RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 RNASE3P12724 160 aaKnown RBP2.58□□□□□ -2
SEC23A-207ENST00000554615 GATA2P23769 480 aaPredicted RBP2.58□□□□□ -2
SEC23A-207ENST00000554615 GATA3P23771 443 aa2.58□□□□□ -2
SEC23A-207ENST00000554615 GNG5P63218 68 aa2.58□□□□□ -2
SEC23A-207ENST00000554615 DEFB109BQ30KR1 87 aa2.58□□□□□ -2
SEC23A-207ENST00000554615 SPINK9Q5DT21 86 aa2.58□□□□□ -2
SEC23A-207ENST00000554615 Q5PR19 223 aa2.58□□□□□ -2
SEC23A-207ENST00000554615 C10orf55Q5SWW7 151 aa2.58□□□□□ -2
SEC23A-207ENST00000554615 FAM180AQ6UWF9 173 aa2.58□□□□□ -2
SEC23A-207ENST00000554615 ZFP2Q6ZN57 461 aa2.58□□□□□ -2
SEC23A-207ENST00000554615 LINC00612Q8N6U2 182 aa2.58□□□□□ -2
SEC23A-207ENST00000554615 R4GN57 208 aa2.58□□□□□ -2
SEC23A-207ENST00000554615 ZNF705GA8MUZ8 300 aaPredicted RBP2.58□□□□□ -2
SEC23A-207ENST00000554615 M0QZ24 198 aa2.58□□□□□ -2
SEC23A-207ENST00000554615 TCF21O43680 179 aa2.58□□□□□ -2
SEC23A-207ENST00000554615 TIMM17BO60830 172 aa2.58□□□□□ -2
SEC23A-207ENST00000554615 ATP5LO75964 103 aa2.58□□□□□ -2
SEC23A-207ENST00000554615 CD7P09564 240 aa2.58□□□□□ -2
SEC23A-207ENST00000554615 RPL7P18124 248 aaKnown RBP2.58□□□□□ -2
SEC23A-207ENST00000554615 KLRB1Q12918 225 aa2.58□□□□□ -2
SEC23A-207ENST00000554615 PRR9Q5T870 116 aa2.58□□□□□ -2
SEC23A-207ENST00000554615 C12orf54Q6X4T0 127 aa2.58□□□□□ -2
SEC23A-207ENST00000554615 C20orf173Q96LM9 149 aa2.58□□□□□ -2
SEC23A-207ENST00000554615 C8orf49Q96NF6 230 aa2.58□□□□□ -2
SEC23A-207ENST00000554615 TIMM21Q9BVV7 248 aa2.58□□□□□ -2
SEC23A-207ENST00000554615 PRO1933Q9H354 126 aa2.58□□□□□ -2
SEC23A-207ENST00000554615 GOLT1BQ9Y3E0 138 aa2.58□□□□□ -2
SEC23A-207ENST00000554615 MALRD1Q5VYJ5 2156 aa2.58□□□□□ -2
SEC23A-207ENST00000554615 A0A0J9YXY3 114 aa2.57□□□□□ -2
SEC23A-207ENST00000554615 J3QLI3 93 aa2.57□□□□□ -2
SEC23A-207ENST00000554615 ENSAO43768 121 aaKnown RBP2.57□□□□□ -2
SEC23A-207ENST00000554615 P01737 135 aa2.57□□□□□ -2
SEC23A-207ENST00000554615 HBDP02042 147 aa2.57□□□□□ -2
SEC23A-207ENST00000554615 CSN3P07498 182 aa2.57□□□□□ -2
SEC23A-207ENST00000554615 CD3EP07766 207 aa2.57□□□□□ -2
SEC23A-207ENST00000554615 BMI1P35226 326 aa2.57□□□□□ -2
SEC23A-207ENST00000554615 MAJINQ3KP22 176 aa2.57□□□□□ -2
SEC23A-207ENST00000554615 LCE2CQ5TA81 110 aa2.57□□□□□ -2
SEC23A-207ENST00000554615 C2orf82Q6UX34 121 aa2.57□□□□□ -2
SEC23A-207ENST00000554615 DEFB108BQ8NET1 73 aa2.57□□□□□ -2
SEC23A-207ENST00000554615 RASL10AQ92737 203 aa2.57□□□□□ -2
SEC23A-207ENST00000554615 LINC00477Q96M19 166 aa2.57□□□□□ -2
SEC23A-207ENST00000554615 SSBP3Q9BWW4 388 aaPredicted RBP2.57□□□□□ -2
SEC23A-207ENST00000554615 MDFICQ9P1T7 246 aa2.57□□□□□ -2
SEC23A-207ENST00000554615 FZR1Q9UM11 496 aa2.57□□□□□ -2
SEC23A-207ENST00000554615 F5P12259 2224 aa2.57□□□□□ -2
SEC23A-207ENST00000554615 MUC4Q99102 2169 aa2.57□□□□□ -2
SEC23A-207ENST00000554615 SPAARA0A1B0GVQ0 90 aa2.57□□□□□ -2
SEC23A-207ENST00000554615 OR4C46A6NHA9 309 aa2.57□□□□□ -2
SEC23A-207ENST00000554615 C11orf86A6NJI1 115 aa2.57□□□□□ -2
SEC23A-207ENST00000554615 FAM106CPP0CH98 169 aa2.57□□□□□ -2
SEC23A-207ENST00000554615 HTR1DP28221 377 aa2.57□□□□□ -2
SEC23A-207ENST00000554615 EFNA4P52798 201 aa2.57□□□□□ -2
SEC23A-207ENST00000554615 FHL3Q13643 280 aa2.57□□□□□ -2
SEC23A-207ENST00000554615 FAM106AQ4KMX7 169 aa2.57□□□□□ -2
SEC23A-207ENST00000554615 CST9LP1Q5W188 147 aa2.57□□□□□ -2
SEC23A-207ENST00000554615 C10orf105Q8TEF2 133 aa2.57□□□□□ -2
SEC23A-207ENST00000554615 CELSR1Q9NYQ6 3014 aa2.57□□□□□ -2
SEC23A-207ENST00000554615 ALMS1Q8TCU4 4167 aa2.57□□□□□ -2
SEC23A-207ENST00000554615 FRAS1Q86XX4 4008 aa2.57□□□□□ -2
SEC23A-207ENST00000554615 DNAH2Q9P225 4427 aa2.57□□□□□ -2
SEC23A-207ENST00000554615 FAM90A27PA6NNH2 459 aa2.57□□□□□ -2
SEC23A-207ENST00000554615 OVOL1O14753 267 aa2.57□□□□□ -2
SEC23A-207ENST00000554615 RD3LP0DJH9 198 aa2.57□□□□□ -2
SEC23A-207ENST00000554615 FXYD3Q14802 87 aa2.57□□□□□ -2
SEC23A-207ENST00000554615 ORMDL3Q8N138 153 aa2.57□□□□□ -2
SEC23A-207ENST00000554615 TMEM86BQ8N661 226 aa2.57□□□□□ -2
SEC23A-207ENST00000554615 UBALD1Q8TB05 177 aa2.57□□□□□ -2
SEC23A-207ENST00000554615 IFI27L1Q96BM0 104 aa2.57□□□□□ -2
SEC23A-207ENST00000554615 SVEP1Q4LDE5 3571 aa2.57□□□□□ -2
SEC23A-207ENST00000554615 ATMQ13315 3056 aa2.56□□□□□ -2
SEC23A-207ENST00000554615 TMEM213A2RRL7 107 aa2.56□□□□□ -2
SEC23A-207ENST00000554615 PRRG2O14669 202 aa2.56□□□□□ -2
SEC23A-207ENST00000554615 MRPS36P82909 103 aaKnown RBP2.56□□□□□ -2
SEC23A-207ENST00000554615 EDDM3AQ14507 147 aa2.56□□□□□ -2
SEC23A-207ENST00000554615 ANXA2RQ3ZCQ2 193 aa2.56□□□□□ -2
SEC23A-207ENST00000554615 LYZL1Q6UWQ5 148 aa2.56□□□□□ -2
SEC23A-207ENST00000554615 LINC01561Q8N1V8 128 aa2.56□□□□□ -2
SEC23A-207ENST00000554615 CNEP1R1Q8N9A8 125 aa2.56□□□□□ -2
SEC23A-207ENST00000554615 TMEM160Q9NX00 188 aa2.56□□□□□ -2
SEC23A-207ENST00000554615 CSDC2Q9Y534 153 aaKnown RBP2.56□□□□□ -2
SEC23A-207ENST00000554615 ZGRF1Q86YA3 2104 aa2.56□□□□□ -2
SEC23A-207ENST00000554615 ZNF292O60281 2723 aa2.56□□□□□ -2
SEC23A-207ENST00000554615 SDHAF1A6NFY7 115 aa2.56□□□□□ -2
SEC23A-207ENST00000554615 LEPROTL1O95214 131 aa2.56□□□□□ -2
SEC23A-207ENST00000554615 NPYP01303 97 aa2.56□□□□□ -2
SEC23A-207ENST00000554615 P0DMU3 169 aa2.56□□□□□ -2
SEC23A-207ENST00000554615 FAM231AP0DMU4 169 aa2.56□□□□□ -2
SEC23A-207ENST00000554615 FAM231CP0DMU5 169 aa2.56□□□□□ -2
SEC23A-207ENST00000554615 DSCR9P59020 149 aa2.56□□□□□ -2
SEC23A-207ENST00000554615 RHOHQ15669 191 aa2.56□□□□□ -2
SEC23A-207ENST00000554615 ZNF876PQ49A33 203 aa2.56□□□□□ -2
SEC23A-207ENST00000554615 LCN12Q6JVE5 192 aa2.56□□□□□ -2
SEC23A-207ENST00000554615 SLC25A24Q6NUK1 477 aa2.56□□□□□ -2
SEC23A-207ENST00000554615 RASL11BQ9BPW5 248 aa2.56□□□□□ -2
SEC23A-207ENST00000554615 SPANXDQ9BXN6 97 aa2.56□□□□□ -2
SEC23A-207ENST00000554615 AGPAT4-IT1Q9H0P7 198 aa2.56□□□□□ -2
SEC23A-207ENST00000554615 SPANXCQ9NY87 97 aa2.56□□□□□ -2
SEC23A-207ENST00000554615 DNAH10Q8IVF4 4471 aa2.56□□□□□ -2
SEC23A-207ENST00000554615 LYSTQ99698 3801 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms