RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 NIPSNAP3BQ9BS92 247 aa14.51□□□□□ -0.09
FOXA1-203ENST00000553751 Q9H3A6 140 aa14.51□□□□□ -0.09
FOXA1-203ENST00000553751 PLA2G2EQ9NZK7 142 aa14.51□□□□□ -0.09
FOXA1-203ENST00000553751 APLNQ9ULZ1 77 aa14.51□□□□□ -0.09
FOXA1-203ENST00000553751 PQLC2Q6ZP29 291 aa14.5□□□□□ -0.09
FOXA1-203ENST00000553751 VGLL1Q99990 258 aa14.5□□□□□ -0.09
FOXA1-203ENST00000553751 IGHV4-4A0A075B6R2 117 aa14.49□□□□□ -0.09
FOXA1-203ENST00000553751 SMLR1H3BR10 107 aa14.49□□□□□ -0.09
FOXA1-203ENST00000553751 HTN1P15515 57 aa14.49□□□□□ -0.09
FOXA1-203ENST00000553751 CDC34P49427 236 aaPredicted RBP14.49□□□□□ -0.09
FOXA1-203ENST00000553751 SERF2P84101 59 aa14.49□□□□□ -0.09
FOXA1-203ENST00000553751 C16orf74Q96GX8 76 aa14.49□□□□□ -0.09
FOXA1-203ENST00000553751 BORCS7-ASMTA0A0B4J1R7 106 aa14.48□□□□□ -0.09
FOXA1-203ENST00000553751 LYRM9A8MSI8 78 aa14.48□□□□□ -0.09
FOXA1-203ENST00000553751 KLLNB2CW77 178 aa14.48□□□□□ -0.09
FOXA1-203ENST00000553751 HMGB3O15347 200 aaKnown RBP14.48□□□□□ -0.09
FOXA1-203ENST00000553751 ARPC5O15511 151 aa14.48□□□□□ -0.09
FOXA1-203ENST00000553751 CRISP2P16562 243 aa14.48□□□□□ -0.09
FOXA1-203ENST00000553751 RNASE8Q8TDE3 154 aaKnown RBP14.48□□□□□ -0.09
FOXA1-203ENST00000553751 TRAV12-3A0A0B4J271 114 aa14.47□□□□□ -0.09
FOXA1-203ENST00000553751 SLC25A5P05141 298 aaKnown RBP14.47□□□□□ -0.09
FOXA1-203ENST00000553751 STAG3L2P0CL84 134 aa14.47□□□□□ -0.09
FOXA1-203ENST00000553751 STAG3L3P0CL85 134 aa14.47□□□□□ -0.09
FOXA1-203ENST00000553751 ARL14EPLP0DKL9 152 aa14.47□□□□□ -0.09
FOXA1-203ENST00000553751 TMEM78Q5T7P6 136 aa14.47□□□□□ -0.09
FOXA1-203ENST00000553751 LGALS9CQ6DKI2 356 aa14.47□□□□□ -0.09
FOXA1-203ENST00000553751 TMEM263Q8WUH6 116 aaKnown RBP14.47□□□□□ -0.09
FOXA1-203ENST00000553751 GNPNAT1Q96EK6 184 aaPredicted RBP14.47□□□□□ -0.09
FOXA1-203ENST00000553751 KMT2AQ03164 3969 aa14.47□□□□□ -0.09
FOXA1-203ENST00000553751 VPS13DQ5THJ4 4388 aa14.46□□□□□ -0.09
FOXA1-203ENST00000553751 C7orf71A4D174 169 aa14.46□□□□□ -0.09
FOXA1-203ENST00000553751 RBAKDNA6NC62 111 aa14.46□□□□□ -0.09
FOXA1-203ENST00000553751 MBP02144 154 aa14.46□□□□□ -0.09
FOXA1-203ENST00000553751 CSN1S1P47710 185 aa14.46□□□□□ -0.09
FOXA1-203ENST00000553751 DAD1P61803 113 aa14.46□□□□□ -0.09
FOXA1-203ENST00000553751 ZNF493Q6ZR52 646 aa14.46□□□□□ -0.09
FOXA1-203ENST00000553751 RAB24Q969Q5 203 aa14.46□□□□□ -0.09
FOXA1-203ENST00000553751 OTORQ9NRC9 128 aa14.46□□□□□ -0.09
FOXA1-203ENST00000553751 ZNF492Q9P255 531 aa14.46□□□□□ -0.09
FOXA1-203ENST00000553751 DIRC3C9JPN6 131 aa14.45□□□□□ -0.1
FOXA1-203ENST00000553751 CD300CQ08708 224 aa14.45□□□□□ -0.1
FOXA1-203ENST00000553751 BTN1A1Q13410 526 aa14.45□□□□□ -0.1
FOXA1-203ENST00000553751 PRR9Q5T870 116 aa14.45□□□□□ -0.1
FOXA1-203ENST00000553751 ZFAND2AQ8N6M9 145 aa14.45□□□□□ -0.1
FOXA1-203ENST00000553751 Q8TAT8 98 aa14.45□□□□□ -0.1
FOXA1-203ENST00000553751 TAAR5O14804 337 aa14.44□□□□□ -0.1
FOXA1-203ENST00000553751 NMBP08949 121 aa14.44□□□□□ -0.1
FOXA1-203ENST00000553751 ZNF138P52744 262 aa14.44□□□□□ -0.1
FOXA1-203ENST00000553751 SSX7Q7RTT5 188 aa14.44□□□□□ -0.1
FOXA1-203ENST00000553751 RXFP4Q8TDU9 374 aa14.44□□□□□ -0.1
FOXA1-203ENST00000553751 HYLS1Q96M11 299 aa14.44□□□□□ -0.1
FOXA1-203ENST00000553751 PYGO2Q9BRQ0 406 aa14.44□□□□□ -0.1
FOXA1-203ENST00000553751 CYTL1Q9NRR1 136 aa14.44□□□□□ -0.1
FOXA1-203ENST00000553751 TRBV7-9A0A0J9YWB2 115 aa14.43□□□□□ -0.1
FOXA1-203ENST00000553751 ZNF324O75467 553 aaPredicted RBP14.43□□□□□ -0.1
FOXA1-203ENST00000553751 GPX1P07203 203 aa14.43□□□□□ -0.1
FOXA1-203ENST00000553751 RNASE4P34096 147 aaKnown RBP14.43□□□□□ -0.1
FOXA1-203ENST00000553751 SUN5Q8TC36 379 aa14.43□□□□□ -0.1
FOXA1-203ENST00000553751 TIMM8BQ9Y5J9 83 aaPredicted RBP14.43□□□□□ -0.1
FOXA1-203ENST00000553751 PGPA6NDG6 321 aa14.42□□□□□ -0.1
FOXA1-203ENST00000553751 DEFB130BP0DP73 79 aa14.42□□□□□ -0.1
FOXA1-203ENST00000553751 DEFB130AP0DP74 79 aa14.42□□□□□ -0.1
FOXA1-203ENST00000553751 HTN3P15516 51 aa14.42□□□□□ -0.1
FOXA1-203ENST00000553751 GCHFRP30047 84 aa14.42□□□□□ -0.1
FOXA1-203ENST00000553751 ZNF345Q14585 488 aa14.42□□□□□ -0.1
FOXA1-203ENST00000553751 CCDC28AQ8IWP9 274 aa14.42□□□□□ -0.1
FOXA1-203ENST00000553751 OR11H4Q8NGC9 324 aa14.42□□□□□ -0.1
FOXA1-203ENST00000553751 CMTM2Q8TAZ6 248 aa14.42□□□□□ -0.1
FOXA1-203ENST00000553751 NDUFAF3Q9BU61 184 aa14.42□□□□□ -0.1
FOXA1-203ENST00000553751 ACTR3CQ9C0K3 210 aaPredicted RBP14.42□□□□□ -0.1
FOXA1-203ENST00000553751 NOP10Q9NPE3 64 aaKnown RBP14.42□□□□□ -0.1
FOXA1-203ENST00000553751 ZNF726P1Q15940 193 aa14.41□□□□□ -0.1
FOXA1-203ENST00000553751 FAM74A1Q5RGS3 127 aa14.41□□□□□ -0.1
FOXA1-203ENST00000553751 LINC00467Q9BRT7 94 aa14.41□□□□□ -0.1
FOXA1-203ENST00000553751 Q6ZQT7 251 aa14.4□□□□□ -0.1
FOXA1-203ENST00000553751 KCNRGQ8N5I3 272 aa14.4□□□□□ -0.1
FOXA1-203ENST00000553751 ARL6IP6Q8N6S5 226 aa14.4□□□□□ -0.1
FOXA1-203ENST00000553751 TMED6Q8WW62 240 aa14.4□□□□□ -0.1
FOXA1-203ENST00000553751 FAM210BQ96KR6 192 aa14.4□□□□□ -0.1
FOXA1-203ENST00000553751 RPH3ALQ9UNE2 315 aa14.4□□□□□ -0.1
FOXA1-203ENST00000553751 EPPK1P58107 5090 aaKnown RBP14.39□□□□□ -0.11
FOXA1-203ENST00000553751 HMSDA8MTL9 139 aa14.39□□□□□ -0.11
FOXA1-203ENST00000553751 CXorf1O96002 111 aa14.39□□□□□ -0.11
FOXA1-203ENST00000553751 GNG5P63218 68 aa14.39□□□□□ -0.11
FOXA1-203ENST00000553751 ST6GAL2Q96JF0 529 aa14.39□□□□□ -0.11
FOXA1-203ENST00000553751 DNAH6Q9C0G6 4158 aa14.39□□□□□ -0.11
FOXA1-203ENST00000553751 GOLT1AQ6ZVE7 132 aa14.38□□□□□ -0.11
FOXA1-203ENST00000553751 LINC00612Q8N6U2 182 aa14.38□□□□□ -0.11
FOXA1-203ENST00000553751 C11orf72Q8NBR9 251 aa14.38□□□□□ -0.11
FOXA1-203ENST00000553751 ARPC5LQ9BPX5 153 aa14.38□□□□□ -0.11
FOXA1-203ENST00000553751 TMEM167BQ9NRX6 74 aa14.38□□□□□ -0.11
FOXA1-203ENST00000553751 LENEPQ9Y5L5 61 aa14.38□□□□□ -0.11
FOXA1-203ENST00000553751 CTXND1A0A1B0GTU2 59 aa14.37□□□□□ -0.11
FOXA1-203ENST00000553751 SNURFLB1AK76 121 aa14.37□□□□□ -0.11
FOXA1-203ENST00000553751 ANXA2RQ3ZCQ2 193 aa14.37□□□□□ -0.11
FOXA1-203ENST00000553751 AKR1C8PQ5T2L2 129 aa14.37□□□□□ -0.11
FOXA1-203ENST00000553751 TMEM88Q6PEY1 159 aa14.37□□□□□ -0.11
FOXA1-203ENST00000553751 EIF4E3Q8N5X7 224 aaKnown RBP14.37□□□□□ -0.11
FOXA1-203ENST00000553751 ZNF680Q8NEM1 530 aa14.37□□□□□ -0.11
FOXA1-203ENST00000553751 CBY3A6NI87 242 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms