RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 RBKSQ9H477 322 aa4.45□□□□□ -1.7
ATXN3-224ENST00000554040 MGAT4CQ9UBM8 478 aa4.45□□□□□ -1.7
ATXN3-224ENST00000554040 HSPB7Q9UBY9 170 aa4.45□□□□□ -1.7
ATXN3-224ENST00000554040 TRGV4A0A0C4DH28 118 aa4.44□□□□□ -1.7
ATXN3-224ENST00000554040 LINC00854A0A1B0GVQ3 168 aa4.44□□□□□ -1.7
ATXN3-224ENST00000554040 CRYM-AS1A6NIL9 109 aa4.44□□□□□ -1.7
ATXN3-224ENST00000554040 MRPS12O15235 138 aaKnown RBP4.44□□□□□ -1.7
ATXN3-224ENST00000554040 SLC25A5P05141 298 aaKnown RBP4.44□□□□□ -1.7
ATXN3-224ENST00000554040 CXCL2P19875 107 aa4.44□□□□□ -1.7
ATXN3-224ENST00000554040 RAB11AP62491 216 aa4.44□□□□□ -1.7
ATXN3-224ENST00000554040 LAGE3Q14657 143 aa4.44□□□□□ -1.7
ATXN3-224ENST00000554040 C9orf47Q6ZRZ4 202 aa4.44□□□□□ -1.7
ATXN3-224ENST00000554040 SAMD12Q8N8I0 201 aa4.44□□□□□ -1.7
ATXN3-224ENST00000554040 ZBTB8BQ8NAP8 495 aaPredicted RBP4.44□□□□□ -1.7
ATXN3-224ENST00000554040 OR13C8Q8NGS7 320 aa4.44□□□□□ -1.7
ATXN3-224ENST00000554040 TERB2Q8NHR7 220 aa4.44□□□□□ -1.7
ATXN3-224ENST00000554040 NAA60Q9H7X0 242 aa4.44□□□□□ -1.7
ATXN3-224ENST00000554040 ZNF331Q9NQX6 463 aaPredicted RBP4.44□□□□□ -1.7
ATXN3-224ENST00000554040 MRPL16Q9NX20 251 aaKnown RBP4.44□□□□□ -1.7
ATXN3-224ENST00000554040 HIGD1AQ9Y241 93 aa4.44□□□□□ -1.7
ATXN3-224ENST00000554040 TRAV8-6A0A0B4J262 113 aa4.43□□□□□ -1.7
ATXN3-224ENST00000554040 LOC100506127A0A0U1RQW1 187 aa4.43□□□□□ -1.7
ATXN3-224ENST00000554040 RNF222A6NCQ9 220 aa4.43□□□□□ -1.7
ATXN3-224ENST00000554040 PGPEP1LA6NFU8 196 aa4.43□□□□□ -1.7
ATXN3-224ENST00000554040 HYPMO75409 117 aa4.43□□□□□ -1.7
ATXN3-224ENST00000554040 CCNKO75909 580 aa4.43□□□□□ -1.7
ATXN3-224ENST00000554040 TNFAIP8O95379 198 aa4.43□□□□□ -1.7
ATXN3-224ENST00000554040 IGHV3-30P01768 117 aa4.43□□□□□ -1.7
ATXN3-224ENST00000554040 IGHV3-33P01772 117 aa4.43□□□□□ -1.7
ATXN3-224ENST00000554040 CD3DP04234 171 aa4.43□□□□□ -1.7
ATXN3-224ENST00000554040 IGHV3-30-3P0DP02 117 aa4.43□□□□□ -1.7
ATXN3-224ENST00000554040 IGHV3-30-5P0DP03 117 aa4.43□□□□□ -1.7
ATXN3-224ENST00000554040 CCR6P51684 374 aa4.43□□□□□ -1.7
ATXN3-224ENST00000554040 AQP4P55087 323 aa4.43□□□□□ -1.7
ATXN3-224ENST00000554040 RNASE10Q5GAN6 216 aaKnown RBP4.43□□□□□ -1.7
ATXN3-224ENST00000554040 IBA57Q5T440 356 aaKnown RBP4.43□□□□□ -1.7
ATXN3-224ENST00000554040 SH2D6Q7Z4S9 175 aa4.43□□□□□ -1.7
ATXN3-224ENST00000554040 SNX29P2Q8IUI4 249 aa4.43□□□□□ -1.7
ATXN3-224ENST00000554040 Q8N976 141 aa4.43□□□□□ -1.7
ATXN3-224ENST00000554040 BAALCQ8WXS3 180 aa4.43□□□□□ -1.7
ATXN3-224ENST00000554040 RTBDNQ9BSG5 229 aaPredicted RBP4.43□□□□□ -1.7
ATXN3-224ENST00000554040 SLC25A31Q9H0C2 315 aa4.43□□□□□ -1.7
ATXN3-224ENST00000554040 BLOC1S6Q9UL45 172 aa4.43□□□□□ -1.7
ATXN3-224ENST00000554040 TRAV8-3A0A0A6YYJ7 113 aa4.42□□□□□ -1.7
ATXN3-224ENST00000554040 SMIM31A0A1B0GVY4 71 aa4.42□□□□□ -1.7
ATXN3-224ENST00000554040 C7orf71A4D174 169 aa4.42□□□□□ -1.7
ATXN3-224ENST00000554040 PMS2P5A8MQ11 134 aa4.42□□□□□ -1.7
ATXN3-224ENST00000554040 C9JCJ5 164 aa4.42□□□□□ -1.7
ATXN3-224ENST00000554040 IL5P05113 134 aa4.42□□□□□ -1.7
ATXN3-224ENST00000554040 SFTA3P0C7M3 94 aa4.42□□□□□ -1.7
