RNA–Protein interactions for RNA: ENST00000554673.5

ATXN3-230, Transcript of ataxin 3, humanhuman

TSL 5

Gene ATXN3, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-230ENST00000554673 GDF5OSQ5U4N7 250 aa4.36□□□□□ -1.71
ATXN3-230ENST00000554673 OR1L6Q8NGR2 347 aa4.36□□□□□ -1.71
ATXN3-230ENST00000554673 OR4F5Q8NH21 305 aa4.36□□□□□ -1.71
ATXN3-230ENST00000554673 BLNKQ8WV28 456 aa4.36□□□□□ -1.71
ATXN3-230ENST00000554673 OR4F4Q96R69 305 aa4.36□□□□□ -1.71
ATXN3-230ENST00000554673 RNF2Q99496 336 aa4.36□□□□□ -1.71
ATXN3-230ENST00000554673 VGLL1Q99990 258 aa4.36□□□□□ -1.71
ATXN3-230ENST00000554673 MLST8Q9BVC4 326 aa4.36□□□□□ -1.71
ATXN3-230ENST00000554673 SLC35B3Q9H1N7 401 aa4.36□□□□□ -1.71
ATXN3-230ENST00000554673 Q9H3A6 140 aa4.36□□□□□ -1.71
ATXN3-230ENST00000554673 KLF12Q9Y4X4 402 aa4.36□□□□□ -1.71
ATXN3-230ENST00000554673 ATRQ13535 2644 aa4.36□□□□□ -1.71
ATXN3-230ENST00000554673 TRRAPQ9Y4A5 3859 aa4.35□□□□□ -1.71
ATXN3-230ENST00000554673 IGHV7-4-1A0A0J9YVY3 117 aa4.35□□□□□ -1.71
ATXN3-230ENST00000554673 A0A1W2PRE2 83 aa4.35□□□□□ -1.71
ATXN3-230ENST00000554673 C7orf77A4D0Y5 90 aa4.35□□□□□ -1.71
ATXN3-230ENST00000554673 COLCA2A8K830 154 aa4.35□□□□□ -1.71
ATXN3-230ENST00000554673 A8MWP6 167 aa4.35□□□□□ -1.71
ATXN3-230ENST00000554673 F6UB75 175 aa4.35□□□□□ -1.71
ATXN3-230ENST00000554673 NDUFA4O00483 81 aa4.35□□□□□ -1.71
ATXN3-230ENST00000554673 HBE1P02100 147 aa4.35□□□□□ -1.71
ATXN3-230ENST00000554673 APOC3P02656 99 aa4.35□□□□□ -1.71
ATXN3-230ENST00000554673 CXCL1P09341 107 aa4.35□□□□□ -1.71
ATXN3-230ENST00000554673 ZNF705DP0CH99 300 aaPredicted RBP4.35□□□□□ -1.71
ATXN3-230ENST00000554673 ZNF705BP0CI00 300 aaPredicted RBP4.35□□□□□ -1.71
ATXN3-230ENST00000554673 HIST1H1EP10412 219 aaKnown RBP4.35□□□□□ -1.71
ATXN3-230ENST00000554673 S100A1P23297 94 aa4.35□□□□□ -1.71
ATXN3-230ENST00000554673 PSMB3P49720 205 aa4.35□□□□□ -1.71
ATXN3-230ENST00000554673 CNN1P51911 297 aaKnown RBP4.35□□□□□ -1.71
ATXN3-230ENST00000554673 SYNJ2BPP57105 145 aa4.35□□□□□ -1.71
ATXN3-230ENST00000554673 RANP62826 216 aaKnown RBP4.35□□□□□ -1.71
ATXN3-230ENST00000554673 PNRC1Q12796 327 aaPredicted RBP4.35□□□□□ -1.71
ATXN3-230ENST00000554673 ERCC8Q13216 396 aa4.35□□□□□ -1.71
ATXN3-230ENST00000554673 LINC01551Q86U37 167 aa4.35□□□□□ -1.71
ATXN3-230ENST00000554673 IL17DQ8TAD2 202 aa4.35□□□□□ -1.71
ATXN3-230ENST00000554673 DCANP1Q8TF63 244 aa4.35□□□□□ -1.71
ATXN3-230ENST00000554673 RPUSD4Q96CM3 377 aaKnown RBP4.35□□□□□ -1.71
ATXN3-230ENST00000554673 USMG5Q96IX5 58 aa4.35□□□□□ -1.71
ATXN3-230ENST00000554673 UBE2E2Q96LR5 201 aa4.35□□□□□ -1.71
ATXN3-230ENST00000554673 EIF5A2Q9GZV4 153 aaKnown RBP4.35□□□□□ -1.71
ATXN3-230ENST00000554673 ZNF331Q9NQX6 463 aaPredicted RBP4.35□□□□□ -1.71
ATXN3-230ENST00000554673 KCNIP2Q9NS61 270 aa4.35□□□□□ -1.71
ATXN3-230ENST00000554673 PEF1Q9UBV8 284 aaKnown RBP4.35□□□□□ -1.71
ATXN3-230ENST00000554673 SMPXQ9UHP9 88 aa4.35□□□□□ -1.71
ATXN3-230ENST00000554673 STAB1Q9NY15 2570 aa4.34□□□□□ -1.71
ATXN3-230ENST00000554673 TRAV30A0A087WSZ9 112 aa4.34□□□□□ -1.71
ATXN3-230ENST00000554673 A0A1W2PPV4 95 aa4.34□□□□□ -1.71
ATXN3-230ENST00000554673 PGPA6NDG6 321 aa4.34□□□□□ -1.71
ATXN3-230ENST00000554673 C2orf70A6NJV1 201 aa4.34□□□□□ -1.71
ATXN3-230ENST00000554673 KRBOX1C9JBD0 128 aa4.34□□□□□ -1.71
ATXN3-230ENST00000554673 F8W036 122 aa4.34□□□□□ -1.71
ATXN3-230ENST00000554673 TMEM250H0YL14 139 aa4.34□□□□□ -1.71
ATXN3-230ENST00000554673 TCRAP04437 139 aa4.34□□□□□ -1.71
ATXN3-230ENST00000554673 HNF1AP20823 631 aa4.34□□□□□ -1.71
ATXN3-230ENST00000554673 RPL35P42766 123 aaKnown RBP4.34□□□□□ -1.71
ATXN3-230ENST00000554673 BTN1A1Q13410 526 aa4.34□□□□□ -1.71
ATXN3-230ENST00000554673 IQCF2Q8IXL9 164 aa4.34□□□□□ -1.71
ATXN3-230ENST00000554673 OR10G8Q8NGN5 311 aa4.34□□□□□ -1.71
ATXN3-230ENST00000554673 OR1L4Q8NGR5 311 aa4.34□□□□□ -1.71
ATXN3-230ENST00000554673 Q8TAT8 98 aa4.34□□□□□ -1.71
ATXN3-230ENST00000554673 Q8WTZ3 238 aa4.34□□□□□ -1.71
ATXN3-230ENST00000554673 C4orf3Q8WVX3 66 aa4.34□□□□□ -1.71
ATXN3-230ENST00000554673 LINC00476Q8WZB0 136 aa4.34□□□□□ -1.71
ATXN3-230ENST00000554673 ISOC2Q96AB3 205 aa4.34□□□□□ -1.71
ATXN3-230ENST00000554673 FAM19A4Q96LR4 140 aa4.34□□□□□ -1.71
ATXN3-230ENST00000554673 TPPP3Q9BW30 176 aa4.34□□□□□ -1.71
ATXN3-230ENST00000554673 MANBALQ9NQG1 85 aa4.34□□□□□ -1.71
ATXN3-230ENST00000554673 PEX7O00628 323 aa4.33□□□□□ -1.72
ATXN3-230ENST00000554673 GGCTO75223 188 aaKnown RBP4.33□□□□□ -1.72
ATXN3-230ENST00000554673 NDUFS6O75380 124 aaKnown RBP4.33□□□□□ -1.72
ATXN3-230ENST00000554673 SCGB2A1O75556 95 aa4.33□□□□□ -1.72
ATXN3-230ENST00000554673 PFN1P07737 140 aaKnown RBP4.33□□□□□ -1.72
ATXN3-230ENST00000554673 RBMY1A1P0DJD3 496 aaKnown RBP4.33□□□□□ -1.72
ATXN3-230ENST00000554673 RBMY1CP0DJD4 496 aa4.33□□□□□ -1.72
ATXN3-230ENST00000554673 RAB31Q13636 194 aa4.33□□□□□ -1.72
ATXN3-230ENST00000554673 PEA15Q15121 130 aa4.33□□□□□ -1.72
ATXN3-230ENST00000554673 RBMY1FQ15415 496 aaKnown RBP4.33□□□□□ -1.72
ATXN3-230ENST00000554673 CENPWQ5EE01 88 aa4.33□□□□□ -1.72
ATXN3-230ENST00000554673 Q86TA4 180 aa4.33□□□□□ -1.72
ATXN3-230ENST00000554673 KLHL30-AS1Q8NEE0 82 aa4.33□□□□□ -1.72
ATXN3-230ENST00000554673 NARS2Q96I59 477 aaKnown RBP4.33□□□□□ -1.72
ATXN3-230ENST00000554673 PFDN5Q99471 154 aa4.33□□□□□ -1.72
ATXN3-230ENST00000554673 SPAG8Q99932 426 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-230ENST00000554673 C19orf24Q9BVV8 132 aa4.33□□□□□ -1.72
ATXN3-230ENST00000554673 RHPN1-AS1Q9BWJ2 59 aa4.33□□□□□ -1.72
ATXN3-230ENST00000554673 RABAC1Q9UI14 185 aa4.33□□□□□ -1.72
ATXN3-230ENST00000554673 EPDR1Q9UM22 224 aa4.33□□□□□ -1.72
ATXN3-230ENST00000554673 ARL2-SNX15V9GYD0 113 aa4.33□□□□□ -1.72
ATXN3-230ENST00000554673 V9GYV3 84 aa4.33□□□□□ -1.72
ATXN3-230ENST00000554673 C19orf71A6NCJ1 209 aa4.32□□□□□ -1.72
ATXN3-230ENST00000554673 K7EMT4 169 aa4.32□□□□□ -1.72
ATXN3-230ENST00000554673 K7EQG2 157 aa4.32□□□□□ -1.72
ATXN3-230ENST00000554673 LGALS9O00182 355 aa4.32□□□□□ -1.72
ATXN3-230ENST00000554673 CA1P00915 261 aaPredicted RBP4.32□□□□□ -1.72
ATXN3-230ENST00000554673 GCGP01275 180 aa4.32□□□□□ -1.72
ATXN3-230ENST00000554673 LTAP01374 205 aa4.32□□□□□ -1.72
ATXN3-230ENST00000554673 FOLR2P14207 255 aa4.32□□□□□ -1.72
ATXN3-230ENST00000554673 CBLN1P23435 193 aa4.32□□□□□ -1.72
ATXN3-230ENST00000554673 CEBPGP53567 150 aa4.32□□□□□ -1.72
ATXN3-230ENST00000554673 RPL19P84098 196 aaKnown RBP4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms