RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 ZNF586Q9NXT0 402 aa8.32□□□□□ -1.08
SRP54-203ENST00000553544 FUT9Q9Y231 359 aa8.32□□□□□ -1.08
SRP54-203ENST00000553544 PRELID1Q9Y255 219 aa8.32□□□□□ -1.08
SRP54-203ENST00000553544 NBDYA0A0U1RRE5 68 aa8.31□□□□□ -1.08
SRP54-203ENST00000553544 A0A1W2PPV4 95 aa8.31□□□□□ -1.08
SRP54-203ENST00000553544 PLAC8L1A1L4L8 177 aa8.31□□□□□ -1.08
SRP54-203ENST00000553544 ZNF705GA8MUZ8 300 aaPredicted RBP8.31□□□□□ -1.08
SRP54-203ENST00000553544 AZU1P20160 251 aa8.31□□□□□ -1.08
SRP54-203ENST00000553544 M6PRP20645 277 aa8.31□□□□□ -1.08
SRP54-203ENST00000553544 CDKN1BP46527 198 aa8.31□□□□□ -1.08
SRP54-203ENST00000553544 SERF2P84101 59 aa8.31□□□□□ -1.08
SRP54-203ENST00000553544 ZNF345Q14585 488 aa8.31□□□□□ -1.08
SRP54-203ENST00000553544 TMEM256Q8N2U0 113 aa8.31□□□□□ -1.08
SRP54-203ENST00000553544 C15orf53Q8NAA6 179 aa8.31□□□□□ -1.08
SRP54-203ENST00000553544 OR2G3Q8NGZ4 309 aa8.31□□□□□ -1.08
SRP54-203ENST00000553544 MRPL53Q96EL3 112 aaKnown RBP8.31□□□□□ -1.08
SRP54-203ENST00000553544 PPP1R14DQ9NXH3 145 aa8.31□□□□□ -1.08
SRP54-203ENST00000553544 TNFSF18Q9UNG2 199 aa8.31□□□□□ -1.08
SRP54-203ENST00000553544 DMBT1Q9UGM3 2413 aaPredicted RBP8.3□□□□□ -1.08
SRP54-203ENST00000553544 NACAE9PAV3 2078 aa8.3□□□□□ -1.08
SRP54-203ENST00000553544 TRBV19A0A075B6N1 114 aa8.3□□□□□ -1.08
SRP54-203ENST00000553544 OR7C2O60412 319 aa8.3□□□□□ -1.08
SRP54-203ENST00000553544 NDUFB4O95168 129 aa8.3□□□□□ -1.08
SRP54-203ENST00000553544 GCSAMLQ5JQS6 135 aa8.3□□□□□ -1.08
SRP54-203ENST00000553544 PQLC2Q6ZP29 291 aa8.3□□□□□ -1.08
SRP54-203ENST00000553544 PAXXQ9BUH6 204 aa8.3□□□□□ -1.08
SRP54-203ENST00000553544 LRP1BQ9NZR2 4599 aa8.3□□□□□ -1.08
SRP54-203ENST00000553544 LYRM9A8MSI8 78 aa8.29□□□□□ -1.08
SRP54-203ENST00000553544 HMSDA8MTL9 139 aa8.29□□□□□ -1.08
SRP54-203ENST00000553544 ARPC5O15511 151 aa8.29□□□□□ -1.08
SRP54-203ENST00000553544 TAS2R60P59551 318 aa8.29□□□□□ -1.08
SRP54-203ENST00000553544 DAD1P61803 113 aa8.29□□□□□ -1.08
SRP54-203ENST00000553544 EIF5AP63241 154 aaKnown RBP8.29□□□□□ -1.08
SRP54-203ENST00000553544 KIR3DS1Q14943 382 aa8.29□□□□□ -1.08
SRP54-203ENST00000553544 FAM74A1Q5RGS3 127 aa8.29□□□□□ -1.08
SRP54-203ENST00000553544 SPATA12Q7Z6I5 190 aa8.29□□□□□ -1.08
SRP54-203ENST00000553544 OR10J6PQ8NGY7 276 aa8.29□□□□□ -1.08
SRP54-203ENST00000553544 FAM167A-AS1Q96KT0 104 aa8.29□□□□□ -1.08
SRP54-203ENST00000553544 ODF3Q96PU9 254 aa8.29□□□□□ -1.08
SRP54-203ENST00000553544 LINC01587Q99440 93 aa8.29□□□□□ -1.08
SRP54-203ENST00000553544 C20orf144Q9BQM9 153 aa8.29□□□□□ -1.08
SRP54-203ENST00000553544 OR51M1Q9H341 326 aa8.29□□□□□ -1.08
SRP54-203ENST00000553544 A0A0D9SG52 128 aa8.28□□□□□ -1.08
SRP54-203ENST00000553544 KANTRA0A1W2PQU2 76 aa8.28□□□□□ -1.08
SRP54-203ENST00000553544 RNF222A6NCQ9 220 aa8.28□□□□□ -1.08
SRP54-203ENST00000553544 NPIPB6E9PJ23 425 aa8.28□□□□□ -1.08
SRP54-203ENST00000553544 CT45A10P0DMU9 189 aa8.28□□□□□ -1.08
SRP54-203ENST00000553544 PYYP10082 97 aa8.28□□□□□ -1.08
SRP54-203ENST00000553544 UBE2L3P68036 154 aaKnown RBP8.28□□□□□ -1.08
SRP54-203ENST00000553544 LYPD1Q8N2G4 141 aa8.28□□□□□ -1.08
SRP54-203ENST00000553544 HSD17B11Q8NBQ5 300 aa8.28□□□□□ -1.08
SRP54-203ENST00000553544 SLC25A2Q9BXI2 301 aa8.28□□□□□ -1.08
SRP54-203ENST00000553544 H7BYZ3 331 aa8.27□□□□□ -1.09
SRP54-203ENST00000553544 M0R3E3 92 aa8.27□□□□□ -1.09
SRP54-203ENST00000553544 NBEAP1P0C6P0 100 aa8.27□□□□□ -1.09
SRP54-203ENST00000553544 ATP6V0CP27449 155 aa8.27□□□□□ -1.09
SRP54-203ENST00000553544 CSN1S1P47710 185 aa8.27□□□□□ -1.09
SRP54-203ENST00000553544 CDC34P49427 236 aaPredicted RBP8.27□□□□□ -1.09
SRP54-203ENST00000553544 CCL18P55774 89 aa8.27□□□□□ -1.09
SRP54-203ENST00000553544 GFI1BQ5VTD9 330 aa8.27□□□□□ -1.09
SRP54-203ENST00000553544 ZNF493Q6ZR52 646 aa8.27□□□□□ -1.09
SRP54-203ENST00000553544 MIR17HGQ75NE6 70 aa8.27□□□□□ -1.09
SRP54-203ENST00000553544 OR10G4Q8NGN3 311 aa8.27□□□□□ -1.09
SRP54-203ENST00000553544 OR10G9Q8NGN4 311 aa8.27□□□□□ -1.09
SRP54-203ENST00000553544 OR10G7Q8NGN6 311 aa8.27□□□□□ -1.09
SRP54-203ENST00000553544 ZNRF2Q8NHG8 242 aa8.27□□□□□ -1.09
SRP54-203ENST00000553544 RNASE8Q8TDE3 154 aaKnown RBP8.27□□□□□ -1.09
SRP54-203ENST00000553544 C16orf74Q96GX8 76 aa8.27□□□□□ -1.09
SRP54-203ENST00000553544 ARPC5LQ9BPX5 153 aa8.27□□□□□ -1.09
SRP54-203ENST00000553544 WFDC1Q9HC57 220 aa8.27□□□□□ -1.09
SRP54-203ENST00000553544 APOBP04114 4563 aaKnown RBP8.27□□□□□ -1.09
SRP54-203ENST00000553544 EPM2AB3EWF7 344 aa8.26□□□□□ -1.09
SRP54-203ENST00000553544 Q5BKY6 102 aa8.26□□□□□ -1.09
SRP54-203ENST00000553544 TMEM263Q8WUH6 116 aaKnown RBP8.26□□□□□ -1.09
SRP54-203ENST00000553544 BLNKQ8WV28 456 aa8.26□□□□□ -1.09
SRP54-203ENST00000553544 RNF141Q8WVD5 230 aa8.26□□□□□ -1.09
SRP54-203ENST00000553544 FAM19A4Q96LR4 140 aa8.26□□□□□ -1.09
SRP54-203ENST00000553544 ACTR3CQ9C0K3 210 aaPredicted RBP8.26□□□□□ -1.09
SRP54-203ENST00000553544 SRRM2Q9UQ35 2752 aaKnown RBP8.25□□□□□ -1.09
SRP54-203ENST00000553544 PFDN1O60925 122 aa8.25□□□□□ -1.09
SRP54-203ENST00000553544 INAFM2P0DMQ5 153 aa8.25□□□□□ -1.09
SRP54-203ENST00000553544 AKR1C8PQ5T2L2 129 aa8.25□□□□□ -1.09
SRP54-203ENST00000553544 FAM122CQ6P4D5 195 aa8.25□□□□□ -1.09
SRP54-203ENST00000553544 EXOC3-AS1Q8N2X6 119 aa8.25□□□□□ -1.09
SRP54-203ENST00000553544 KCNRGQ8N5I3 272 aa8.25□□□□□ -1.09
SRP54-203ENST00000553544 RXFP4Q8TDU9 374 aa8.25□□□□□ -1.09
SRP54-203ENST00000553544 FXYD5Q96DB9 178 aa8.25□□□□□ -1.09
SRP54-203ENST00000553544 AGPAT4-IT1Q9H0P7 198 aa8.25□□□□□ -1.09
SRP54-203ENST00000553544 TMEM167BQ9NRX6 74 aa8.25□□□□□ -1.09
SRP54-203ENST00000553544 TIMM8BQ9Y5J9 83 aaPredicted RBP8.25□□□□□ -1.09
SRP54-203ENST00000553544 DNAH5Q8TE73 4624 aa8.24□□□□□ -1.09
SRP54-203ENST00000553544 CBY3A6NI87 242 aa8.24□□□□□ -1.09
SRP54-203ENST00000553544 KLLNB2CW77 178 aa8.24□□□□□ -1.09
SRP54-203ENST00000553544 NUDT3O95989 172 aa8.24□□□□□ -1.09
SRP54-203ENST00000553544 OR10J4P0C629 311 aa8.24□□□□□ -1.09
SRP54-203ENST00000553544 DEFB130BP0DP73 79 aa8.24□□□□□ -1.09
SRP54-203ENST00000553544 DEFB130AP0DP74 79 aa8.24□□□□□ -1.09
SRP54-203ENST00000553544 HTN1P15515 57 aa8.24□□□□□ -1.09
SRP54-203ENST00000553544 LEPP41159 167 aa8.24□□□□□ -1.09
SRP54-203ENST00000553544 RAB2AP61019 212 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 297.3 ms