ATXN3-224ENST00000554040 ANXA7P20073 488 aaKnown RBP4.42□□□□□ -1.7
ATXN3-224ENST00000554040 PPT1P50897 306 aa4.42□□□□□ -1.7
ATXN3-224ENST00000554040 PLP1P60201 277 aa4.42□□□□□ -1.7
ATXN3-224ENST00000554040 ZNF846Q147U1 533 aa4.42□□□□□ -1.7
ATXN3-224ENST00000554040 SMCO1Q147U7 214 aa4.42□□□□□ -1.7
ATXN3-224ENST00000554040 SCGB2B2Q4G0G5 96 aa4.42□□□□□ -1.7
ATXN3-224ENST00000554040 LCN15Q6UWW0 184 aa4.42□□□□□ -1.7
ATXN3-224ENST00000554040 ACOT7LQ6ZUV0 252 aa4.42□□□□□ -1.7
ATXN3-224ENST00000554040 S100A7AQ86SG5 101 aa4.42□□□□□ -1.7
ATXN3-224ENST00000554040 CROCCP3Q8IVE0 287 aa4.42□□□□□ -1.7
ATXN3-224ENST00000554040 MARCH1Q8TCQ1 289 aa4.42□□□□□ -1.7
ATXN3-224ENST00000554040 ZNF479Q96JC4 524 aa4.42□□□□□ -1.7
ATXN3-224ENST00000554040 SLC50A1Q9BRV3 221 aa4.42□□□□□ -1.7
ATXN3-224ENST00000554040 PAIP2BQ9ULR5 123 aaKnown RBP4.42□□□□□ -1.7
ATXN3-224ENST00000554040 TP53TG3Q9ULZ0 132 aa4.42□□□□□ -1.7
ATXN3-224ENST00000554040 KLLNB2CW77 178 aa4.41□□□□□ -1.7
ATXN3-224ENST00000554040 PRSS46E5RG02 174 aa4.41□□□□□ -1.7
ATXN3-224ENST00000554040 MPDU1O75352 247 aa4.41□□□□□ -1.7
ATXN3-224ENST00000554040 MBPP02686 304 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-224ENST00000554040 SNRPCP09234 159 aaKnown RBP4.41□□□□□ -1.7
ATXN3-224ENST00000554040 OR5G3P0C626 314 aa4.41□□□□□ -1.7
ATXN3-224ENST00000554040 AKR1C4P17516 323 aa4.41□□□□□ -1.7
ATXN3-224ENST00000554040 RNASE4P34096 147 aaKnown RBP4.41□□□□□ -1.7
ATXN3-224ENST00000554040 CD300CQ08708 224 aa4.41□□□□□ -1.7
ATXN3-224ENST00000554040 BTN1A1Q13410 526 aa4.41□□□□□ -1.7
ATXN3-224ENST00000554040 OR10J3Q5JRS4 329 aa4.41□□□□□ -1.7
ATXN3-224ENST00000554040 LCE1EQ5T753 118 aa4.41□□□□□ -1.7
ATXN3-224ENST00000554040 LELP1Q5T871 98 aa4.41□□□□□ -1.7
ATXN3-224ENST00000554040 CYP2G1PQ6ZSU1 146 aa4.41□□□□□ -1.7
ATXN3-224ENST00000554040 OR10G4Q8NGN3 311 aa4.41□□□□□ -1.7
ATXN3-224ENST00000554040 RASL10AQ92737 203 aa4.41□□□□□ -1.7
ATXN3-224ENST00000554040 C14orf166Q9Y224 244 aaKnown RBP4.41□□□□□ -1.7
ATXN3-224ENST00000554040 RNF24Q9Y225 148 aa4.41□□□□□ -1.7
ATXN3-224ENST00000554040 A0A0B4J2A0 478 aa4.4□□□□□ -1.71
ATXN3-224ENST00000554040 LOC100131303A0A0U1RQF7 123 aa4.4□□□□□ -1.71
ATXN3-224ENST00000554040 SLC17A3O00476 420 aa4.4□□□□□ -1.71
ATXN3-224ENST00000554040 PFN1P07737 140 aaKnown RBP4.4□□□□□ -1.71
ATXN3-224ENST00000554040 IAPPP10997 89 aa4.4□□□□□ -1.71
ATXN3-224ENST00000554040 TBPP20226 339 aa4.4□□□□□ -1.71
ATXN3-224ENST00000554040 GABARAPL2P60520 117 aa4.4□□□□□ -1.71
ATXN3-224ENST00000554040 SELENOTP62341 195 aa4.4□□□□□ -1.71
ATXN3-224ENST00000554040 RPP30P78346 268 aaKnown RBP4.4□□□□□ -1.71
ATXN3-224ENST00000554040 AKR1C1Q04828 323 aa4.4□□□□□ -1.71
ATXN3-224ENST00000554040 PATE2Q6UY27 113 aa4.4□□□□□ -1.71
ATXN3-224ENST00000554040 LYZL2Q7Z4W2 148 aa4.4□□□□□ -1.71
ATXN3-224ENST00000554040 NHLRC2Q8NBF2 726 aa4.4□□□□□ -1.71
ATXN3-224ENST00000554040 OR10P1Q8NGE3 313 aa4.4□□□□□ -1.71
ATXN3-224ENST00000554040 OR4D10Q8NGI6 311 aa4.4□□□□□ -1.71
ATXN3-224ENST00000554040 SAT2Q96F10 170 aaPredicted RBP4.4□□□□□ -1.71
ATXN3-224ENST00000554040 FAM19A4Q96LR4 140 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms