RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 LINC00305Q7Z4B0 112 aa8.99□□□□□ -0.97
PRPF39-204ENST00000553605 Q8N976 141 aa8.99□□□□□ -0.97
PRPF39-204ENST00000553605 OR51S1Q8NGJ8 323 aa8.99□□□□□ -0.97
PRPF39-204ENST00000553605 FAM19A4Q96LR4 140 aa8.99□□□□□ -0.97
PRPF39-204ENST00000553605 TRAV8-3A0A0A6YYJ7 113 aa8.98□□□□□ -0.97
PRPF39-204ENST00000553605 KRTAP9-6A0A140TA67 174 aa8.98□□□□□ -0.97
PRPF39-204ENST00000553605 FAM25AB3EWG3 89 aa8.98□□□□□ -0.97
PRPF39-204ENST00000553605 FAM25CB3EWG5 89 aa8.98□□□□□ -0.97
PRPF39-204ENST00000553605 FAM25GB3EWG6 89 aa8.98□□□□□ -0.97
PRPF39-204ENST00000553605 DISC1C4P0D8 188 aa8.98□□□□□ -0.97
PRPF39-204ENST00000553605 H3BQ15 152 aa8.98□□□□□ -0.97
PRPF39-204ENST00000553605 OR4E1P0C645 316 aa8.98□□□□□ -0.97
PRPF39-204ENST00000553605 IGLC2P0DOY2 106 aa8.98□□□□□ -0.97
PRPF39-204ENST00000553605 OPCMLQ14982 345 aa8.98□□□□□ -0.97
PRPF39-204ENST00000553605 Q6ZQT7 251 aa8.98□□□□□ -0.97
PRPF39-204ENST00000553605 LINC00477Q96M19 166 aa8.98□□□□□ -0.97
PRPF39-204ENST00000553605 PAXXQ9BUH6 204 aa8.98□□□□□ -0.97
PRPF39-204ENST00000553605 VCX3BQ9H321 246 aa8.98□□□□□ -0.97
PRPF39-204ENST00000553605 RAB26Q9ULW5 256 aa8.98□□□□□ -0.97
PRPF39-204ENST00000553605 RNF222A6NCQ9 220 aa8.97□□□□□ -0.97
PRPF39-204ENST00000553605 H3BP45 60 aa8.97□□□□□ -0.97
PRPF39-204ENST00000553605 SYNGR2O43760 224 aa8.97□□□□□ -0.97
PRPF39-204ENST00000553605 SRPXP78539 464 aa8.97□□□□□ -0.97
PRPF39-204ENST00000553605 RASL10AQ92737 203 aa8.97□□□□□ -0.97
PRPF39-204ENST00000553605 STRAPQ9Y3F4 350 aaKnown RBP8.97□□□□□ -0.97
PRPF39-204ENST00000553605 PFN1P07737 140 aaKnown RBP8.96□□□□□ -0.98
PRPF39-204ENST00000553605 ANXA3P12429 323 aa8.96□□□□□ -0.98
PRPF39-204ENST00000553605 CRISP2P16562 243 aa8.96□□□□□ -0.98
PRPF39-204ENST00000553605 PXDC1Q5TGL8 231 aa8.96□□□□□ -0.98
PRPF39-204ENST00000553605 AGPAT4-IT1Q9H0P7 198 aa8.96□□□□□ -0.98
PRPF39-204ENST00000553605 COX11Q9Y6N1 276 aa8.96□□□□□ -0.98
PRPF39-204ENST00000553605 TRAV4A0A0B4J268 109 aa8.95□□□□□ -0.98
PRPF39-204ENST00000553605 NMBP08949 121 aa8.95□□□□□ -0.98
PRPF39-204ENST00000553605 GUK1Q16774 197 aa8.95□□□□□ -0.98
PRPF39-204ENST00000553605 LELP1Q5T871 98 aa8.95□□□□□ -0.98
PRPF39-204ENST00000553605 ATP6V0E2Q8NHE4 81 aa8.95□□□□□ -0.98
PRPF39-204ENST00000553605 PIGBOS1A0A0B4J2F0 54 aa8.94□□□□□ -0.98
PRPF39-204ENST00000553605 DUXBA0A1W2PPF3 345 aa8.94□□□□□ -0.98
PRPF39-204ENST00000553605 K7EPK0 472 aa8.94□□□□□ -0.98
PRPF39-204ENST00000553605 M0R3E3 92 aa8.94□□□□□ -0.98
PRPF39-204ENST00000553605 SLC25A6P12236 298 aa8.94□□□□□ -0.98
PRPF39-204ENST00000553605 PRR9Q5T870 116 aa8.94□□□□□ -0.98
PRPF39-204ENST00000553605 Q8N3U1 123 aa8.94□□□□□ -0.98
PRPF39-204ENST00000553605 ZFAND2AQ8N6M9 145 aa8.94□□□□□ -0.98
PRPF39-204ENST00000553605 OR4C5Q8NGB2 326 aa8.94□□□□□ -0.98
PRPF39-204ENST00000553605 C15orf40Q8WUR7 153 aa8.94□□□□□ -0.98
PRPF39-204ENST00000553605 MRPL53Q96EL3 112 aaKnown RBP8.94□□□□□ -0.98
PRPF39-204ENST00000553605 PRRT1Q99946 306 aa8.94□□□□□ -0.98
PRPF39-204ENST00000553605 NPVFQ9HCQ7 196 aa8.94□□□□□ -0.98
PRPF39-204ENST00000553605 EXTL2Q9UBQ6 330 aa8.94□□□□□ -0.98
PRPF39-204ENST00000553605 GOSR2O14653 212 aa8.93□□□□□ -0.98
PRPF39-204ENST00000553605 COX7A2P2O60397 106 aa8.93□□□□□ -0.98
PRPF39-204ENST00000553605 SSBP1Q04837 148 aaKnown RBP8.93□□□□□ -0.98
PRPF39-204ENST00000553605 SLC38A11Q08AI6 406 aa8.93□□□□□ -0.98
PRPF39-204ENST00000553605 TOR2AQ5JU69 321 aa8.93□□□□□ -0.98
PRPF39-204ENST00000553605 SCGB3A2Q96PL1 93 aa8.93□□□□□ -0.98
PRPF39-204ENST00000553605 SPXQ9BT56 116 aa8.93□□□□□ -0.98
PRPF39-204ENST00000553605 SRRQ9GZT4 340 aa8.93□□□□□ -0.98
PRPF39-204ENST00000553605 DPH3P1Q9H4G8 78 aa8.93□□□□□ -0.98
PRPF39-204ENST00000553605 RPH3ALQ9UNE2 315 aa8.93□□□□□ -0.98
PRPF39-204ENST00000553605 IGHV3-16A0A0C4DH30 117 aa8.92□□□□□ -0.98
PRPF39-204ENST00000553605 FABP12A6NFH5 140 aa8.92□□□□□ -0.98
PRPF39-204ENST00000553605 AKAIN1P0CW23 69 aa8.92□□□□□ -0.98
PRPF39-204ENST00000553605 RRAS2P62070 204 aaPredicted RBP8.92□□□□□ -0.98
PRPF39-204ENST00000553605 ODF1Q14990 250 aa8.92□□□□□ -0.98
PRPF39-204ENST00000553605 MZT2AQ6P582 158 aa8.92□□□□□ -0.98
PRPF39-204ENST00000553605 GGTLC3B5MD39 225 aa8.91□□□□□ -0.98
PRPF39-204ENST00000553605 ZNF253O75346 499 aa8.91□□□□□ -0.98
PRPF39-204ENST00000553605 GATA1P15976 413 aaPredicted RBP8.91□□□□□ -0.98
PRPF39-204ENST00000553605 MUC21Q5SSG8 566 aa8.91□□□□□ -0.98
PRPF39-204ENST00000553605 C10orf113Q5VZT2 155 aa8.91□□□□□ -0.98
PRPF39-204ENST00000553605 DAZ4Q86SG3 579 aaKnown RBP8.91□□□□□ -0.98
PRPF39-204ENST00000553605 ZNF546Q86UE3 836 aa8.91□□□□□ -0.98
PRPF39-204ENST00000553605 CLVS1Q8IUQ0 354 aaPredicted RBP8.91□□□□□ -0.98
PRPF39-204ENST00000553605 YIPF6Q96EC8 236 aa8.91□□□□□ -0.98
PRPF39-204ENST00000553605 DAZ3Q9NR90 486 aaKnown RBP8.91□□□□□ -0.98
PRPF39-204ENST00000553605 TRAV8-1A0A0A6YYK1 113 aa8.9□□□□□ -0.98
PRPF39-204ENST00000553605 ANKRD65E5RJM6 399 aa8.9□□□□□ -0.98
PRPF39-204ENST00000553605 POLR2GP62487 172 aaKnown RBP eCLIP8.9□□□□□ -0.98
PRPF39-204ENST00000553605 TMEM78Q5T7P6 136 aa8.9□□□□□ -0.98
PRPF39-204ENST00000553605 FAM122CQ6P4D5 195 aa8.9□□□□□ -0.98
PRPF39-204ENST00000553605 RMI2Q96E14 147 aa8.9□□□□□ -0.98
PRPF39-204ENST00000553605 GTSF1LQ9H1H1 148 aa8.9□□□□□ -0.98
PRPF39-204ENST00000553605 PSENENQ9NZ42 101 aa8.9□□□□□ -0.98
PRPF39-204ENST00000553605 PRELID1Q9Y255 219 aa8.9□□□□□ -0.98
PRPF39-204ENST00000553605 A0A0D9SG52 128 aa8.89□□□□□ -0.99
PRPF39-204ENST00000553605 FNDC10F2Z333 226 aa8.89□□□□□ -0.99
PRPF39-204ENST00000553605 AGPAT2O15120 278 aa8.89□□□□□ -0.99
PRPF39-204ENST00000553605 NCS1P62166 190 aa8.89□□□□□ -0.99
PRPF39-204ENST00000553605 SLC25A29Q8N8R3 303 aa8.89□□□□□ -0.99
PRPF39-204ENST00000553605 HSD17B11Q8NBQ5 300 aa8.89□□□□□ -0.99
PRPF39-204ENST00000553605 RAB2BQ8WUD1 216 aa8.89□□□□□ -0.99
PRPF39-204ENST00000553605 CCDC59Q9P031 241 aaKnown RBP8.89□□□□□ -0.99
PRPF39-204ENST00000553605 ZNF492Q9P255 531 aa8.89□□□□□ -0.99
PRPF39-204ENST00000553605 SCP2D1Q9UJQ7 156 aa8.89□□□□□ -0.99
PRPF39-204ENST00000553605 RABL2BQ9UNT1 228 aa8.89□□□□□ -0.99
PRPF39-204ENST00000553605 TRBV19A0A075B6N1 114 aa8.88□□□□□ -0.99
PRPF39-204ENST00000553605 IGKV2D-24A0A075B6R9 120 aa8.88□□□□□ -0.99
PRPF39-204ENST00000553605 HIST1H1EP10412 219 aaKnown RBP8.88□□□□□ -0.99
PRPF39-204ENST00000553605 MRPS10P82664 201 aaKnown RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms