RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 AMTNQ6UX39 209 aa7.48□□□□□ -1.21
TRAFD1-208ENST00000552890 IQCF2Q8IXL9 164 aa7.48□□□□□ -1.21
TRAFD1-208ENST00000552890 HIST1H2BAQ96A08 127 aa7.48□□□□□ -1.21
TRAFD1-208ENST00000552890 SH3BGRL3Q9H299 93 aa7.48□□□□□ -1.21
TRAFD1-208ENST00000552890 AGRNO00468 2067 aa7.48□□□□□ -1.21
TRAFD1-208ENST00000552890 hCG_2014768A0A024R1R8 64 aa7.47□□□□□ -1.21
TRAFD1-208ENST00000552890 MAP1LC3B2A6NCE7 125 aa7.47□□□□□ -1.21
TRAFD1-208ENST00000552890 S100A9P06702 114 aaKnown RBP7.47□□□□□ -1.21
TRAFD1-208ENST00000552890 GPX1P07203 203 aa7.47□□□□□ -1.21
TRAFD1-208ENST00000552890 GIG44P09565 113 aaPredicted RBP7.47□□□□□ -1.21
TRAFD1-208ENST00000552890 H2AFB1P0C5Y9 115 aa7.47□□□□□ -1.21
TRAFD1-208ENST00000552890 SPART-AS1P0CW21 52 aa7.47□□□□□ -1.21
TRAFD1-208ENST00000552890 CRISP2P16562 243 aa7.47□□□□□ -1.21
TRAFD1-208ENST00000552890 TCTAP57738 103 aa7.47□□□□□ -1.21
TRAFD1-208ENST00000552890 SPINK13Q1W4C9 94 aa7.47□□□□□ -1.21
TRAFD1-208ENST00000552890 SAPCD1Q5SSQ6 148 aa7.47□□□□□ -1.21
TRAFD1-208ENST00000552890 IGFL4Q6B9Z1 124 aa7.47□□□□□ -1.21
TRAFD1-208ENST00000552890 EXOC3-AS1Q8N2X6 119 aa7.47□□□□□ -1.21
TRAFD1-208ENST00000552890 C11orf45Q8TAV5 145 aa7.47□□□□□ -1.21
TRAFD1-208ENST00000552890 LINC01587Q99440 93 aa7.47□□□□□ -1.21
TRAFD1-208ENST00000552890 PYGO2Q9BRQ0 406 aa7.47□□□□□ -1.21
TRAFD1-208ENST00000552890 MAP1LC3BQ9GZQ8 125 aa7.47□□□□□ -1.21
TRAFD1-208ENST00000552890 SLC35B3Q9H1N7 401 aa7.47□□□□□ -1.21
TRAFD1-208ENST00000552890 A0A0J9YWU9 116 aa7.46□□□□□ -1.22
TRAFD1-208ENST00000552890 CXorf65A6NEN9 183 aa7.46□□□□□ -1.22
TRAFD1-208ENST00000552890 LYRM9A8MSI8 78 aa7.46□□□□□ -1.22
TRAFD1-208ENST00000552890 DIRC3C9JPN6 131 aa7.46□□□□□ -1.22
TRAFD1-208ENST00000552890 H3BTX0 84 aa7.46□□□□□ -1.22
TRAFD1-208ENST00000552890 IFNA1P01562 189 aa7.46□□□□□ -1.22
TRAFD1-208ENST00000552890 IFNA7P01567 189 aa7.46□□□□□ -1.22
TRAFD1-208ENST00000552890 ZNF680Q8NEM1 530 aa7.46□□□□□ -1.22
TRAFD1-208ENST00000552890 SFT2D1Q8WV19 159 aa7.46□□□□□ -1.22
TRAFD1-208ENST00000552890 MBD3L1Q8WWY6 194 aa7.46□□□□□ -1.22
TRAFD1-208ENST00000552890 ZNF503Q96F45 646 aa7.46□□□□□ -1.22
TRAFD1-208ENST00000552890 C16orf74Q96GX8 76 aa7.46□□□□□ -1.22
TRAFD1-208ENST00000552890 ATG101Q9BSB4 218 aa7.46□□□□□ -1.22
TRAFD1-208ENST00000552890 RETNQ9HD89 108 aa7.46□□□□□ -1.22
TRAFD1-208ENST00000552890 ZNF492Q9P255 531 aa7.46□□□□□ -1.22
TRAFD1-208ENST00000552890 IGHV3OR16-12A0A075B7B8 117 aa7.45□□□□□ -1.22
TRAFD1-208ENST00000552890 TRAV1-1A0A0B4J248 108 aa7.45□□□□□ -1.22
TRAFD1-208ENST00000552890 M0R2Z0 102 aa7.45□□□□□ -1.22
TRAFD1-208ENST00000552890 M0R3E3 92 aa7.45□□□□□ -1.22
TRAFD1-208ENST00000552890 SNRPCP09234 159 aaKnown RBP7.45□□□□□ -1.22
TRAFD1-208ENST00000552890 HLA-DMBP28068 263 aa7.45□□□□□ -1.22
TRAFD1-208ENST00000552890 SUMO1P63165 101 aaKnown RBP7.45□□□□□ -1.22
TRAFD1-208ENST00000552890 CYB561D1Q8N8Q1 229 aa7.45□□□□□ -1.22
TRAFD1-208ENST00000552890 Q8NAQ8 132 aa7.45□□□□□ -1.22
TRAFD1-208ENST00000552890 FAM213BQ8TBF2 198 aa7.45□□□□□ -1.22
TRAFD1-208ENST00000552890 LINC00467Q9BRT7 94 aa7.45□□□□□ -1.22
TRAFD1-208ENST00000552890 AGPAT4-IT1Q9H0P7 198 aa7.45□□□□□ -1.22
TRAFD1-208ENST00000552890 MANBALQ9NQG1 85 aa7.45□□□□□ -1.22
TRAFD1-208ENST00000552890 EPDR1Q9UM22 224 aa7.45□□□□□ -1.22
TRAFD1-208ENST00000552890 IGHV4-28A0A0C4DH34 117 aa7.44□□□□□ -1.22
TRAFD1-208ENST00000552890 LOC102723971A0A1B0GUV8 181 aa7.44□□□□□ -1.22
TRAFD1-208ENST00000552890 C7orf71A4D174 169 aa7.44□□□□□ -1.22
TRAFD1-208ENST00000552890 KLLNB2CW77 178 aa7.44□□□□□ -1.22
TRAFD1-208ENST00000552890 CT45A10P0DMU9 189 aa7.44□□□□□ -1.22
TRAFD1-208ENST00000552890 SULT1A2P50226 295 aa7.44□□□□□ -1.22
TRAFD1-208ENST00000552890 BLOC1S1P78537 153 aa7.44□□□□□ -1.22
TRAFD1-208ENST00000552890 TMEM75Q8N9X5 138 aa7.44□□□□□ -1.22
TRAFD1-208ENST00000552890 TMEM263Q8WUH6 116 aaKnown RBP7.44□□□□□ -1.22
TRAFD1-208ENST00000552890 FAM210BQ96KR6 192 aa7.44□□□□□ -1.22
TRAFD1-208ENST00000552890 TIMM8BQ9Y5J9 83 aaPredicted RBP7.44□□□□□ -1.22
TRAFD1-208ENST00000552890 X6R8D5 127 aa7.44□□□□□ -1.22
TRAFD1-208ENST00000552890 SNURFLB1AK76 121 aa7.43□□□□□ -1.22
TRAFD1-208ENST00000552890 PRAC2D3DTV9 90 aa7.43□□□□□ -1.22
TRAFD1-208ENST00000552890 RGS13O14921 159 aa7.43□□□□□ -1.22
TRAFD1-208ENST00000552890 TCRAP04437 139 aa7.43□□□□□ -1.22
TRAFD1-208ENST00000552890 FXYD7P58549 80 aa7.43□□□□□ -1.22
TRAFD1-208ENST00000552890 PMS2P11Q13670 270 aa7.43□□□□□ -1.22
TRAFD1-208ENST00000552890 GOLT1AQ6ZVE7 132 aa7.43□□□□□ -1.22
TRAFD1-208ENST00000552890 KCNS1Q96KK3 526 aa7.43□□□□□ -1.22
TRAFD1-208ENST00000552890 FAM19A4Q96LR4 140 aa7.43□□□□□ -1.22
TRAFD1-208ENST00000552890 ZFP30Q9Y2G7 519 aa7.43□□□□□ -1.22
TRAFD1-208ENST00000552890 IGKV2-40A0A087WW87 121 aaPredicted RBP7.42□□□□□ -1.22
TRAFD1-208ENST00000552890 TRAV10A0A0B4J240 114 aa7.42□□□□□ -1.22
TRAFD1-208ENST00000552890 TRAV21A0A0B4J279 112 aa7.42□□□□□ -1.22
TRAFD1-208ENST00000552890 CRXO43186 299 aaPredicted RBP7.42□□□□□ -1.22
TRAFD1-208ENST00000552890 IGKV2D-40P01614 121 aaPredicted RBP7.42□□□□□ -1.22
TRAFD1-208ENST00000552890 DEFB1P60022 68 aa7.42□□□□□ -1.22
TRAFD1-208ENST00000552890 ANXA2RQ3ZCQ2 193 aa7.42□□□□□ -1.22
TRAFD1-208ENST00000552890 GFI1BQ5VTD9 330 aa7.42□□□□□ -1.22
TRAFD1-208ENST00000552890 CST9LP1Q5W188 147 aa7.42□□□□□ -1.22
TRAFD1-208ENST00000552890 FAM159AQ6UWV7 190 aa7.42□□□□□ -1.22
TRAFD1-208ENST00000552890 C1orf158Q8N1D5 194 aa7.42□□□□□ -1.22
TRAFD1-208ENST00000552890 C9orf62Q8N4C0 152 aa7.42□□□□□ -1.22
TRAFD1-208ENST00000552890 EIF4E3Q8N5X7 224 aaKnown RBP7.42□□□□□ -1.22
TRAFD1-208ENST00000552890 FMC1Q96HJ9 113 aa7.42□□□□□ -1.22
TRAFD1-208ENST00000552890 VGLL1Q99990 258 aa7.42□□□□□ -1.22
TRAFD1-208ENST00000552890 TREM1Q9NP99 234 aa7.42□□□□□ -1.22
TRAFD1-208ENST00000552890 TRAV12-2A0A075B6T6 113 aa7.41□□□□□ -1.22
TRAFD1-208ENST00000552890 FAM74A7A6NL05 159 aa7.41□□□□□ -1.22
TRAFD1-208ENST00000552890 PDE6DO43924 150 aa7.41□□□□□ -1.22
TRAFD1-208ENST00000552890 RNASE4P34096 147 aaKnown RBP7.41□□□□□ -1.22
TRAFD1-208ENST00000552890 UBE2G1P62253 170 aa7.41□□□□□ -1.22
TRAFD1-208ENST00000552890 FLI1Q01543 452 aaPredicted RBP7.41□□□□□ -1.22
TRAFD1-208ENST00000552890 SMUG1Q53HV7 270 aa7.41□□□□□ -1.22
TRAFD1-208ENST00000552890 IBA57Q5T440 356 aaKnown RBP7.41□□□□□ -1.22
TRAFD1-208ENST00000552890 CASC10Q5T4H9 136 aa7.41□□□□□ -1.22
TRAFD1-208ENST00000552890 CEMP1Q6PRD7 247 aaPredicted RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms