RNA–Protein interactions for RNA: ENST00000553289.5

SYNE2-208, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,261 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-208ENST00000553289 PYGO2Q9BRQ0 406 aa9.2□□□□□ -0.94
SYNE2-208ENST00000553289 TICRRQ7Z2Z1 1910 aa9.2□□□□□ -0.94
SYNE2-208ENST00000553289 TRBV25-1A0A075B6N4 114 aa9.2□□□□□ -0.94
SYNE2-208ENST00000553289 CDKN1BP46527 198 aa9.2□□□□□ -0.94
SYNE2-208ENST00000553289 IGHV2-5P01817 119 aa9.2□□□□□ -0.94
SYNE2-208ENST00000553289 PRR30Q53SZ7 412 aaPredicted RBP9.2□□□□□ -0.94
SYNE2-208ENST00000553289 HAPLN4Q86UW8 402 aa9.2□□□□□ -0.94
SYNE2-208ENST00000553289 FXYD5Q96DB9 178 aa9.2□□□□□ -0.94
SYNE2-208ENST00000553289 SP5Q6BEB4 398 aaPredicted RBP9.19□□□□□ -0.94
SYNE2-208ENST00000553289 MYLKQ15746 1914 aa9.19□□□□□ -0.94
SYNE2-208ENST00000553289 G3V318 75 aa9.19□□□□□ -0.94
SYNE2-208ENST00000553289 LURAP1LQ8IV03 231 aa9.19□□□□□ -0.94
SYNE2-208ENST00000553289 TRAV8-3A0A0A6YYJ7 113 aa9.19□□□□□ -0.94
SYNE2-208ENST00000553289 IGLC2P0DOY2 106 aa9.19□□□□□ -0.94
SYNE2-208ENST00000553289 IGLC3P0DOY3 106 aa9.19□□□□□ -0.94
SYNE2-208ENST00000553289 ZNF134P52741 427 aa9.19□□□□□ -0.94
SYNE2-208ENST00000553289 FAM215AQ9Y5M1 114 aa9.19□□□□□ -0.94
SYNE2-208ENST00000553289 ACACAQ13085 2346 aa9.19□□□□□ -0.94
SYNE2-208ENST00000553289 SDHAF1A6NFY7 115 aa9.19□□□□□ -0.94
SYNE2-208ENST00000553289 RNF223E7ERA6 249 aa9.19□□□□□ -0.94
SYNE2-208ENST00000553289 SLAQ13239 276 aa9.19□□□□□ -0.94
SYNE2-208ENST00000553289 SPINK13Q1W4C9 94 aa9.19□□□□□ -0.94
SYNE2-208ENST00000553289 VWC2Q2TAL6 325 aa9.19□□□□□ -0.94
SYNE2-208ENST00000553289 C20orf78Q9BR46 151 aa9.19□□□□□ -0.94
SYNE2-208ENST00000553289 SPTBN1Q01082 2364 aaKnown RBP9.19□□□□□ -0.94
SYNE2-208ENST00000553289 IGHV1-24A0A0C4DH33 117 aa9.18□□□□□ -0.94
SYNE2-208ENST00000553289 INAFM2P0DMQ5 153 aa9.18□□□□□ -0.94
SYNE2-208ENST00000553289 TAL2Q16559 108 aa9.18□□□□□ -0.94
SYNE2-208ENST00000553289 DUX4L9Q6RFH8 374 aaPredicted RBP9.18□□□□□ -0.94
SYNE2-208ENST00000553289 LYPD6BQ8NI32 183 aa9.18□□□□□ -0.94
SYNE2-208ENST00000553289 MRPL53Q96EL3 112 aaKnown RBP9.18□□□□□ -0.94
SYNE2-208ENST00000553289 EREGO14944 169 aa9.18□□□□□ -0.94
SYNE2-208ENST00000553289 COX8AP10176 69 aa9.18□□□□□ -0.94
SYNE2-208ENST00000553289 Q5PR19 223 aa9.18□□□□□ -0.94
SYNE2-208ENST00000553289 ADAMTSL5Q6ZMM2 481 aa9.18□□□□□ -0.94
SYNE2-208ENST00000553289 MCRIP2Q9BUT9 160 aaKnown RBP9.18□□□□□ -0.94
SYNE2-208ENST00000553289 VWC2LB2RUY7 222 aa9.18□□□□□ -0.94
SYNE2-208ENST00000553289 C9JAW5 83 aa9.18□□□□□ -0.94
SYNE2-208ENST00000553289 ELANEP08246 267 aa9.18□□□□□ -0.94
SYNE2-208ENST00000553289 OCIAD2Q56VL3 154 aa9.18□□□□□ -0.94
SYNE2-208ENST00000553289 BOD1L2Q8IYS8 172 aa9.18□□□□□ -0.94
SYNE2-208ENST00000553289 SPAG8Q99932 426 aaPredicted RBP9.18□□□□□ -0.94
SYNE2-208ENST00000553289 SPANXDQ9BXN6 97 aa9.18□□□□□ -0.94
SYNE2-208ENST00000553289 WDR81Q562E7 1941 aa9.18□□□□□ -0.94
SYNE2-208ENST00000553289 ANXA2RQ3ZCQ2 193 aa9.18□□□□□ -0.94
SYNE2-208ENST00000553289 DEFB130BP0DP73 79 aa9.18□□□□□ -0.94
SYNE2-208ENST00000553289 DEFB130AP0DP74 79 aa9.18□□□□□ -0.94
SYNE2-208ENST00000553289 HIST1H4AP62805 103 aaKnown RBP9.18□□□□□ -0.94
SYNE2-208ENST00000553289 DEFB104AQ8WTQ1 72 aa9.18□□□□□ -0.94
SYNE2-208ENST00000553289 RNF138Q8WVD3 245 aa9.18□□□□□ -0.94
SYNE2-208ENST00000553289 SMIM2Q9BVW6 85 aa9.18□□□□□ -0.94
SYNE2-208ENST00000553289 C9orf118A6NHY6 69 aa9.17□□□□□ -0.94
SYNE2-208ENST00000553289 K7EMI3 77 aa9.17□□□□□ -0.94
SYNE2-208ENST00000553289 LTAP01374 205 aa9.17□□□□□ -0.94
SYNE2-208ENST00000553289 HLA-DRB4P13762 266 aa9.17□□□□□ -0.94
SYNE2-208ENST00000553289 Q6ZWC4 215 aa9.17□□□□□ -0.94
SYNE2-208ENST00000553289 LENEPQ9Y5L5 61 aa9.17□□□□□ -0.94
SYNE2-208ENST00000553289 HLA-DRB4X5D2U9 266 aa9.17□□□□□ -0.94
SYNE2-208ENST00000553289 MYO7BQ6PIF6 2116 aa9.17□□□□□ -0.94
SYNE2-208ENST00000553289 PRSS57Q6UWY2 283 aa9.17□□□□□ -0.94
SYNE2-208ENST00000553289 ZNF114Q8NC26 417 aa9.17□□□□□ -0.94
SYNE2-208ENST00000553289 WIPF2Q8TF74 440 aaPredicted RBP9.17□□□□□ -0.94
SYNE2-208ENST00000553289 VOPP1Q96AW1 172 aa9.17□□□□□ -0.94
SYNE2-208ENST00000553289 XCL2Q9UBD3 114 aa9.17□□□□□ -0.94
SYNE2-208ENST00000553289 IGHV7-4-1A0A0J9YVY3 117 aa9.17□□□□□ -0.94
SYNE2-208ENST00000553289 WIPF3A6NGB9 483 aa9.17□□□□□ -0.94
SYNE2-208ENST00000553289 Q6ZSR3 168 aa9.17□□□□□ -0.94
SYNE2-208ENST00000553289 TPSG1Q9NRR2 321 aa9.17□□□□□ -0.94
SYNE2-208ENST00000553289 SIGLEC8Q9NYZ4 499 aa9.17□□□□□ -0.94
SYNE2-208ENST00000553289 AZU1P20160 251 aa9.16□□□□□ -0.94
SYNE2-208ENST00000553289 FANCMQ8IYD8 2048 aa9.16□□□□□ -0.94
SYNE2-208ENST00000553289 ZC2HC1AQ96GY0 325 aa9.16□□□□□ -0.94
SYNE2-208ENST00000553289 FER1L5A0AVI2 2057 aa9.16□□□□□ -0.94
SYNE2-208ENST00000553289 RBAKDNA6NC62 111 aa9.16□□□□□ -0.94
SYNE2-208ENST00000553289 CDK2AP2O75956 126 aa9.16□□□□□ -0.94
SYNE2-208ENST00000553289 TCTEX1D4Q5JR98 221 aa9.16□□□□□ -0.94
SYNE2-208ENST00000553289 PIP4P1Q86T03 277 aa9.16□□□□□ -0.94
SYNE2-208ENST00000553289 TMEM243Q9BU79 118 aa9.16□□□□□ -0.94
SYNE2-208ENST00000553289 TANC1Q9C0D5 1861 aa9.16□□□□□ -0.94
SYNE2-208ENST00000553289 F8VRH5 84 aa9.16□□□□□ -0.94
SYNE2-208ENST00000553289 SIVA1O15304 175 aa9.16□□□□□ -0.94
SYNE2-208ENST00000553289 ZNF491Q8N8L2 437 aa9.16□□□□□ -0.94
SYNE2-208ENST00000553289 ATP6V0BQ99437 205 aa9.16□□□□□ -0.94
SYNE2-208ENST00000553289 A0A1B0GUS0 222 aa9.16□□□□□ -0.94
SYNE2-208ENST00000553289 GAGE12JA6NER3 117 aa9.16□□□□□ -0.94
SYNE2-208ENST00000553289 PSCAO43653 123 aa9.16□□□□□ -0.94
SYNE2-208ENST00000553289 GAGE1Q13065 139 aa9.16□□□□□ -0.94
SYNE2-208ENST00000553289 GAGE4Q13068 117 aa9.16□□□□□ -0.94
SYNE2-208ENST00000553289 GAGE5Q13069 117 aa9.16□□□□□ -0.94
SYNE2-208ENST00000553289 SNHG12Q9BXW3 62 aa9.15□□□□□ -0.94
SYNE2-208ENST00000553289 KLK9Q9UKQ9 250 aa9.15□□□□□ -0.94
SYNE2-208ENST00000553289 INS-IGF2F8WCM5 200 aa9.15□□□□□ -0.94
SYNE2-208ENST00000553289 DAD1P61803 113 aa9.15□□□□□ -0.94
SYNE2-208ENST00000553289 KNCNA6PVL3 124 aa9.15□□□□□ -0.95
SYNE2-208ENST00000553289 KRTAP27-1Q3LI81 207 aa9.15□□□□□ -0.95
SYNE2-208ENST00000553289 H3BMM0 161 aa9.14□□□□□ -0.95
SYNE2-208ENST00000553289 IGHV2-70P01814 119 aa9.14□□□□□ -0.95
SYNE2-208ENST00000553289 UBE2WQ96B02 151 aa9.14□□□□□ -0.95
SYNE2-208ENST00000553289 HEATR5AQ86XA9 2040 aa9.14□□□□□ -0.95
SYNE2-208ENST00000553289 F8W1H4 67 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms