RNA–Protein interactions for RNA: ENST00000553055.1

PFKM-231, Transcript of phosphofructokinase, muscle, human

TSL 5

Gene PFKM, Length 289 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PFKM-231	ENST00000553055	GINS4	Q9BRT9	223 aa		4.9	□□□□□ -1.63
PFKM-231	ENST00000553055	NDFIP1	Q9BT67	221 aa		4.9	□□□□□ -1.63
PFKM-231	ENST00000553055	FXYD6	Q9H0Q3	95 aa		4.9	□□□□□ -1.63
PFKM-231	ENST00000553055	COA4	Q9NYJ1	87 aa		4.9	□□□□□ -1.63
PFKM-231	ENST00000553055	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	4.9	□□□□□ -1.63
PFKM-231	ENST00000553055	MDC1	Q14676	2089 aa	Known RBP	4.9	□□□□□ -1.63
PFKM-231	ENST00000553055	DSCAML1	Q8TD84	2053 aa		4.9	□□□□□ -1.63
PFKM-231	ENST00000553055	DOCK9	Q9BZ29	2069 aa		4.9	□□□□□ -1.63
PFKM-231	ENST00000553055	MAP1A	P78559	2803 aa	Predicted RBP	4.9	□□□□□ -1.63
PFKM-231	ENST00000553055	CUBN	O60494	3623 aa		4.89	□□□□□ -1.63
PFKM-231	ENST00000553055	TRAV36DV7	A0A075B6V5	113 aa		4.89	□□□□□ -1.63
PFKM-231	ENST00000553055	IGKV3D-15	A0A087WSY6	115 aa		4.89	□□□□□ -1.63
PFKM-231	ENST00000553055	C19orf84	I3L1E1	186 aa		4.89	□□□□□ -1.63
PFKM-231	ENST00000553055	IFNG	P01579	166 aa		4.89	□□□□□ -1.63
PFKM-231	ENST00000553055	UCHL1	P09936	223 aa		4.89	□□□□□ -1.63
PFKM-231	ENST00000553055	CDK5R1	Q15078	307 aa		4.89	□□□□□ -1.63
PFKM-231	ENST00000553055	TMEM69	Q5SWH9	247 aa		4.89	□□□□□ -1.63
PFKM-231	ENST00000553055	ZNF660	Q6AZW8	331 aa	Predicted RBP	4.89	□□□□□ -1.63
PFKM-231	ENST00000553055	RPL22L1	Q6P5R6	122 aa	Known RBP	4.89	□□□□□ -1.63
PFKM-231	ENST00000553055	C22orf39	Q6P5X5	142 aa		4.89	□□□□□ -1.63
PFKM-231	ENST00000553055	PRSS54	Q6PEW0	395 aa		4.89	□□□□□ -1.63
PFKM-231	ENST00000553055	ZNF101	Q8IZC7	436 aa		4.89	□□□□□ -1.63
PFKM-231	ENST00000553055	VOPP1	Q96AW1	172 aa		4.89	□□□□□ -1.63
PFKM-231	ENST00000553055	ZNF285	Q96NJ3	590 aa		4.89	□□□□□ -1.63
PFKM-231	ENST00000553055	OR2J1	Q9GZK6	312 aa		4.89	□□□□□ -1.63
PFKM-231	ENST00000553055	CMC2	Q9NRP2	79 aa		4.89	□□□□□ -1.63
PFKM-231	ENST00000553055	HSPB8	Q9UJY1	196 aa		4.89	□□□□□ -1.63
PFKM-231	ENST00000553055		A0A087WYN8	130 aa		4.88	□□□□□ -1.63
PFKM-231	ENST00000553055	TRBV6-6	A0A0A6YYG2	114 aa		4.88	□□□□□ -1.63
PFKM-231	ENST00000553055	UBE2L6	O14933	153 aa		4.88	□□□□□ -1.63
PFKM-231	ENST00000553055	IGKV3-20	P01619	116 aa		4.88	□□□□□ -1.63
PFKM-231	ENST00000553055	POLR2H	P52434	150 aa	Known RBP	4.88	□□□□□ -1.63
PFKM-231	ENST00000553055	INSL4	Q14641	139 aa		4.88	□□□□□ -1.63
PFKM-231	ENST00000553055	KCNRG	Q8N5I3	272 aa		4.88	□□□□□ -1.63
PFKM-231	ENST00000553055	OR5D16	Q8NGK9	328 aa		4.88	□□□□□ -1.63
PFKM-231	ENST00000553055	ARL11	Q969Q4	196 aa		4.88	□□□□□ -1.63
PFKM-231	ENST00000553055	S100A16	Q96FQ6	103 aa	Known RBP	4.88	□□□□□ -1.63
PFKM-231	ENST00000553055	ZNF799	Q96GE5	643 aa		4.88	□□□□□ -1.63
PFKM-231	ENST00000553055	PYGO2	Q9BRQ0	406 aa		4.88	□□□□□ -1.63
PFKM-231	ENST00000553055	OR2D2	Q9H210	308 aa		4.88	□□□□□ -1.63
PFKM-231	ENST00000553055	RNF122	Q9H9V4	155 aa		4.88	□□□□□ -1.63
PFKM-231	ENST00000553055	TNFRSF19	Q9NS68	423 aa		4.88	□□□□□ -1.63
PFKM-231	ENST00000553055	HS3ST2	Q9Y278	367 aa		4.88	□□□□□ -1.63
PFKM-231	ENST00000553055	TRAV38-1	A0A0B4J264	116 aa		4.87	□□□□□ -1.63
PFKM-231	ENST00000553055	SPTY2D1-AS1	A0A0U1RR47	76 aa		4.87	□□□□□ -1.63
PFKM-231	ENST00000553055	TMEM218	A2RU14	115 aa		4.87	□□□□□ -1.63
PFKM-231	ENST00000553055		A6NIN4	97 aa		4.87	□□□□□ -1.63
PFKM-231	ENST00000553055	CPSF4L	A6NMK7	179 aa	Known RBP	4.87	□□□□□ -1.63
PFKM-231	ENST00000553055		J3QLW9	94 aa		4.87	□□□□□ -1.63
PFKM-231	ENST00000553055	SIX6	O95475	246 aa		4.87	□□□□□ -1.63
PFKM-231	ENST00000553055	AKAIN1	P0CW23	69 aa		4.87	□□□□□ -1.63
PFKM-231	ENST00000553055	INAFM2	P0DMQ5	153 aa		4.87	□□□□□ -1.63
PFKM-231	ENST00000553055	SLC25A4	P12235	298 aa		4.87	□□□□□ -1.63
PFKM-231	ENST00000553055	ZNF19	P17023	458 aa		4.87	□□□□□ -1.63
PFKM-231	ENST00000553055	RPL7	P18124	248 aa	Known RBP	4.87	□□□□□ -1.63
PFKM-231	ENST00000553055	HIST1H2BO	P23527	126 aa		4.87	□□□□□ -1.63
PFKM-231	ENST00000553055	HIST1H2BB	P33778	126 aa		4.87	□□□□□ -1.63
PFKM-231	ENST00000553055	RPS10	P46783	165 aa	Known RBP	4.87	□□□□□ -1.63
PFKM-231	ENST00000553055	HIST1H2BD	P58876	126 aa		4.87	□□□□□ -1.63
PFKM-231	ENST00000553055	TAS2R20	P59543	309 aa		4.87	□□□□□ -1.63
PFKM-231	ENST00000553055	RPS11	P62280	158 aa	Known RBP eCLIP	4.87	□□□□□ -1.63
PFKM-231	ENST00000553055	HIST1H2BC	P62807	126 aa		4.87	□□□□□ -1.63
PFKM-231	ENST00000553055	RPL30	P62888	115 aa	Known RBP	4.87	□□□□□ -1.63
PFKM-231	ENST00000553055	CCL20	P78556	96 aa		4.87	□□□□□ -1.63
PFKM-231	ENST00000553055	FUT5	Q11128	374 aa		4.87	□□□□□ -1.63
PFKM-231	ENST00000553055	HIST2H2BE	Q16778	126 aa		4.87	□□□□□ -1.63
PFKM-231	ENST00000553055	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	4.87	□□□□□ -1.63
PFKM-231	ENST00000553055	C10orf91	Q5T1B1	145 aa		4.87	□□□□□ -1.63
PFKM-231	ENST00000553055	MIR7-3HG	Q8N6C7	128 aa		4.87	□□□□□ -1.63
PFKM-231	ENST00000553055	DAND5	Q8N907	189 aa		4.87	□□□□□ -1.63
PFKM-231	ENST00000553055	SFT2D1	Q8WV19	159 aa		4.87	□□□□□ -1.63
PFKM-231	ENST00000553055	HIST1H2BH	Q93079	126 aa		4.87	□□□□□ -1.63
PFKM-231	ENST00000553055	RBMXL1	Q96E39	390 aa	Known RBP	4.87	□□□□□ -1.63
PFKM-231	ENST00000553055	HIST1H2BN	Q99877	126 aa		4.87	□□□□□ -1.63
PFKM-231	ENST00000553055	HIST1H2BM	Q99879	126 aa		4.87	□□□□□ -1.63
PFKM-231	ENST00000553055	RTL8A	Q9BWD3	113 aa		4.87	□□□□□ -1.63
PFKM-231	ENST00000553055	ZNF586	Q9NXT0	402 aa		4.87	□□□□□ -1.63
PFKM-231	ENST00000553055	CELA1	Q9UNI1	258 aa		4.87	□□□□□ -1.63
PFKM-231	ENST00000553055	KLK5	Q9Y337	293 aa	Predicted RBP	4.87	□□□□□ -1.63
PFKM-231	ENST00000553055	IFITM5	A6NNB3	132 aa		4.86	□□□□□ -1.63
PFKM-231	ENST00000553055	NTF3	P20783	257 aa		4.86	□□□□□ -1.63
PFKM-231	ENST00000553055	S100P	P25815	95 aa		4.86	□□□□□ -1.63
PFKM-231	ENST00000553055	GABRA2	P47869	451 aa		4.86	□□□□□ -1.63
PFKM-231	ENST00000553055	DCD	P81605	110 aa	Known RBP	4.86	□□□□□ -1.63
PFKM-231	ENST00000553055	PSG9	Q00887	426 aa		4.86	□□□□□ -1.63
PFKM-231	ENST00000553055	CCSMST1	Q4G0I0	132 aa		4.86	□□□□□ -1.63
PFKM-231	ENST00000553055	C14orf177	Q52M58	125 aa		4.86	□□□□□ -1.63
PFKM-231	ENST00000553055		Q6ZTC4	211 aa		4.86	□□□□□ -1.63
PFKM-231	ENST00000553055	ZNF329	Q86UD4	541 aa		4.86	□□□□□ -1.63
PFKM-231	ENST00000553055	ZFP62	Q8NB50	900 aa	Predicted RBP	4.86	□□□□□ -1.63
PFKM-231	ENST00000553055	WFDC11	Q8NEX6	87 aa		4.86	□□□□□ -1.63
PFKM-231	ENST00000553055	WFDC5	Q8TCV5	224 aa		4.86	□□□□□ -1.63
PFKM-231	ENST00000553055	RPS4Y2	Q8TD47	263 aa		4.86	□□□□□ -1.63
PFKM-231	ENST00000553055	SLC25A21	Q9BQT8	299 aa	Predicted RBP	4.86	□□□□□ -1.63
PFKM-231	ENST00000553055	WFDC6	Q9BQY6	131 aa		4.86	□□□□□ -1.63
PFKM-231	ENST00000553055	SEC11C	Q9BY50	192 aa		4.86	□□□□□ -1.63
PFKM-231	ENST00000553055	TCEAL2	Q9H3H9	227 aa	Predicted RBP	4.86	□□□□□ -1.63
PFKM-231	ENST00000553055	ZNF443	Q9Y2A4	671 aa	Predicted RBP	4.86	□□□□□ -1.63
PFKM-231	ENST00000553055	TRAPPC1	Q9Y5R8	145 aa		4.86	□□□□□ -1.63
PFKM-231	ENST00000553055	HIVEP2	P31629	2446 aa		4.86	□□□□□ -1.63

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