RNA–Protein interactions for RNA: ENST00000552215.5

CHPT1-208, Transcript of choline phosphotransferase 1, humanhuman

TSL 1 (best)

Gene CHPT1, Length 4,342 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-208ENST00000552215 H3BRN7 92 aa6.23□□□□□ -1.41
CHPT1-208ENST00000552215 KCNIP4Q6PIL6 250 aa6.23□□□□□ -1.41
CHPT1-208ENST00000552215 TMEM158Q8WZ71 300 aa6.23□□□□□ -1.41
CHPT1-208ENST00000552215 TXN2Q99757 166 aa6.23□□□□□ -1.41
CHPT1-208ENST00000552215 TMEM183BQ1AE95 376 aa6.23□□□□□ -1.41
CHPT1-208ENST00000552215 TMEM183AQ8IXX5 376 aa6.23□□□□□ -1.41
CHPT1-208ENST00000552215 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.23□□□□□ -1.41
CHPT1-208ENST00000552215 ZNF503Q96F45 646 aa6.23□□□□□ -1.41
CHPT1-208ENST00000552215 ZNF414Q96IQ9 312 aa6.23□□□□□ -1.41
CHPT1-208ENST00000552215 FAM167A-AS1Q96KT0 104 aa6.23□□□□□ -1.41
CHPT1-208ENST00000552215 OTORQ9NRC9 128 aa6.23□□□□□ -1.41
CHPT1-208ENST00000552215 SMCO4Q9NRQ5 59 aa6.23□□□□□ -1.41
CHPT1-208ENST00000552215 NAT8BQ9UHF3 227 aa6.23□□□□□ -1.41
CHPT1-208ENST00000552215 ARL2-SNX15V9GYD0 113 aa6.23□□□□□ -1.41
CHPT1-208ENST00000552215 TGIF2-C20orf24A0A0A6YYL0 155 aa6.22□□□□□ -1.41
CHPT1-208ENST00000552215 TWIST1Q15672 202 aa6.22□□□□□ -1.41
CHPT1-208ENST00000552215 GPR61Q9BZJ8 451 aa6.22□□□□□ -1.41
CHPT1-208ENST00000552215 TENM1Q9UKZ4 2725 aa6.22□□□□□ -1.41
CHPT1-208ENST00000552215 TMEM213A2RRL7 107 aa6.22□□□□□ -1.41
CHPT1-208ENST00000552215 F8W735 103 aaPredicted RBP6.22□□□□□ -1.41
CHPT1-208ENST00000552215 PSG3Q16557 428 aa6.22□□□□□ -1.41
CHPT1-208ENST00000552215 SMUG1Q53HV7 270 aa6.22□□□□□ -1.41
CHPT1-208ENST00000552215 FAM159AQ6UWV7 190 aa6.22□□□□□ -1.41
CHPT1-208ENST00000552215 DEFB125Q8N687 156 aa6.22□□□□□ -1.41
CHPT1-208ENST00000552215 ATG101Q9BSB4 218 aa6.22□□□□□ -1.41
CHPT1-208ENST00000552215 SSBP4Q9BWG4 385 aaPredicted RBP6.22□□□□□ -1.41
CHPT1-208ENST00000552215 LOC389332A0A1B0GUA5 103 aa6.22□□□□□ -1.41
CHPT1-208ENST00000552215 FOSL1P15407 271 aa6.22□□□□□ -1.41
CHPT1-208ENST00000552215 RPL23P62829 140 aaKnown RBP6.22□□□□□ -1.41
CHPT1-208ENST00000552215 VWC2Q2TAL6 325 aa6.22□□□□□ -1.41
CHPT1-208ENST00000552215 TRBV9A0A0B4J1U6 114 aa6.21□□□□□ -1.41
CHPT1-208ENST00000552215 A0A1W2PRE2 83 aa6.21□□□□□ -1.41
CHPT1-208ENST00000552215 ADCYAP1P18509 176 aa6.21□□□□□ -1.41
CHPT1-208ENST00000552215 NTF3P20783 257 aa6.21□□□□□ -1.41
CHPT1-208ENST00000552215 FOXA3P55318 350 aaPredicted RBP6.21□□□□□ -1.41
CHPT1-208ENST00000552215 IMMP2LQ96T52 175 aa6.21□□□□□ -1.41
CHPT1-208ENST00000552215 SAV1Q9H4B6 383 aaPredicted RBP6.21□□□□□ -1.41
CHPT1-208ENST00000552215 MRPL27Q9P0M9 148 aaKnown RBP6.21□□□□□ -1.41
CHPT1-208ENST00000552215 IGLV1-40P01703 118 aa6.21□□□□□ -1.42
CHPT1-208ENST00000552215 NDUFA6P56556 154 aa6.21□□□□□ -1.42
CHPT1-208ENST00000552215 UQCC3Q6UW78 93 aa6.21□□□□□ -1.42
CHPT1-208ENST00000552215 TMEM86BQ8N661 226 aa6.21□□□□□ -1.42
CHPT1-208ENST00000552215 SEC11CQ9BY50 192 aa6.21□□□□□ -1.42
CHPT1-208ENST00000552215 FBN1P35555 2871 aaKnown RBP6.21□□□□□ -1.42
CHPT1-208ENST00000552215 H3BVH4 76 aa6.21□□□□□ -1.42
CHPT1-208ENST00000552215 DEFB130BP0DP73 79 aa6.21□□□□□ -1.42
CHPT1-208ENST00000552215 DEFB130AP0DP74 79 aa6.21□□□□□ -1.42
CHPT1-208ENST00000552215 GDF5OSQ5U4N7 250 aa6.21□□□□□ -1.42
CHPT1-208ENST00000552215 Q6ZQT7 251 aa6.21□□□□□ -1.42
CHPT1-208ENST00000552215 GPR82Q96P67 336 aa6.21□□□□□ -1.42
CHPT1-208ENST00000552215 GP9P14770 177 aa6.21□□□□□ -1.42
CHPT1-208ENST00000552215 SMIM15Q7Z3B0 74 aa6.21□□□□□ -1.42
CHPT1-208ENST00000552215 C4orf3Q8WVX3 66 aa6.21□□□□□ -1.42
CHPT1-208ENST00000552215 PHLDA3Q9Y5J5 127 aa6.21□□□□□ -1.42
CHPT1-208ENST00000552215 B4DEV8 164 aa6.2□□□□□ -1.42
CHPT1-208ENST00000552215 SMIM17P0DL12 118 aa6.2□□□□□ -1.42
CHPT1-208ENST00000552215 FABP4P15090 132 aa6.2□□□□□ -1.42
CHPT1-208ENST00000552215 HIST1H2BAQ96A08 127 aa6.2□□□□□ -1.42
CHPT1-208ENST00000552215 SFRP2Q96HF1 295 aa6.2□□□□□ -1.42
CHPT1-208ENST00000552215 AGPAT4-IT1Q9H0P7 198 aa6.2□□□□□ -1.42
CHPT1-208ENST00000552215 S100A2P29034 98 aa6.2□□□□□ -1.42
CHPT1-208ENST00000552215 SLC50A1Q9BRV3 221 aa6.2□□□□□ -1.42
CHPT1-208ENST00000552215 AARDQ4LEZ3 155 aa6.2□□□□□ -1.42
CHPT1-208ENST00000552215 FAM90A2PQ658T7 463 aa6.2□□□□□ -1.42
CHPT1-208ENST00000552215 BAGE3Q86Y29 109 aa6.2□□□□□ -1.42
CHPT1-208ENST00000552215 WI2-2373I1.2A0A1W2PRP0 233 aa6.19□□□□□ -1.42
CHPT1-208ENST00000552215 C1orf196B1AJZ1 125 aa6.19□□□□□ -1.42
CHPT1-208ENST00000552215 FAM210BQ96KR6 192 aa6.19□□□□□ -1.42
CHPT1-208ENST00000552215 ZFAND3Q9H8U3 227 aa6.19□□□□□ -1.42
CHPT1-208ENST00000552215 SNURFLB1AK76 121 aa6.19□□□□□ -1.42
CHPT1-208ENST00000552215 DIRC3C9JPN6 131 aa6.19□□□□□ -1.42
CHPT1-208ENST00000552215 RRN3P1Q2M238 152 aa6.19□□□□□ -1.42
CHPT1-208ENST00000552215 OR8A1Q8NGG7 326 aa6.19□□□□□ -1.42
CHPT1-208ENST00000552215 C20orf173Q96LM9 149 aa6.19□□□□□ -1.42
CHPT1-208ENST00000552215 IGHV3-16A0A0C4DH30 117 aa6.19□□□□□ -1.42
CHPT1-208ENST00000552215 XKRY2A2RUG3 117 aa6.19□□□□□ -1.42
CHPT1-208ENST00000552215 FNDC10F2Z333 226 aa6.19□□□□□ -1.42
CHPT1-208ENST00000552215 H3BUA1 57 aa6.19□□□□□ -1.42
CHPT1-208ENST00000552215 FSHBP01225 129 aa6.19□□□□□ -1.42
CHPT1-208ENST00000552215 NUTF2P61970 127 aaKnown RBP6.19□□□□□ -1.42
CHPT1-208ENST00000552215 C9orf139Q6ZV77 190 aa6.19□□□□□ -1.42
CHPT1-208ENST00000552215 SMAD5-AS1Q9Y6J3 95 aa6.19□□□□□ -1.42
CHPT1-208ENST00000552215 TMEM250H0YL14 139 aa6.18□□□□□ -1.42
CHPT1-208ENST00000552215 CD5P06127 495 aa6.18□□□□□ -1.42
CHPT1-208ENST00000552215 ZNF138P52744 262 aa6.18□□□□□ -1.42
CHPT1-208ENST00000552215 TCTAP57738 103 aa6.18□□□□□ -1.42
CHPT1-208ENST00000552215 NUDT10Q8NFP7 164 aa6.18□□□□□ -1.42
CHPT1-208ENST00000552215 NUDT11Q96G61 164 aa6.18□□□□□ -1.42
CHPT1-208ENST00000552215 FAM110AQ9BQ89 295 aa6.18□□□□□ -1.42
CHPT1-208ENST00000552215 SDF2L1Q9HCN8 221 aa6.18□□□□□ -1.42
CHPT1-208ENST00000552215 BIN3Q9NQY0 253 aa6.18□□□□□ -1.42
CHPT1-208ENST00000552215 TRAPPC1Q9Y5R8 145 aa6.18□□□□□ -1.42
CHPT1-208ENST00000552215 HIGD1CA8MV81 97 aa6.18□□□□□ -1.42
CHPT1-208ENST00000552215 GNRH2O43555 120 aa6.18□□□□□ -1.42
CHPT1-208ENST00000552215 PROK1P58294 105 aa6.18□□□□□ -1.42
CHPT1-208ENST00000552215 GPHB5Q86YW7 130 aa6.18□□□□□ -1.42
CHPT1-208ENST00000552215 ZNF469Q96JG9 3925 aaPredicted RBP6.18□□□□□ -1.42
CHPT1-208ENST00000552215 C16orf54Q6UWD8 224 aa6.18□□□□□ -1.42
CHPT1-208ENST00000552215 LINC01551Q86U37 167 aa6.18□□□□□ -1.42
CHPT1-208ENST00000552215 TRGV2A0A075B6R0 118 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms