RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 C5orf17Q8NAS9 161 aa3.79□□□□□ -1.8
VTI1B-202ENST00000553619 GLMPQ8WWB7 406 aa3.79□□□□□ -1.8
VTI1B-202ENST00000553619 FXYD5Q96DB9 178 aa3.79□□□□□ -1.8
VTI1B-202ENST00000553619 MRPL53Q96EL3 112 aaKnown RBP3.79□□□□□ -1.8
VTI1B-202ENST00000553619 RARRES2Q99969 163 aa3.79□□□□□ -1.8
VTI1B-202ENST00000553619 SEC11CQ9BY50 192 aa3.79□□□□□ -1.8
VTI1B-202ENST00000553619 Q9H3A6 140 aa3.79□□□□□ -1.8
VTI1B-202ENST00000553619 NRN1Q9NPD7 142 aa3.79□□□□□ -1.8
VTI1B-202ENST00000553619 ZNF586Q9NXT0 402 aa3.79□□□□□ -1.8
VTI1B-202ENST00000553619 EPDR1Q9UM22 224 aa3.79□□□□□ -1.8
VTI1B-202ENST00000553619 TACC2O95359 2948 aa3.79□□□□□ -1.8
VTI1B-202ENST00000553619 IGHV3OR16-13A0A075B7E8 117 aa3.78□□□□□ -1.8
VTI1B-202ENST00000553619 IGHV3-49A0A0A0MS15 119 aa3.78□□□□□ -1.8
VTI1B-202ENST00000553619 IGHV3-74A0A0B4J1X5 117 aa3.78□□□□□ -1.8
VTI1B-202ENST00000553619 IGHV3-66A0A0C4DH42 116 aa3.78□□□□□ -1.8
VTI1B-202ENST00000553619 TMEM213A2RRL7 107 aa3.78□□□□□ -1.8
VTI1B-202ENST00000553619 RBAKDNA6NC62 111 aa3.78□□□□□ -1.8
VTI1B-202ENST00000553619 OR4C46A6NHA9 309 aa3.78□□□□□ -1.8
VTI1B-202ENST00000553619 ZNF727A8MUV8 499 aa3.78□□□□□ -1.8
VTI1B-202ENST00000553619 H3BQ15 152 aa3.78□□□□□ -1.8
VTI1B-202ENST00000553619 ISLRO14498 428 aa3.78□□□□□ -1.8
VTI1B-202ENST00000553619 EIF3GO75821 320 aaKnown RBP eCLIP3.78□□□□□ -1.8
VTI1B-202ENST00000553619 APOHP02749 345 aaPredicted RBP3.78□□□□□ -1.8
VTI1B-202ENST00000553619 CSN3P07498 182 aa3.78□□□□□ -1.8
VTI1B-202ENST00000553619 AKR1C3P42330 323 aa3.78□□□□□ -1.8
VTI1B-202ENST00000553619 AKR1D1P51857 326 aa3.78□□□□□ -1.8
VTI1B-202ENST00000553619 CEBPGP53567 150 aa3.78□□□□□ -1.8
VTI1B-202ENST00000553619 UBE2G1P62253 170 aa3.78□□□□□ -1.8
VTI1B-202ENST00000553619 PSG3Q16557 428 aa3.78□□□□□ -1.8
VTI1B-202ENST00000553619 TMEM241Q24JQ0 296 aa3.78□□□□□ -1.8
VTI1B-202ENST00000553619 DEFB114Q30KQ6 69 aa3.78□□□□□ -1.8
VTI1B-202ENST00000553619 KRTAP24-1Q3LI83 254 aa3.78□□□□□ -1.8
VTI1B-202ENST00000553619 C9orf66Q5T8R8 295 aa3.78□□□□□ -1.8
VTI1B-202ENST00000553619 FAM90A2PQ658T7 463 aa3.78□□□□□ -1.8
VTI1B-202ENST00000553619 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.78□□□□□ -1.8
VTI1B-202ENST00000553619 LINC00477Q96M19 166 aa3.78□□□□□ -1.8
VTI1B-202ENST00000553619 NIPSNAP3BQ9BS92 247 aa3.78□□□□□ -1.8
VTI1B-202ENST00000553619 SAV1Q9H4B6 383 aaPredicted RBP3.78□□□□□ -1.8
VTI1B-202ENST00000553619 ZNF331Q9NQX6 463 aaPredicted RBP3.78□□□□□ -1.8
VTI1B-202ENST00000553619 NAT8Q9UHE5 227 aa3.78□□□□□ -1.8
VTI1B-202ENST00000553619 YTHDF2Q9Y5A9 579 aaKnown RBP3.78□□□□□ -1.8
VTI1B-202ENST00000553619 SMAD5-AS1Q9Y6J3 95 aa3.78□□□□□ -1.8
VTI1B-202ENST00000553619 B4DEV8 164 aa3.77□□□□□ -1.81
VTI1B-202ENST00000553619 PEX7O00628 323 aa3.77□□□□□ -1.81
VTI1B-202ENST00000553619 SAP30O75446 220 aa3.77□□□□□ -1.81
VTI1B-202ENST00000553619 NDUFB4O95168 129 aa3.77□□□□□ -1.81
VTI1B-202ENST00000553619 TCRAP04437 139 aa3.77□□□□□ -1.81
VTI1B-202ENST00000553619 SFTA3P0C7M3 94 aa3.77□□□□□ -1.81
VTI1B-202ENST00000553619 ATP5G3P48201 142 aa3.77□□□□□ -1.81
VTI1B-202ENST00000553619 KRTAP10-3P60369 221 aa3.77□□□□□ -1.81
VTI1B-202ENST00000553619 PNRC1Q12796 327 aaPredicted RBP3.77□□□□□ -1.81
VTI1B-202ENST00000553619 MAJINQ3KP22 176 aa3.77□□□□□ -1.81
VTI1B-202ENST00000553619 DNLZQ5SXM8 178 aa3.77□□□□□ -1.81
VTI1B-202ENST00000553619 LCN12Q6JVE5 192 aa3.77□□□□□ -1.81
VTI1B-202ENST00000553619 EBLN2Q6P2I7 272 aa3.77□□□□□ -1.81
VTI1B-202ENST00000553619 SVBPQ8N300 66 aa3.77□□□□□ -1.81
VTI1B-202ENST00000553619 CYB561D1Q8N8Q1 229 aa3.77□□□□□ -1.81
VTI1B-202ENST00000553619 OR10J6PQ8NGY7 276 aa3.77□□□□□ -1.81
VTI1B-202ENST00000553619 C11orf52Q96A22 123 aa3.77□□□□□ -1.81
VTI1B-202ENST00000553619 TVP23CQ96ET8 276 aa3.77□□□□□ -1.81
VTI1B-202ENST00000553619 SMIM12Q96EX1 92 aa3.77□□□□□ -1.81
VTI1B-202ENST00000553619 FMC1Q96HJ9 113 aa3.77□□□□□ -1.81
VTI1B-202ENST00000553619 C17orf77Q96MU5 243 aa3.77□□□□□ -1.81
VTI1B-202ENST00000553619 DUX3Q96PT4 197 aa3.77□□□□□ -1.81
VTI1B-202ENST00000553619 SPAG8Q99932 426 aaPredicted RBP3.77□□□□□ -1.81
VTI1B-202ENST00000553619 SMIM7Q9BQ49 75 aa3.77□□□□□ -1.81
VTI1B-202ENST00000553619 ATG101Q9BSB4 218 aa3.77□□□□□ -1.81
VTI1B-202ENST00000553619 NDFIP1Q9BT67 221 aa3.77□□□□□ -1.81
VTI1B-202ENST00000553619 MS4A6AQ9H2W1 248 aa3.77□□□□□ -1.81
VTI1B-202ENST00000553619 GSN-AS1Q9NRJ2 163 aa3.77□□□□□ -1.81
VTI1B-202ENST00000553619 ZFP30Q9Y2G7 519 aa3.77□□□□□ -1.81
VTI1B-202ENST00000553619 LY96Q9Y6Y9 160 aa3.77□□□□□ -1.81
VTI1B-202ENST00000553619 ZNF469Q96JG9 3925 aaPredicted RBP3.77□□□□□ -1.81
VTI1B-202ENST00000553619 MTORP42345 2549 aa3.77□□□□□ -1.81
VTI1B-202ENST00000553619 VPS13CQ709C8 3753 aa3.77□□□□□ -1.81
VTI1B-202ENST00000553619 IGKV3-7A0A075B6H7 116 aa3.76□□□□□ -1.81
VTI1B-202ENST00000553619 TRBV6-1A0A0K0K1D8 114 aa3.76□□□□□ -1.81
VTI1B-202ENST00000553619 LINC00587B1AMM8 73 aa3.76□□□□□ -1.81
VTI1B-202ENST00000553619 C9JCJ5 164 aa3.76□□□□□ -1.81
VTI1B-202ENST00000553619 H3BTX0 84 aa3.76□□□□□ -1.81
VTI1B-202ENST00000553619 J3KRW8 73 aa3.76□□□□□ -1.81
VTI1B-202ENST00000553619 K7EQG2 157 aa3.76□□□□□ -1.81
VTI1B-202ENST00000553619 DUSP14O95147 198 aaKnown RBP3.76□□□□□ -1.81
VTI1B-202ENST00000553619 APOC3P02656 99 aa3.76□□□□□ -1.81
VTI1B-202ENST00000553619 SNRPCP09234 159 aaKnown RBP3.76□□□□□ -1.81
VTI1B-202ENST00000553619 TMEM183BQ1AE95 376 aa3.76□□□□□ -1.81
VTI1B-202ENST00000553619 ZNF674Q2M3X9 581 aa3.76□□□□□ -1.81
VTI1B-202ENST00000553619 C10orf91Q5T1B1 145 aa3.76□□□□□ -1.81
VTI1B-202ENST00000553619 TMEM78Q5T7P6 136 aa3.76□□□□□ -1.81
VTI1B-202ENST00000553619 BAGE2Q86Y30 109 aa3.76□□□□□ -1.81
VTI1B-202ENST00000553619 EXOC3-AS1Q8N2X6 119 aa3.76□□□□□ -1.81
VTI1B-202ENST00000553619 GBGT1Q8N5D6 347 aa3.76□□□□□ -1.81
VTI1B-202ENST00000553619 TMEM75Q8N9X5 138 aa3.76□□□□□ -1.81
VTI1B-202ENST00000553619 ZNF738Q8NE65 137 aa3.76□□□□□ -1.81
VTI1B-202ENST00000553619 WFDC9Q8NEX5 89 aa3.76□□□□□ -1.81
VTI1B-202ENST00000553619 DAZAP1Q96EP5 407 aaKnown RBP3.76□□□□□ -1.81
VTI1B-202ENST00000553619 LINC00052Q96N35 136 aa3.76□□□□□ -1.81
VTI1B-202ENST00000553619 PARLQ9H300 379 aa3.76□□□□□ -1.81
VTI1B-202ENST00000553619 SDF2L1Q9HCN8 221 aa3.76□□□□□ -1.81
VTI1B-202ENST00000553619 RPH3ALQ9UNE2 315 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms