RNA–Protein interactions for RNA: ENST00000554756.1

RIPK3-204, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 1 (best)

Gene RIPK3, Length 1,758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-204ENST00000554756 SNURFLB1AK76 121 aa9.24□□□□□ -0.93
RIPK3-204ENST00000554756 K7EQM0 130 aa9.24□□□□□ -0.93
RIPK3-204ENST00000554756 IGLC2P0DOY2 106 aa9.24□□□□□ -0.93
RIPK3-204ENST00000554756 ADMP35318 185 aa9.24□□□□□ -0.93
RIPK3-204ENST00000554756 Q0VG73 95 aa9.24□□□□□ -0.93
RIPK3-204ENST00000554756 KLF5Q13887 457 aaPredicted RBP9.24□□□□□ -0.93
RIPK3-204ENST00000554756 JOSD1Q15040 202 aaPredicted RBP9.24□□□□□ -0.93
RIPK3-204ENST00000554756 USF2Q15853 346 aaPredicted RBP9.24□□□□□ -0.93
RIPK3-204ENST00000554756 Q56UQ5 140 aa9.24□□□□□ -0.93
RIPK3-204ENST00000554756 PDZD11Q5EBL8 140 aa9.24□□□□□ -0.93
RIPK3-204ENST00000554756 CMTM2Q8TAZ6 248 aa9.24□□□□□ -0.93
RIPK3-204ENST00000554756 ATP6V0BQ99437 205 aa9.24□□□□□ -0.93
RIPK3-204ENST00000554756 MCRIP2Q9BUT9 160 aaKnown RBP9.24□□□□□ -0.93
RIPK3-204ENST00000554756 NAT8BQ9UHF3 227 aa9.24□□□□□ -0.93
RIPK3-204ENST00000554756 FAM231BA6NCW3 169 aa9.24□□□□□ -0.93
RIPK3-204ENST00000554756 OR2T8A6NH00 312 aa9.24□□□□□ -0.93
RIPK3-204ENST00000554756 FBLL1A6NHQ2 334 aaKnown RBP9.24□□□□□ -0.93
RIPK3-204ENST00000554756 IL4P05112 153 aa9.24□□□□□ -0.93
RIPK3-204ENST00000554756 CBLN1P23435 193 aa9.24□□□□□ -0.93
RIPK3-204ENST00000554756 FAM209BQ5JX69 171 aa9.24□□□□□ -0.93
RIPK3-204ENST00000554756 TSKUQ8WUA8 353 aa9.24□□□□□ -0.93
RIPK3-204ENST00000554756 GFRA4Q9GZZ7 299 aa9.24□□□□□ -0.93
RIPK3-204ENST00000554756 ZNF586Q9NXT0 402 aa9.24□□□□□ -0.93
RIPK3-204ENST00000554756 IGHV3-35A0A0C4DH35 117 aa9.23□□□□□ -0.93
RIPK3-204ENST00000554756 F8W735 103 aaPredicted RBP9.23□□□□□ -0.93
RIPK3-204ENST00000554756 CRISP2P16562 243 aa9.23□□□□□ -0.93
RIPK3-204ENST00000554756 PAFAH1B2P68402 229 aa9.23□□□□□ -0.93
RIPK3-204ENST00000554756 TMEM75Q8N9X5 138 aa9.23□□□□□ -0.93
RIPK3-204ENST00000554756 NUDT10Q8NFP7 164 aa9.23□□□□□ -0.93
RIPK3-204ENST00000554756 OR4B1Q8NGF8 309 aa9.23□□□□□ -0.93
RIPK3-204ENST00000554756 NUDT11Q96G61 164 aa9.23□□□□□ -0.93
RIPK3-204ENST00000554756 LINC00479Q96M42 142 aa9.23□□□□□ -0.93
RIPK3-204ENST00000554756 ZNF331Q9NQX6 463 aaPredicted RBP9.23□□□□□ -0.93
RIPK3-204ENST00000554756 MRPS12O15235 138 aaKnown RBP9.22□□□□□ -0.93
RIPK3-204ENST00000554756 WIPF1O43516 503 aa9.22□□□□□ -0.93
RIPK3-204ENST00000554756 ZNF253O75346 499 aa9.22□□□□□ -0.93
RIPK3-204ENST00000554756 RPL7P18124 248 aaKnown RBP9.22□□□□□ -0.93
RIPK3-204ENST00000554756 GNG5P63218 68 aa9.22□□□□□ -0.93
RIPK3-204ENST00000554756 BEAN1Q3B7T3 259 aa9.22□□□□□ -0.93
RIPK3-204ENST00000554756 OR10J3Q5JRS4 329 aa9.22□□□□□ -0.93
RIPK3-204ENST00000554756 C9orf66Q5T8R8 295 aa9.22□□□□□ -0.93
RIPK3-204ENST00000554756 TMEM136Q6ZRR5 245 aa9.22□□□□□ -0.93
RIPK3-204ENST00000554756 Q86TA4 180 aa9.22□□□□□ -0.93
RIPK3-204ENST00000554756 ZFP30Q9Y2G7 519 aa9.22□□□□□ -0.93
RIPK3-204ENST00000554756 TRAV34A0A0B4J273 112 aa9.22□□□□□ -0.93
RIPK3-204ENST00000554756 C19orf71A6NCJ1 209 aa9.22□□□□□ -0.93
RIPK3-204ENST00000554756 A8MWL6 223 aa9.22□□□□□ -0.93
RIPK3-204ENST00000554756 SAP30O75446 220 aa9.22□□□□□ -0.93
RIPK3-204ENST00000554756 PRB2P02812 416 aaPredicted RBP9.22□□□□□ -0.93
RIPK3-204ENST00000554756 PSG9Q00887 426 aa9.22□□□□□ -0.93
RIPK3-204ENST00000554756 SIGLEC15Q6ZMC9 328 aa9.22□□□□□ -0.93
RIPK3-204ENST00000554756 OR9G4Q8NGQ1 327 aa9.22□□□□□ -0.93
RIPK3-204ENST00000554756 RPP21Q9H633 154 aaKnown RBP9.22□□□□□ -0.93
RIPK3-204ENST00000554756 WNK1Q9H4A3 2382 aa9.21□□□□□ -0.93
RIPK3-204ENST00000554756 NPIPB6E9PJ23 425 aa9.21□□□□□ -0.94
RIPK3-204ENST00000554756 LEMD1Q68G75 181 aa9.21□□□□□ -0.94
RIPK3-204ENST00000554756 AAMDCQ9H7C9 122 aa9.21□□□□□ -0.94
RIPK3-204ENST00000554756 P01737 135 aa9.2□□□□□ -0.94
RIPK3-204ENST00000554756 KRTAP10-11P60412 298 aa9.2□□□□□ -0.94
RIPK3-204ENST00000554756 DEFA6Q01524 100 aa9.2□□□□□ -0.94
RIPK3-204ENST00000554756 FAM106AQ4KMX7 169 aa9.2□□□□□ -0.94
RIPK3-204ENST00000554756 GPHB5Q86YW7 130 aa9.2□□□□□ -0.94
RIPK3-204ENST00000554756 NHLRC2Q8NBF2 726 aa9.2□□□□□ -0.94
RIPK3-204ENST00000554756 DAZAP1Q96EP5 407 aaKnown RBP9.2□□□□□ -0.94
RIPK3-204ENST00000554756 ZNF414Q96IQ9 312 aa9.2□□□□□ -0.94
RIPK3-204ENST00000554756 RABAC1Q9UI14 185 aa9.2□□□□□ -0.94
RIPK3-204ENST00000554756 CSN3P07498 182 aa9.19□□□□□ -0.94
RIPK3-204ENST00000554756 CTSGP08311 255 aa9.19□□□□□ -0.94
RIPK3-204ENST00000554756 EDN2P20800 178 aa9.19□□□□□ -0.94
RIPK3-204ENST00000554756 IQCJQ1A5X6 159 aa9.19□□□□□ -0.94
RIPK3-204ENST00000554756 KPRPQ5T749 579 aaPredicted RBP9.19□□□□□ -0.94
RIPK3-204ENST00000554756 UNQ9165/PRO28630Q6UXU0 137 aa9.19□□□□□ -0.94
RIPK3-204ENST00000554756 IGHV3OR16-8A0A075B7F1 116 aa9.19□□□□□ -0.94
RIPK3-204ENST00000554756 GZMBP10144 247 aa9.19□□□□□ -0.94
RIPK3-204ENST00000554756 CSN1S1P47710 185 aa9.19□□□□□ -0.94
RIPK3-204ENST00000554756 TCL1AP56279 114 aa9.19□□□□□ -0.94
RIPK3-204ENST00000554756 CTAG1AP78358 180 aa9.19□□□□□ -0.94
RIPK3-204ENST00000554756 PRR27Q6MZM9 219 aa9.19□□□□□ -0.94
RIPK3-204ENST00000554756 C16orf54Q6UWD8 224 aa9.19□□□□□ -0.94
RIPK3-204ENST00000554756 REC114Q7Z4M0 266 aa9.19□□□□□ -0.94
RIPK3-204ENST00000554756 NUP35Q8NFH5 326 aa9.19□□□□□ -0.94
RIPK3-204ENST00000554756 NEU1Q99519 415 aa9.19□□□□□ -0.94
RIPK3-204ENST00000554756 PEMTQ9UBM1 199 aa9.19□□□□□ -0.94
RIPK3-204ENST00000554756 RPH3ALQ9UNE2 315 aa9.19□□□□□ -0.94
RIPK3-204ENST00000554756 A0A1B0GXF2 115 aa9.18□□□□□ -0.94
RIPK3-204ENST00000554756 TSTD3H0UI37 97 aa9.18□□□□□ -0.94
RIPK3-204ENST00000554756 LGALS9O00182 355 aa9.18□□□□□ -0.94
RIPK3-204ENST00000554756 IGLV2-11P01706 119 aa9.18□□□□□ -0.94
RIPK3-204ENST00000554756 APCSP02743 223 aa9.18□□□□□ -0.94
RIPK3-204ENST00000554756 INSL3P51460 131 aa9.18□□□□□ -0.94
RIPK3-204ENST00000554756 PKIAP61925 76 aa9.18□□□□□ -0.94
RIPK3-204ENST00000554756 PSG3Q16557 428 aa9.18□□□□□ -0.94
RIPK3-204ENST00000554756 TM4SF20Q53R12 229 aa9.18□□□□□ -0.94
RIPK3-204ENST00000554756 MRPL54Q6P161 138 aaKnown RBP9.18□□□□□ -0.94
RIPK3-204ENST00000554756 GOLT1AQ6ZVE7 132 aa9.18□□□□□ -0.94
RIPK3-204ENST00000554756 BAGE3Q86Y29 109 aa9.18□□□□□ -0.94
RIPK3-204ENST00000554756 SELENOKQ9Y6D0 94 aa9.18□□□□□ -0.94
RIPK3-204ENST00000554756 C2orf70A6NJV1 201 aa9.17□□□□□ -0.94
RIPK3-204ENST00000554756 HIGD1CA8MV81 97 aa9.17□□□□□ -0.94
RIPK3-204ENST00000554756 DIRC3C9JPN6 131 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms