RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 C11orf94C9JXX5 98 aa13.23□□□□□ -0.29
CPSF2-202ENST00000553427 EIF3GO75821 320 aaKnown RBP eCLIP13.23□□□□□ -0.29
CPSF2-202ENST00000553427 NMBP08949 121 aa13.23□□□□□ -0.29
CPSF2-202ENST00000553427 CRISP2P16562 243 aa13.23□□□□□ -0.29
CPSF2-202ENST00000553427 TAS2R60P59551 318 aa13.23□□□□□ -0.29
CPSF2-202ENST00000553427 TCTE3Q8IZS6 198 aa13.23□□□□□ -0.29
CPSF2-202ENST00000553427 RXFP4Q8TDU9 374 aa13.23□□□□□ -0.29
CPSF2-202ENST00000553427 ST6GAL2Q96JF0 529 aa13.23□□□□□ -0.29
CPSF2-202ENST00000553427 IGKV2-40A0A087WW87 121 aaPredicted RBP13.22□□□□□ -0.29
CPSF2-202ENST00000553427 LCE6AA0A183 80 aa13.22□□□□□ -0.29
CPSF2-202ENST00000553427 KLLNB2CW77 178 aa13.22□□□□□ -0.29
CPSF2-202ENST00000553427 H7BYZ3 331 aa13.22□□□□□ -0.29
CPSF2-202ENST00000553427 IGKV2D-40P01614 121 aaPredicted RBP13.22□□□□□ -0.29
CPSF2-202ENST00000553427 SPART-AS1P0CW21 52 aa13.22□□□□□ -0.29
CPSF2-202ENST00000553427 ERCC8Q13216 396 aa13.22□□□□□ -0.29
CPSF2-202ENST00000553427 TMEM78Q5T7P6 136 aa13.22□□□□□ -0.29
CPSF2-202ENST00000553427 DKK2Q9UBU2 259 aa13.22□□□□□ -0.29
CPSF2-202ENST00000553427 HMGB3O15347 200 aaKnown RBP13.21□□□□□ -0.29
CPSF2-202ENST00000553427 BCL2L11O43521 198 aa13.21□□□□□ -0.29
CPSF2-202ENST00000553427 CXorf1O96002 111 aa13.21□□□□□ -0.29
CPSF2-202ENST00000553427 GCHFRP30047 84 aa13.21□□□□□ -0.29
CPSF2-202ENST00000553427 KIR3DS1Q14943 382 aa13.21□□□□□ -0.29
CPSF2-202ENST00000553427 C12orf74Q32Q52 190 aa13.21□□□□□ -0.29
CPSF2-202ENST00000553427 FAM74A1Q5RGS3 127 aa13.21□□□□□ -0.29
CPSF2-202ENST00000553427 LINC01587Q99440 93 aa13.21□□□□□ -0.29
CPSF2-202ENST00000553427 VGLL1Q99990 258 aa13.21□□□□□ -0.29
CPSF2-202ENST00000553427 TMEM167BQ9NRX6 74 aa13.21□□□□□ -0.29
CPSF2-202ENST00000553427 CTXND1A0A1B0GTU2 59 aa13.2□□□□□ -0.3
CPSF2-202ENST00000553427 ZNF705GA8MUZ8 300 aaPredicted RBP13.2□□□□□ -0.3
CPSF2-202ENST00000553427 DIRC3C9JPN6 131 aa13.2□□□□□ -0.3
CPSF2-202ENST00000553427 AKR1C8PQ5T2L2 129 aa13.2□□□□□ -0.3
CPSF2-202ENST00000553427 Q6ZTC4 211 aa13.2□□□□□ -0.3
CPSF2-202ENST00000553427 ZNF492Q9P255 531 aa13.2□□□□□ -0.3
CPSF2-202ENST00000553427 YTHDF2Q9Y5A9 579 aaKnown RBP13.2□□□□□ -0.3
CPSF2-202ENST00000553427 TRAV10A0A0B4J240 114 aa13.19□□□□□ -0.3
CPSF2-202ENST00000553427 KANTRA0A1W2PQU2 76 aa13.19□□□□□ -0.3
CPSF2-202ENST00000553427 ZNF138P52744 262 aa13.19□□□□□ -0.3
CPSF2-202ENST00000553427 EMP1P54849 157 aa13.19□□□□□ -0.3
CPSF2-202ENST00000553427 ZNF726P1Q15940 193 aa13.19□□□□□ -0.3
CPSF2-202ENST00000553427 FAM222AQ5U5X8 452 aa13.19□□□□□ -0.3
CPSF2-202ENST00000553427 ZNF493Q6ZR52 646 aa13.19□□□□□ -0.3
CPSF2-202ENST00000553427 SSX7Q7RTT5 188 aa13.19□□□□□ -0.3
CPSF2-202ENST00000553427 CMTM2Q8TAZ6 248 aa13.19□□□□□ -0.3
CPSF2-202ENST00000553427 TMED6Q8WW62 240 aa13.19□□□□□ -0.3
CPSF2-202ENST00000553427 LENEPQ9Y5L5 61 aa13.19□□□□□ -0.3
CPSF2-202ENST00000553427 PLAC8L1A1L4L8 177 aa13.18□□□□□ -0.3
CPSF2-202ENST00000553427 C7orf71A4D174 169 aa13.18□□□□□ -0.3
CPSF2-202ENST00000553427 PGPA6NDG6 321 aa13.18□□□□□ -0.3
CPSF2-202ENST00000553427 TCTAP57738 103 aa13.18□□□□□ -0.3
CPSF2-202ENST00000553427 ZFAND2AQ8N6M9 145 aa13.18□□□□□ -0.3
CPSF2-202ENST00000553427 TMEM263Q8WUH6 116 aaKnown RBP13.18□□□□□ -0.3
CPSF2-202ENST00000553427 C16orf74Q96GX8 76 aa13.18□□□□□ -0.3
CPSF2-202ENST00000553427 PYGO2Q9BRQ0 406 aa13.18□□□□□ -0.3
CPSF2-202ENST00000553427 NIPSNAP3BQ9BS92 247 aa13.18□□□□□ -0.3
CPSF2-202ENST00000553427 LYRM9A8MSI8 78 aa13.17□□□□□ -0.3
CPSF2-202ENST00000553427 SEC11BP0C7V7 166 aa13.17□□□□□ -0.3
CPSF2-202ENST00000553427 AZU1P20160 251 aa13.17□□□□□ -0.3
CPSF2-202ENST00000553427 EIF5AP63241 154 aaKnown RBP13.17□□□□□ -0.3
CPSF2-202ENST00000553427 RNASE8Q8TDE3 154 aaKnown RBP13.17□□□□□ -0.3
CPSF2-202ENST00000553427 C2CD4CQ8TF44 421 aa13.17□□□□□ -0.3
CPSF2-202ENST00000553427 LINC00467Q9BRT7 94 aa13.17□□□□□ -0.3
CPSF2-202ENST00000553427 TRAV12-3A0A0B4J271 114 aa13.16□□□□□ -0.3
CPSF2-202ENST00000553427 SERTM2A0A1B0GWG4 89 aa13.16□□□□□ -0.3
CPSF2-202ENST00000553427 TMUB2Q71RG4 321 aa13.16□□□□□ -0.3
CPSF2-202ENST00000553427 C5orf17Q8NAS9 161 aa13.16□□□□□ -0.3
CPSF2-202ENST00000553427 HYLS1Q96M11 299 aa13.16□□□□□ -0.3
CPSF2-202ENST00000553427 ZNF471Q9BX82 626 aaPredicted RBP13.16□□□□□ -0.3
CPSF2-202ENST00000553427 UMAD1C9J7I0 102 aa13.15□□□□□ -0.3
CPSF2-202ENST00000553427 J3KRW8 73 aa13.15□□□□□ -0.3
CPSF2-202ENST00000553427 ZNF324O75467 553 aaPredicted RBP13.15□□□□□ -0.3
CPSF2-202ENST00000553427 C1QBP02746 253 aa13.15□□□□□ -0.3
CPSF2-202ENST00000553427 PRM2P04554 102 aa13.15□□□□□ -0.3
CPSF2-202ENST00000553427 Q8TAT8 98 aa13.15□□□□□ -0.3
CPSF2-202ENST00000553427 STOML3Q8TAV4 291 aa13.15□□□□□ -0.3
CPSF2-202ENST00000553427 A0A1W2PRE2 83 aa13.14□□□□□ -0.31
CPSF2-202ENST00000553427 GGTLC3B5MD39 225 aa13.14□□□□□ -0.31
CPSF2-202ENST00000553427 PFDN1O60925 122 aa13.14□□□□□ -0.31
CPSF2-202ENST00000553427 GPX1P07203 203 aa13.14□□□□□ -0.31
CPSF2-202ENST00000553427 CD300CQ08708 224 aa13.14□□□□□ -0.31
CPSF2-202ENST00000553427 BTN1A1Q13410 526 aa13.14□□□□□ -0.31
CPSF2-202ENST00000553427 GOLT1AQ6ZVE7 132 aa13.14□□□□□ -0.31
CPSF2-202ENST00000553427 ZNF767PQ75MW2 155 aa13.14□□□□□ -0.31
CPSF2-202ENST00000553427 CCDC28AQ8IWP9 274 aa13.14□□□□□ -0.31
CPSF2-202ENST00000553427 DEFB131BA0A096LNP1 70 aa13.13□□□□□ -0.31
CPSF2-202ENST00000553427 MAP1LC3B2A6NCE7 125 aa13.13□□□□□ -0.31
CPSF2-202ENST00000553427 TPT1P13693 172 aaKnown RBP13.13□□□□□ -0.31
CPSF2-202ENST00000553427 RNASE4P34096 147 aaKnown RBP13.13□□□□□ -0.31
CPSF2-202ENST00000553427 PRR9Q5T870 116 aa13.13□□□□□ -0.31
CPSF2-202ENST00000553427 AKAP14Q86UN6 197 aa13.13□□□□□ -0.31
CPSF2-202ENST00000553427 LINC00476Q8WZB0 136 aa13.13□□□□□ -0.31
CPSF2-202ENST00000553427 MAP1LC3BQ9GZQ8 125 aa13.13□□□□□ -0.31
CPSF2-202ENST00000553427 TIMM8BQ9Y5J9 83 aaPredicted RBP13.13□□□□□ -0.31
CPSF2-202ENST00000553427 VPS13DQ5THJ4 4388 aa13.13□□□□□ -0.31
CPSF2-202ENST00000553427 TCRAP04437 139 aa13.12□□□□□ -0.31
CPSF2-202ENST00000553427 HTN1P15515 57 aa13.12□□□□□ -0.31
CPSF2-202ENST00000553427 DAD1P61803 113 aa13.12□□□□□ -0.31
CPSF2-202ENST00000553427 ANXA2RQ3ZCQ2 193 aa13.12□□□□□ -0.31
CPSF2-202ENST00000553427 DPPA3Q6W0C5 159 aa13.12□□□□□ -0.31
CPSF2-202ENST00000553427 ZNF680Q8NEM1 530 aa13.12□□□□□ -0.31
CPSF2-202ENST00000553427 HYDINQ4G0P3 5121 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms