RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 BOD1L1Q8NFC6 3051 aa1.3□□□□□ -2.2
VRK1-202ENST00000553683 ATRQ13535 2644 aa1.3□□□□□ -2.2
VRK1-202ENST00000553683 DUOX2Q9NRD8 1548 aa1.3□□□□□ -2.2
VRK1-202ENST00000553683 NF1P21359 2839 aa1.3□□□□□ -2.2
VRK1-202ENST00000553683 UGGT1Q9NYU2 1555 aa1.3□□□□□ -2.2
VRK1-202ENST00000553683 RGPD3A6NKT7 1758 aaPredicted RBP1.29□□□□□ -2.2
VRK1-202ENST00000553683 RGPD4Q7Z3J3 1758 aa1.29□□□□□ -2.2
VRK1-202ENST00000553683 JMJD1CQ15652 2540 aa1.29□□□□□ -2.2
VRK1-202ENST00000553683 STAB1Q9NY15 2570 aa1.29□□□□□ -2.2
VRK1-202ENST00000553683 DMDP11532 3685 aa1.29□□□□□ -2.2
VRK1-202ENST00000553683 TRBV20-1A0A075B6N2 111 aa1.29□□□□□ -2.2
VRK1-202ENST00000553683 TRAV12-2A0A075B6T6 113 aa1.29□□□□□ -2.2
VRK1-202ENST00000553683 TRAV27A0A087WT01 109 aa1.29□□□□□ -2.2
VRK1-202ENST00000553683 A0A087WWC5 75 aa1.29□□□□□ -2.2
VRK1-202ENST00000553683 A0A0J9YW62 118 aa1.29□□□□□ -2.2
VRK1-202ENST00000553683 F8W1H4 67 aa1.29□□□□□ -2.2
VRK1-202ENST00000553683 TMEM250H0YL14 139 aa1.29□□□□□ -2.2
VRK1-202ENST00000553683 H3BP45 60 aa1.29□□□□□ -2.2
VRK1-202ENST00000553683 H3BRM9 83 aa1.29□□□□□ -2.2
VRK1-202ENST00000553683 J3QRE1 110 aa1.29□□□□□ -2.2
VRK1-202ENST00000553683 M0R378 163 aa1.29□□□□□ -2.2
VRK1-202ENST00000553683 PIRO00625 290 aa1.29□□□□□ -2.2
VRK1-202ENST00000553683 UQCRQO14949 82 aa1.29□□□□□ -2.2
VRK1-202ENST00000553683 GSTZ1O43708 216 aaPredicted RBP1.29□□□□□ -2.2
VRK1-202ENST00000553683 LYZL6O75951 148 aa1.29□□□□□ -2.2
VRK1-202ENST00000553683 NDUFB6O95139 128 aa1.29□□□□□ -2.2
VRK1-202ENST00000553683 APOMO95445 188 aa1.29□□□□□ -2.2
VRK1-202ENST00000553683 FSTL3O95633 263 aa1.29□□□□□ -2.2
VRK1-202ENST00000553683 SLC25A5P05141 298 aaKnown RBP1.29□□□□□ -2.2
VRK1-202ENST00000553683 PPIBP23284 216 aaKnown RBP1.29□□□□□ -2.2
VRK1-202ENST00000553683 NFYAP23511 347 aaPredicted RBP1.29□□□□□ -2.2
VRK1-202ENST00000553683 HLA-DMBP28068 263 aa1.29□□□□□ -2.2
VRK1-202ENST00000553683 SRP14P37108 136 aaKnown RBP1.29□□□□□ -2.2
VRK1-202ENST00000553683 CA7P43166 264 aa1.29□□□□□ -2.2
VRK1-202ENST00000553683 HINT1P49773 126 aaPredicted RBP1.29□□□□□ -2.2
VRK1-202ENST00000553683 NDUFA8P51970 172 aa1.29□□□□□ -2.2
VRK1-202ENST00000553683 TMEM258P61165 79 aa1.29□□□□□ -2.2
VRK1-202ENST00000553683 VMA21Q3ZAQ7 101 aa1.29□□□□□ -2.2
VRK1-202ENST00000553683 BVES-AS1Q5T3Y7 98 aa1.29□□□□□ -2.2
VRK1-202ENST00000553683 TMEM236Q5W0B7 351 aa1.29□□□□□ -2.2
VRK1-202ENST00000553683 C22orf39Q6P5X5 142 aa1.29□□□□□ -2.2
VRK1-202ENST00000553683 CLEC19AQ6UXS0 136 aa1.29□□□□□ -2.2
VRK1-202ENST00000553683 AAED1Q7RTV5 226 aa1.29□□□□□ -2.2
VRK1-202ENST00000553683 ATP5L2Q7Z4Y8 100 aa1.29□□□□□ -2.2
VRK1-202ENST00000553683 FAM19A3Q7Z5A8 133 aa1.29□□□□□ -2.2
VRK1-202ENST00000553683 TRAPPC6BQ86SZ2 158 aa1.29□□□□□ -2.2
VRK1-202ENST00000553683 MSRB3Q8IXL7 192 aa1.29□□□□□ -2.2
VRK1-202ENST00000553683 C1orf174Q8IYL3 243 aa1.29□□□□□ -2.2
VRK1-202ENST00000553683 Q8N2B8 174 aa1.29□□□□□ -2.2
VRK1-202ENST00000553683 C10orf111Q8N326 155 aa1.29□□□□□ -2.2
VRK1-202ENST00000553683 SLC22A24Q8N4F4 322 aa1.29□□□□□ -2.2
VRK1-202ENST00000553683 RPP25LQ8N5L8 163 aaKnown RBP1.29□□□□□ -2.2
VRK1-202ENST00000553683 TMEM75Q8N9X5 138 aa1.29□□□□□ -2.2
VRK1-202ENST00000553683 ZFP62Q8NB50 900 aaPredicted RBP1.29□□□□□ -2.2
VRK1-202ENST00000553683 OR5D16Q8NGK9 328 aa1.29□□□□□ -2.2
VRK1-202ENST00000553683 OR10AC1Q8NH08 325 aa1.29□□□□□ -2.2
VRK1-202ENST00000553683 ATP6V0E2Q8NHE4 81 aa1.29□□□□□ -2.2
VRK1-202ENST00000553683 SGMS2Q8NHU3 365 aa1.29□□□□□ -2.2
VRK1-202ENST00000553683 DCANP1Q8TF63 244 aa1.29□□□□□ -2.2
VRK1-202ENST00000553683 C2orf15Q8WU43 125 aaKnown RBP1.29□□□□□ -2.2
VRK1-202ENST00000553683 POP5Q969H6 163 aaKnown RBP1.29□□□□□ -2.2
VRK1-202ENST00000553683 FXYD5Q96DB9 178 aa1.29□□□□□ -2.2
VRK1-202ENST00000553683 AP1S3Q96PC3 154 aa1.29□□□□□ -2.2
VRK1-202ENST00000553683 METTL26Q96S19 204 aa1.29□□□□□ -2.2
VRK1-202ENST00000553683 PEBP4Q96S96 227 aa1.29□□□□□ -2.2
VRK1-202ENST00000553683 AMELYQ99218 206 aa1.29□□□□□ -2.2
VRK1-202ENST00000553683 C20orf78Q9BR46 151 aa1.29□□□□□ -2.2
VRK1-202ENST00000553683 MRPL20Q9BYC9 149 aaKnown RBP1.29□□□□□ -2.2
VRK1-202ENST00000553683 TMEM106BQ9NUM4 274 aa1.29□□□□□ -2.2
VRK1-202ENST00000553683 PCTPQ9UKL6 214 aa1.29□□□□□ -2.2
VRK1-202ENST00000553683 HES2Q9Y543 173 aa1.29□□□□□ -2.2
VRK1-202ENST00000553683 CHCHD2Q9Y6H1 151 aaPredicted RBP1.29□□□□□ -2.2
VRK1-202ENST00000553683 PLIN4Q96Q06 1357 aa1.29□□□□□ -2.2
VRK1-202ENST00000553683 NCOA2Q15596 1464 aa1.29□□□□□ -2.2
VRK1-202ENST00000553683 CCDC168Q8NDH2 2452 aa1.29□□□□□ -2.2
VRK1-202ENST00000553683 COL6A5A8TX70 2615 aa1.29□□□□□ -2.2
VRK1-202ENST00000553683 IGSF10Q6WRI0 2623 aa1.29□□□□□ -2.2
VRK1-202ENST00000553683 CEP295Q9C0D2 2601 aa1.29□□□□□ -2.2
VRK1-202ENST00000553683 MAST1Q9Y2H9 1570 aa1.29□□□□□ -2.2
VRK1-202ENST00000553683 ABCA5Q8WWZ7 1642 aa1.29□□□□□ -2.2
VRK1-202ENST00000553683 RBBP6Q7Z6E9 1792 aaKnown RBP1.29□□□□□ -2.2
VRK1-202ENST00000553683 DICER1Q9UPY3 1922 aaKnown RBP1.28□□□□□ -2.2
VRK1-202ENST00000553683 KIAA0100Q14667 2235 aaKnown RBP1.28□□□□□ -2.2
VRK1-202ENST00000553683 TLN1Q9Y490 2541 aaKnown RBP1.28□□□□□ -2.2
VRK1-202ENST00000553683 CELSR1Q9NYQ6 3014 aa1.28□□□□□ -2.2
VRK1-202ENST00000553683 SMIM26A0A096LP01 95 aa1.28□□□□□ -2.2
VRK1-202ENST00000553683 IGHV1-58A0A0C4DH39 117 aa1.28□□□□□ -2.2
VRK1-202ENST00000553683 A0A0D9SEW6 157 aa1.28□□□□□ -2.2
VRK1-202ENST00000553683 C3orf85A0A1B0GTC6 90 aa1.28□□□□□ -2.2
VRK1-202ENST00000553683 PGPA6NDG6 321 aa1.28□□□□□ -2.2
VRK1-202ENST00000553683 TLCD2A6NGC4 264 aa1.28□□□□□ -2.2
VRK1-202ENST00000553683 A8MUN3 132 aa1.28□□□□□ -2.2
VRK1-202ENST00000553683 NDUFC2-KCTD14E9PQ53 114 aa1.28□□□□□ -2.2
VRK1-202ENST00000553683 NDUFS5O43920 106 aa1.28□□□□□ -2.2
VRK1-202ENST00000553683 PROSCO94903 275 aa1.28□□□□□ -2.2
VRK1-202ENST00000553683 CYB5AP00167 134 aa1.28□□□□□ -2.2
VRK1-202ENST00000553683 PTHP01270 115 aa1.28□□□□□ -2.2
VRK1-202ENST00000553683 TRGC2P03986 189 aa1.28□□□□□ -2.2
VRK1-202ENST00000553683 PYYP10082 97 aa1.28□□□□□ -2.2
VRK1-202ENST00000553683 SLC25A4P12235 298 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms