RNA–Protein interactions for RNA: ENST00000553719.5

PSEN1-208, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-208ENST00000553719 MEF2BQ02080 365 aaPredicted RBP13.21□□□□□ -0.29
PSEN1-208ENST00000553719 HAGHQ16775 308 aa13.21□□□□□ -0.29
PSEN1-208ENST00000553719 CLLU1Q5K131 121 aa13.21□□□□□ -0.29
PSEN1-208ENST00000553719 MORN3Q6PF18 240 aaPredicted RBP13.21□□□□□ -0.29
PSEN1-208ENST00000553719 CYB561D1Q8N8Q1 229 aa13.21□□□□□ -0.29
PSEN1-208ENST00000553719 OR4B1Q8NGF8 309 aa13.21□□□□□ -0.29
PSEN1-208ENST00000553719 HIST1H2BAQ96A08 127 aa13.21□□□□□ -0.29
PSEN1-208ENST00000553719 IGKV3-20P01619 116 aa13.2□□□□□ -0.3
PSEN1-208ENST00000553719 TAGLN2P37802 199 aaKnown RBP13.2□□□□□ -0.3
PSEN1-208ENST00000553719 DEFB121Q5J5C9 76 aa13.2□□□□□ -0.3
PSEN1-208ENST00000553719 TMEM75Q8N9X5 138 aa13.2□□□□□ -0.3
PSEN1-208ENST00000553719 C2CD4CQ8TF44 421 aa13.2□□□□□ -0.3
PSEN1-208ENST00000553719 C11orf52Q96A22 123 aa13.2□□□□□ -0.3
PSEN1-208ENST00000553719 LINC00477Q96M19 166 aa13.2□□□□□ -0.3
PSEN1-208ENST00000553719 FAM210AQ96ND0 272 aa13.2□□□□□ -0.3
PSEN1-208ENST00000553719 SLC35B3Q9H1N7 401 aa13.2□□□□□ -0.3
PSEN1-208ENST00000553719 VAX2Q9UIW0 290 aa13.2□□□□□ -0.3
PSEN1-208ENST00000553719 RPH3ALQ9UNE2 315 aa13.2□□□□□ -0.3
PSEN1-208ENST00000553719 TRAV8-1A0A0A6YYK1 113 aa13.19□□□□□ -0.3
PSEN1-208ENST00000553719 APOC4P55056 127 aa13.19□□□□□ -0.3
PSEN1-208ENST00000553719 ZNF506Q5JVG8 444 aa13.19□□□□□ -0.3
PSEN1-208ENST00000553719 RARRES2Q99969 163 aa13.19□□□□□ -0.3
PSEN1-208ENST00000553719 CSTL1Q9H114 145 aa13.19□□□□□ -0.3
PSEN1-208ENST00000553719 ZNF492Q9P255 531 aa13.19□□□□□ -0.3
PSEN1-208ENST00000553719 KLF12Q9Y4X4 402 aa13.19□□□□□ -0.3
PSEN1-208ENST00000553719 NBEAL2Q6ZNJ1 2754 aa13.18□□□□□ -0.3
PSEN1-208ENST00000553719 TRBV7-9A0A0J9YWB2 115 aa13.18□□□□□ -0.3
PSEN1-208ENST00000553719 SCO2A0A1W2PP80 73 aa13.18□□□□□ -0.3
PSEN1-208ENST00000553719 RBFOX3A6NFN3 312 aa13.18□□□□□ -0.3
PSEN1-208ENST00000553719 CRXO43186 299 aaPredicted RBP13.18□□□□□ -0.3
PSEN1-208ENST00000553719 CRISP2P16562 243 aa13.18□□□□□ -0.3
PSEN1-208ENST00000553719 ZNF138P52744 262 aa13.18□□□□□ -0.3
PSEN1-208ENST00000553719 RAB14P61106 215 aa13.18□□□□□ -0.3
PSEN1-208ENST00000553719 TMEM78Q5T7P6 136 aa13.18□□□□□ -0.3
PSEN1-208ENST00000553719 CSNK1G2-AS1Q8NCQ2 148 aa13.18□□□□□ -0.3
PSEN1-208ENST00000553719 Q8TAT8 98 aa13.18□□□□□ -0.3
PSEN1-208ENST00000553719 NDUFS6O75380 124 aaKnown RBP13.17□□□□□ -0.3
PSEN1-208ENST00000553719 SBSPONQ8IVN8 264 aa13.17□□□□□ -0.3
PSEN1-208ENST00000553719 TVP23CQ96ET8 276 aa13.17□□□□□ -0.3
PSEN1-208ENST00000553719 LINC00479Q96M42 142 aa13.17□□□□□ -0.3
PSEN1-208ENST00000553719 B9D2Q9BPU9 175 aa13.17□□□□□ -0.3
PSEN1-208ENST00000553719 LENEPQ9Y5L5 61 aa13.17□□□□□ -0.3
PSEN1-208ENST00000553719 TRBV6-1A0A0K0K1D8 114 aa13.16□□□□□ -0.3
PSEN1-208ENST00000553719 FBLL1A6NHQ2 334 aaKnown RBP13.16□□□□□ -0.3
PSEN1-208ENST00000553719 KLLNB2CW77 178 aa13.16□□□□□ -0.3
PSEN1-208ENST00000553719 M0R2Z0 102 aa13.16□□□□□ -0.3
PSEN1-208ENST00000553719 UBE2CO00762 179 aa13.16□□□□□ -0.3
PSEN1-208ENST00000553719 PDE6DO43924 150 aa13.16□□□□□ -0.3
PSEN1-208ENST00000553719 CA1P00915 261 aaPredicted RBP13.16□□□□□ -0.3
PSEN1-208ENST00000553719 NUTF2P61970 127 aaKnown RBP13.16□□□□□ -0.3
PSEN1-208ENST00000553719 SPINK13Q1W4C9 94 aa13.16□□□□□ -0.3
PSEN1-208ENST00000553719 TOR2AQ5JU69 321 aa13.16□□□□□ -0.3
PSEN1-208ENST00000553719 ZFAND2AQ8N6M9 145 aa13.16□□□□□ -0.3
PSEN1-208ENST00000553719 TENM3Q9P273 2699 aa13.16□□□□□ -0.3
PSEN1-208ENST00000553719 COL7A1Q02388 2944 aa13.16□□□□□ -0.3
PSEN1-208ENST00000553719 F6UZH7 168 aa13.15□□□□□ -0.3
PSEN1-208ENST00000553719 K7EQM0 130 aa13.15□□□□□ -0.3
PSEN1-208ENST00000553719 CDKN1BP46527 198 aa13.15□□□□□ -0.3
PSEN1-208ENST00000553719 FXYD7P58549 80 aa13.15□□□□□ -0.3
PSEN1-208ENST00000553719 FLI1Q01543 452 aaPredicted RBP13.15□□□□□ -0.3
PSEN1-208ENST00000553719 KIR3DS1Q14943 382 aa13.15□□□□□ -0.3
PSEN1-208ENST00000553719 Q6ZWC4 215 aa13.15□□□□□ -0.3
PSEN1-208ENST00000553719 Q86TA4 180 aa13.15□□□□□ -0.3
PSEN1-208ENST00000553719 SGK494Q96LW2 274 aa13.15□□□□□ -0.3
PSEN1-208ENST00000553719 ASCL2Q99929 193 aa13.15□□□□□ -0.3
PSEN1-208ENST00000553719 TM2D3Q9BRN9 247 aa13.15□□□□□ -0.3
PSEN1-208ENST00000553719 PSG8Q9UQ74 426 aa13.15□□□□□ -0.3
PSEN1-208ENST00000553719 TRAV34A0A0B4J273 112 aa13.14□□□□□ -0.31
PSEN1-208ENST00000553719 AMBPP02760 352 aa13.14□□□□□ -0.31
PSEN1-208ENST00000553719 LEPP41159 167 aa13.14□□□□□ -0.31
PSEN1-208ENST00000553719 TMEM183BQ1AE95 376 aa13.14□□□□□ -0.31
PSEN1-208ENST00000553719 PRR9Q5T870 116 aa13.14□□□□□ -0.31
PSEN1-208ENST00000553719 FMC1Q96HJ9 113 aa13.14□□□□□ -0.31
PSEN1-208ENST00000553719 XCL2Q9UBD3 114 aa13.14□□□□□ -0.31
PSEN1-208ENST00000553719 TMEM250H0YL14 139 aa13.13□□□□□ -0.31
PSEN1-208ENST00000553719 RBMY1A1P0DJD3 496 aaKnown RBP13.13□□□□□ -0.31
PSEN1-208ENST00000553719 RBMY1CP0DJD4 496 aa13.13□□□□□ -0.31
PSEN1-208ENST00000553719 AKR1C3P42330 323 aa13.13□□□□□ -0.31
PSEN1-208ENST00000553719 RBMY1FQ15415 496 aaKnown RBP13.13□□□□□ -0.31
PSEN1-208ENST00000553719 GFI1BQ5VTD9 330 aa13.13□□□□□ -0.31
PSEN1-208ENST00000553719 IGF2BP2-AS1Q96M15 143 aa13.13□□□□□ -0.31
PSEN1-208ENST00000553719 DERL1Q9BUN8 251 aa13.13□□□□□ -0.31
PSEN1-208ENST00000553719 C1QTNF4Q9BXJ3 329 aa13.13□□□□□ -0.31
PSEN1-208ENST00000553719 TRAV12-2A0A075B6T6 113 aa13.12□□□□□ -0.31
PSEN1-208ENST00000553719 LTAP01374 205 aa13.12□□□□□ -0.31
PSEN1-208ENST00000553719 TSPOP30536 169 aa13.12□□□□□ -0.31
PSEN1-208ENST00000553719 SRSF3P84103 164 aaKnown RBP13.12□□□□□ -0.31
PSEN1-208ENST00000553719 DEFB135Q30KP9 77 aa13.12□□□□□ -0.31
PSEN1-208ENST00000553719 COX8CQ7Z4L0 72 aa13.12□□□□□ -0.31
PSEN1-208ENST00000553719 RNF183Q96D59 192 aa13.12□□□□□ -0.31
PSEN1-208ENST00000553719 EIF5A2Q9GZV4 153 aaKnown RBP13.12□□□□□ -0.31
PSEN1-208ENST00000553719 S100A9P06702 114 aaKnown RBP13.11□□□□□ -0.31
PSEN1-208ENST00000553719 RPL35P42766 123 aaKnown RBP13.11□□□□□ -0.31
PSEN1-208ENST00000553719 ZNF705AQ6ZN79 300 aaPredicted RBP13.11□□□□□ -0.31
PSEN1-208ENST00000553719 PRNTQ86SH4 94 aa13.11□□□□□ -0.31
PSEN1-208ENST00000553719 C1orf158Q8N1D5 194 aa13.11□□□□□ -0.31
PSEN1-208ENST00000553719 MED9Q9NWA0 146 aa13.11□□□□□ -0.31
PSEN1-208ENST00000553719 TP53TG1Q9Y2A0 90 aa13.11□□□□□ -0.31
PSEN1-208ENST00000553719 C9JQL5 133 aa13.1□□□□□ -0.31
PSEN1-208ENST00000553719 INSP01308 110 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms