RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 TMEM263Q8WUH6 116 aaKnown RBP11.18□□□□□ -0.62
CDK4-215ENST00000553237 RNF141Q8WVD5 230 aa11.18□□□□□ -0.62
CDK4-215ENST00000553237 TNFSF18Q9UNG2 199 aa11.18□□□□□ -0.62
CDK4-215ENST00000553237 G3V3Q6 166 aa11.17□□□□□ -0.62
CDK4-215ENST00000553237 OR7C2O60412 319 aa11.17□□□□□ -0.62
CDK4-215ENST00000553237 EIF3GO75821 320 aaKnown RBP eCLIP11.17□□□□□ -0.62
CDK4-215ENST00000553237 NUDT3O95989 172 aa11.17□□□□□ -0.62
CDK4-215ENST00000553237 ATP5G1P05496 136 aa11.17□□□□□ -0.62
CDK4-215ENST00000553237 M6PRP20645 277 aa11.17□□□□□ -0.62
CDK4-215ENST00000553237 ATP5G3P48201 142 aa11.17□□□□□ -0.62
CDK4-215ENST00000553237 LGALS9BQ3B8N2 356 aa11.17□□□□□ -0.62
CDK4-215ENST00000553237 ACOT6Q3I5F7 207 aaPredicted RBP11.17□□□□□ -0.62
CDK4-215ENST00000553237 RNF212Q495C1 297 aa11.17□□□□□ -0.62
CDK4-215ENST00000553237 C15orf53Q8NAA6 179 aa11.17□□□□□ -0.62
CDK4-215ENST00000553237 FXYD5Q96DB9 178 aa11.17□□□□□ -0.62
CDK4-215ENST00000553237 MRPL53Q96EL3 112 aaKnown RBP11.17□□□□□ -0.62
CDK4-215ENST00000553237 ZNF503Q96F45 646 aa11.17□□□□□ -0.62
CDK4-215ENST00000553237 SMLR1H3BR10 107 aa11.16□□□□□ -0.62
CDK4-215ENST00000553237 RTL8CO15255 209 aa11.16□□□□□ -0.62
CDK4-215ENST00000553237 TAS2R45P59539 299 aa11.16□□□□□ -0.62
CDK4-215ENST00000553237 RAB2AP61019 212 aa11.16□□□□□ -0.62
CDK4-215ENST00000553237 LINC00336Q6ZUF6 198 aa11.16□□□□□ -0.62
CDK4-215ENST00000553237 ODF3Q96PU9 254 aa11.16□□□□□ -0.62
CDK4-215ENST00000553237 ATG101Q9BSB4 218 aa11.16□□□□□ -0.62
CDK4-215ENST00000553237 AGPAT4-IT1Q9H0P7 198 aa11.16□□□□□ -0.62
CDK4-215ENST00000553237 AAMDCQ9H7C9 122 aa11.16□□□□□ -0.62
CDK4-215ENST00000553237 PRELID1Q9Y255 219 aa11.16□□□□□ -0.62
CDK4-215ENST00000553237 ATP6V0CP27449 155 aa11.15□□□□□ -0.62
CDK4-215ENST00000553237 ICAM4Q14773 271 aa11.15□□□□□ -0.62
CDK4-215ENST00000553237 KHDC3LQ587J8 217 aa11.15□□□□□ -0.62
CDK4-215ENST00000553237 RPL7L1Q6DKI1 246 aaKnown RBP11.15□□□□□ -0.62
CDK4-215ENST00000553237 FAM122CQ6P4D5 195 aa11.15□□□□□ -0.62
CDK4-215ENST00000553237 OR10G4Q8NGN3 311 aa11.15□□□□□ -0.62
CDK4-215ENST00000553237 OR10G9Q8NGN4 311 aa11.15□□□□□ -0.62
CDK4-215ENST00000553237 OR10G7Q8NGN6 311 aa11.15□□□□□ -0.62
CDK4-215ENST00000553237 PHYHIPLQ96FC7 376 aa11.15□□□□□ -0.62
CDK4-215ENST00000553237 HECTD4Q9Y4D8 3996 aa11.14□□□□□ -0.63
CDK4-215ENST00000553237 IGKV2-40A0A087WW87 121 aaPredicted RBP11.14□□□□□ -0.63
CDK4-215ENST00000553237 A0A1W2PPV4 95 aa11.14□□□□□ -0.63
CDK4-215ENST00000553237 GAGE12BA1L429 117 aa11.14□□□□□ -0.63
CDK4-215ENST00000553237 PRSS29PA6NIE9 313 aa11.14□□□□□ -0.63
CDK4-215ENST00000553237 GAGE7O76087 117 aa11.14□□□□□ -0.63
CDK4-215ENST00000553237 IGKV2D-40P01614 121 aaPredicted RBP11.14□□□□□ -0.63
CDK4-215ENST00000553237 GAGE12FP0CL80 117 aa11.14□□□□□ -0.63
CDK4-215ENST00000553237 GAGE12GP0CL81 117 aa11.14□□□□□ -0.63
CDK4-215ENST00000553237 GAGE12IP0CL82 117 aa11.14□□□□□ -0.63
CDK4-215ENST00000553237 UBE2L3P68036 154 aaKnown RBP11.14□□□□□ -0.63
CDK4-215ENST00000553237 Q6ZR54 194 aa11.14□□□□□ -0.63
CDK4-215ENST00000553237 OR2G3Q8NGZ4 309 aa11.14□□□□□ -0.63
CDK4-215ENST00000553237 LINC00477Q96M19 166 aa11.14□□□□□ -0.63
CDK4-215ENST00000553237 PSMG3Q9BT73 122 aaPredicted RBP11.14□□□□□ -0.63
CDK4-215ENST00000553237 BORCS7-ASMTA0A0B4J1R7 106 aa11.13□□□□□ -0.63
CDK4-215ENST00000553237 C7orf71A4D174 169 aa11.13□□□□□ -0.63
CDK4-215ENST00000553237 SNURFLB1AK76 121 aa11.13□□□□□ -0.63
CDK4-215ENST00000553237 ARPC5O15511 151 aa11.13□□□□□ -0.63
CDK4-215ENST00000553237 SLC25A5P05141 298 aaKnown RBP11.13□□□□□ -0.63
CDK4-215ENST00000553237 RNASE4P34096 147 aaKnown RBP11.13□□□□□ -0.63
CDK4-215ENST00000553237 RANP62826 216 aaKnown RBP11.13□□□□□ -0.63
CDK4-215ENST00000553237 CD300CQ08708 224 aa11.13□□□□□ -0.63
CDK4-215ENST00000553237 OR5I1Q13606 314 aa11.13□□□□□ -0.63
CDK4-215ENST00000553237 VGLL1Q99990 258 aa11.13□□□□□ -0.63
CDK4-215ENST00000553237 PYGO2Q9BRQ0 406 aa11.13□□□□□ -0.63
CDK4-215ENST00000553237 SH3BGRL3Q9H299 93 aa11.13□□□□□ -0.63
CDK4-215ENST00000553237 DNAH2Q9P225 4427 aa11.12□□□□□ -0.63
CDK4-215ENST00000553237 HMGB3O15347 200 aaKnown RBP11.12□□□□□ -0.63
CDK4-215ENST00000553237 SERF2P84101 59 aa11.12□□□□□ -0.63
CDK4-215ENST00000553237 BTN1A1Q13410 526 aa11.12□□□□□ -0.63
CDK4-215ENST00000553237 LINC00612Q8N6U2 182 aa11.12□□□□□ -0.63
CDK4-215ENST00000553237 FAM19A4Q96LR4 140 aa11.12□□□□□ -0.63
CDK4-215ENST00000553237 NACAE9PAV3 2078 aa11.12□□□□□ -0.63
CDK4-215ENST00000553237 A0A1B0GVY2 172 aa11.11□□□□□ -0.63
CDK4-215ENST00000553237 KLLNB2CW77 178 aa11.11□□□□□ -0.63
CDK4-215ENST00000553237 PQLC2Q6ZP29 291 aa11.11□□□□□ -0.63
CDK4-215ENST00000553237 C9orf47Q6ZRZ4 202 aa11.11□□□□□ -0.63
CDK4-215ENST00000553237 LYPD1Q8N2G4 141 aa11.11□□□□□ -0.63
CDK4-215ENST00000553237 GNPNAT1Q96EK6 184 aaPredicted RBP11.11□□□□□ -0.63
CDK4-215ENST00000553237 Q9H3A6 140 aa11.11□□□□□ -0.63
CDK4-215ENST00000553237 GSN-AS1Q9NRJ2 163 aa11.11□□□□□ -0.63
CDK4-215ENST00000553237 DNAH17Q9UFH2 4485 aa11.11□□□□□ -0.63
CDK4-215ENST00000553237 A0A0J9YY99 117 aa11.1□□□□□ -0.63
CDK4-215ENST00000553237 ZNF324O75467 553 aaPredicted RBP11.1□□□□□ -0.63
CDK4-215ENST00000553237 MBP02144 154 aa11.1□□□□□ -0.63
CDK4-215ENST00000553237 GPX1P07203 203 aa11.1□□□□□ -0.63
CDK4-215ENST00000553237 CSN1S1P47710 185 aa11.1□□□□□ -0.63
CDK4-215ENST00000553237 CDC34P49427 236 aaPredicted RBP11.1□□□□□ -0.63
CDK4-215ENST00000553237 FAM3BP58499 235 aaPredicted RBP11.1□□□□□ -0.63
CDK4-215ENST00000553237 TMEM78Q5T7P6 136 aa11.1□□□□□ -0.63
CDK4-215ENST00000553237 Q6ZTI0 123 aa11.1□□□□□ -0.63
CDK4-215ENST00000553237 RAB24Q969Q5 203 aa11.1□□□□□ -0.63
CDK4-215ENST00000553237 FAT2Q9NYQ8 4349 aa11.1□□□□□ -0.63
CDK4-215ENST00000553237 TRAV26-1A0A087WT03 109 aa11.09□□□□□ -0.63
CDK4-215ENST00000553237 TAAR5O14804 337 aa11.09□□□□□ -0.63
CDK4-215ENST00000553237 CRISP2P16562 243 aa11.09□□□□□ -0.63
CDK4-215ENST00000553237 HOXA5P20719 270 aa11.09□□□□□ -0.63
CDK4-215ENST00000553237 CCL18P55774 89 aa11.09□□□□□ -0.63
CDK4-215ENST00000553237 DAZ2Q13117 558 aaKnown RBP11.09□□□□□ -0.63
CDK4-215ENST00000553237 PRR9Q5T870 116 aa11.09□□□□□ -0.63
CDK4-215ENST00000553237 Q6ZQT7 251 aa11.09□□□□□ -0.63
CDK4-215ENST00000553237 ZFAND2AQ8N6M9 145 aa11.09□□□□□ -0.63
CDK4-215ENST00000553237 OR11H4Q8NGC9 324 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms