q8N6D2 247 aa16.31■□□□□ 0.2
ARHGEF40-204ENST00000555038 LINC01356Q8N9X3 169 aa16.31■□□□□ 0.2
ARHGEF40-204ENST00000555038 ERCC8Q13216 396 aa16.3■□□□□ 0.2
ARHGEF40-204ENST00000555038 PRR31Q5SQ13 230 aa16.3■□□□□ 0.2
ARHGEF40-204ENST00000555038 ZMAT5Q9UDW3 170 aaKnown RBP16.3■□□□□ 0.2
ARHGEF40-204ENST00000555038 HSPB8Q9UJY1 196 aa16.3■□□□□ 0.2
ARHGEF40-204ENST00000555038 LENEPQ9Y5L5 61 aa16.3■□□□□ 0.2
ARHGEF40-204ENST00000555038 ASH1LQ9NR48 2969 aaKnown RBP16.3■□□□□ 0.2
ARHGEF40-204ENST00000555038 M0QZ24 198 aa16.29■□□□□ 0.2
ARHGEF40-204ENST00000555038 ZNF207O43670 478 aaKnown RBP16.29■□□□□ 0.2
ARHGEF40-204ENST00000555038 IGLV1-40P01703 118 aa16.29■□□□□ 0.2
ARHGEF40-204ENST00000555038 SNHG12Q9BXW3 62 aa16.29■□□□□ 0.2
ARHGEF40-204ENST00000555038 AGPAT4-IT1Q9H0P7 198 aa16.29■□□□□ 0.2
ARHGEF40-204ENST00000555038 AP5S1Q9NUS5 200 aa16.29■□□□□ 0.2
ARHGEF40-204ENST00000555038 UQCR10Q9UDW1 63 aa16.29■□□□□ 0.2
ARHGEF40-204ENST00000555038 IGHV3OR16-13A0A075B7E8 117 aa16.28■□□□□ 0.2
ARHGEF40-204ENST00000555038 IGHV3-74A0A0B4J1X5 117 aa16.28■□□□□ 0.2
ARHGEF40-204ENST00000555038 ORM1P02763 201 aa16.28■□□□□ 0.2
ARHGEF40-204ENST00000555038 COX6B1P14854 86 aa16.28■□□□□ 0.2
ARHGEF40-204ENST00000555038 ORMDL3Q8N138 153 aa16.28■□□□□ 0.2
ARHGEF40-204ENST00000555038 PSMG3-AS1Q96PY0 264 aa16.28■□□□□ 0.2
ARHGEF40-204ENST00000555038 TRAV9-2A0A087WT02 112 aa16.28■□□□□ 0.2
ARHGEF40-204ENST00000555038 TMEM213A2RRL7 107 aa16.28■□□□□ 0.2
ARHGEF40-204ENST00000555038 EREGO14944 169 aa16.28■□□□□ 0.2
ARHGEF40-204ENST00000555038 C16orf92Q96LL3 132 aa16.28■□□□□ 0.2
ARHGEF40-204ENST00000555038 TMEM191AQ9H0A3 160 aa16.28■□□□□ 0.2
ARHGEF40-204ENST00000555038 SYS1-DBNDD2H3BUS1 97 aa16.27■□□□□ 0.2
ARHGEF40-204ENST00000555038 CFHR3Q02985 330 aa16.27■□□□□ 0.2
ARHGEF40-204ENST00000555038 IL17RELQ6ZVW7 336 aa16.27■□□□□ 0.2
ARHGEF40-204ENST00000555038 FA2HQ7L5A8 372 aa16.27■□□□□ 0.2
ARHGEF40-204ENST00000555038 SPTAN1Q13813 2472 aaKnown RBP16.26■□□□□ 0.19
ARHGEF40-204ENST00000555038 IGHV3-49A0A0A0MS15 119 aa16.26■□□□□ 0.19
ARHGEF40-204ENST00000555038 AVPP01185 164 aa16.26■□□□□ 0.19
ARHGEF40-204ENST00000555038 IGLC3P0DOY3 106 aa16.26■□□□□ 0.19
ARHGEF40-204ENST00000555038 PF4V1P10720 104 aa16.26■□□□□ 0.19
ARHGEF40-204ENST00000555038 BLCAPP62952 87 aa16.26■□□□□ 0.19
ARHGEF40-204ENST00000555038 TWIST1Q15672 202 aa16.26■□□□□ 0.19
ARHGEF40-204ENST00000555038 PET117Q6UWS5 81 aa16.26■□□□□ 0.19
ARHGEF40-204ENST00000555038 ZNF575Q86XF7 245 aa16.26■□□□□ 0.19
ARHGEF40-204ENST00000555038 PRSS3P2Q8NHM4 247 aa16.26■□□□□ 0.19
ARHGEF40-204ENST00000555038 D6R8Y8 96 aa16.26■□□□□ 0.19
ARHGEF40-204ENST00000555038 PRELID3AQ96N28 172 aa16.26■□□□□ 0.19
ARHGEF40-204ENST00000555038 MAP1LC3CQ9BXW4 147 aa16.26■□□□□ 0.19
ARHGEF40-204ENST00000555038 NPFFR1Q9GZQ6 430 aa16.26■□□□□ 0.19
ARHGEF40-204ENST00000555038 CHD6Q8TD26 2715 aa16.25■□□□□ 0.19
ARHGEF40-204ENST00000555038 A0A096LNT2 108 aa16.25■□□□□ 0.19
ARHGEF40-204ENST00000555038 A0A1B0GV90 55 aa16.25■□□□□ 0.19
ARHGEF40-204ENST00000555038 AMN1Q8IY45 258 aa16.25■□□□□ 0.19
ARHGEF40-204ENST00000555038 OR4X2Q8NGF9 303 aa16.25■□□□□ 0.19
ARHGEF40-204ENST00000555038 TMEM89A2RUT3 159 aa16.24■□□□□ 0.19
ARHGEF40-204ENST00000555038 TRBV12-3P01733 135 aa16.24■□□□□ 0.19
ARHGEF40-204ENST00000555038 PPBPP02775 128 aa16.24■□□□□ 0.19
ARHGEF40-204ENST00000555038 MRPL51Q4U2R6 128 aaKnown RBP16.24■□□□□ 0.19
ARHGEF40-204ENST00000555038 UNQ9165/PRO28630Q6UXU0 137 aa16.24■□□□□ 0.19
ARHGEF40-204ENST00000555038 OR10AG1Q8NH19 301 aa16.24■□□□□ 0.19
ARHGEF40-204ENST00000555038 OVOL1O14753 267 aa16.23■□□□□ 0.19
ARHGEF40-204ENST00000555038 PRB1P04280 392 aa16.23■□□□□ 0.19
ARHGEF40-204ENST00000555038 CSN3P07498 182 aa16.23■□□□□ 0.19
ARHGEF40-204ENST00000555038 LAMTOR2Q9Y2Q5 125 aa16.23■□□□□ 0.19
ARHGEF40-204ENST00000555038 LINC00477Q96M19 166 aa16.23■□□□□ 0.19
ARHGEF40-204ENST00000555038 KLK15Q9H2R5 256 aa16.23■□□□□ 0.19
ARHGEF40-204ENST00000555038 CSMD1Q96PZ7 3565 aa16.23■□□□□ 0.19
ARHGEF40-204ENST00000555038 USP9XQ93008 2570 aaPredicted RBP16.22■□□□□ 0.19
ARHGEF40-204ENST00000555038 SOCS3O14543 225 aa16.22■□□□□ 0.19
ARHGEF40-204ENST00000555038 SMAD7O15105 426 aaKnown RBP16.22■□□□□ 0.19
ARHGEF40-204ENST00000555038 K7EMT4 169 aa16.21■□□□□ 0.19
ARHGEF40-204ENST00000555038 CKS2P33552 79 aa16.21■□□□□ 0.19
ARHGEF40-204ENST00000555038 NUTF2P61970 127 aaKnown RBP16.21■□□□□ 0.19
ARHGEF40-204ENST00000555038 LOXL1Q08397 574 aaPredicted RBP16.21■□□□□ 0.19
ARHGEF40-204ENST00000555038 SPATA12Q7Z6I5 190 aa16.21■□□□□ 0.19
ARHGEF40-204ENST00000555038 LINC00469Q8N7U9 141 aa16.21■□□□□ 0.19
ARHGEF40-204ENST00000555038 ZNF738Q8NE65 137 aa16.21■□□□□ 0.19
ARHGEF40-204ENST00000555038 NRGNQ92686 78 aa16.21■□□□□ 0.19
ARHGEF40-204ENST00000555038 FAM208BQ5VWN6 2430 aa16.21■□□□□ 0.19
ARHGEF40-204ENST00000555038 IGKV3D-20A0A0C4DH25 116 aa16.21■□□□□ 0.18
ARHGEF40-204ENST00000555038 OR4C46A6NHA9 309 aa16.21■□□□□ 0.18
ARHGEF40-204ENST00000555038 SAMD13Q5VXD3 122 aa16.21■□□□□ 0.18
ARHGEF40-204ENST00000555038 GPHB5Q86YW7 130 aa16.21■□□□□ 0.18
ARHGEF40-204ENST00000555038 ZNF843Q8N446 348 aa16.21■□□□□ 0.18
ARHGEF40-204ENST00000555038 SIGLEC8Q9NYZ4 499 aa16.21■□□□□ 0.18
ARHGEF40-204ENST00000555038 IGHV7-4-1A0A0J9YVY3 117 aa16.2■□□□□ 0.18
ARHGEF40-204ENST00000555038 IGHV3-11P01762 117 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms