RNA–Protein interactions for RNA: ENST00000552188.1

CCDC65-204, Transcript of coiled-coil domain containing 65, humanhuman

TSL 3

Gene CCDC65, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-204ENST00000552188 MIR17HGQ75NE6 70 aa4.26□□□□□ -1.73
CCDC65-204ENST00000552188 SLC7A5P1Q8MH63 180 aa4.26□□□□□ -1.73
CCDC65-204ENST00000552188 C1orf158Q8N1D5 194 aa4.26□□□□□ -1.73
CCDC65-204ENST00000552188 TMEM256Q8N2U0 113 aa4.26□□□□□ -1.73
CCDC65-204ENST00000552188 NHLRC2Q8NBF2 726 aa4.26□□□□□ -1.73
CCDC65-204ENST00000552188 ASB13Q8WXK3 278 aa4.26□□□□□ -1.73
CCDC65-204ENST00000552188 SAT2Q96F10 170 aaPredicted RBP4.26□□□□□ -1.73
CCDC65-204ENST00000552188 SLC25A2Q9BXI2 301 aa4.26□□□□□ -1.73
CCDC65-204ENST00000552188 ZNF586Q9NXT0 402 aa4.26□□□□□ -1.73
CCDC65-204ENST00000552188 TMEM14CQ9P0S9 112 aa4.26□□□□□ -1.73
CCDC65-204ENST00000552188 FUT9Q9Y231 359 aa4.26□□□□□ -1.73
CCDC65-204ENST00000552188 TRBV19A0A075B6N1 114 aa4.25□□□□□ -1.73
CCDC65-204ENST00000552188 DEFB131BA0A096LNP1 70 aa4.25□□□□□ -1.73
CCDC65-204ENST00000552188 BORCS7-ASMTA0A0B4J1R7 106 aa4.25□□□□□ -1.73
CCDC65-204ENST00000552188 SERTM2A0A1B0GWG4 89 aa4.25□□□□□ -1.73
CCDC65-204ENST00000552188 A8MTW9 85 aa4.25□□□□□ -1.73
CCDC65-204ENST00000552188 ZNF705GA8MUZ8 300 aaPredicted RBP4.25□□□□□ -1.73
CCDC65-204ENST00000552188 PRAC2D3DTV9 90 aa4.25□□□□□ -1.73
CCDC65-204ENST00000552188 H0Y8G0 127 aa4.25□□□□□ -1.73
CCDC65-204ENST00000552188 SLC17A3O00476 420 aa4.25□□□□□ -1.73
CCDC65-204ENST00000552188 PAGE4O60829 102 aa4.25□□□□□ -1.73
CCDC65-204ENST00000552188 ZNF253O75346 499 aa4.25□□□□□ -1.73
CCDC65-204ENST00000552188 OR10J4P0C629 311 aa4.25□□□□□ -1.73
CCDC65-204ENST00000552188 HTN3P15516 51 aa4.25□□□□□ -1.73
CCDC65-204ENST00000552188 M6PRP20645 277 aa4.25□□□□□ -1.73
CCDC65-204ENST00000552188 TCTAP57738 103 aa4.25□□□□□ -1.73
CCDC65-204ENST00000552188 TIRAPP58753 221 aa4.25□□□□□ -1.73
CCDC65-204ENST00000552188 DAD1P61803 113 aa4.25□□□□□ -1.73
CCDC65-204ENST00000552188 UBE2L3P68036 154 aaKnown RBP4.25□□□□□ -1.73
CCDC65-204ENST00000552188 PDE6HQ13956 83 aa4.25□□□□□ -1.73
CCDC65-204ENST00000552188 ICAM4Q14773 271 aa4.25□□□□□ -1.73
CCDC65-204ENST00000552188 KHDC3LQ587J8 217 aa4.25□□□□□ -1.73
CCDC65-204ENST00000552188 FAM74A1Q5RGS3 127 aa4.25□□□□□ -1.73
CCDC65-204ENST00000552188 TMEM78Q5T7P6 136 aa4.25□□□□□ -1.73
CCDC65-204ENST00000552188 FAM122CQ6P4D5 195 aa4.25□□□□□ -1.73
CCDC65-204ENST00000552188 AMTNQ6UX39 209 aa4.25□□□□□ -1.73
CCDC65-204ENST00000552188 Q6ZTC4 211 aa4.25□□□□□ -1.73
CCDC65-204ENST00000552188 BAP18Q8IXM2 172 aa4.25□□□□□ -1.73
CCDC65-204ENST00000552188 EXOC3-AS1Q8N2X6 119 aa4.25□□□□□ -1.73
CCDC65-204ENST00000552188 RPP25LQ8N5L8 163 aaKnown RBP4.25□□□□□ -1.73
CCDC65-204ENST00000552188 HSD17B11Q8NBQ5 300 aa4.25□□□□□ -1.73
CCDC65-204ENST00000552188 MRPL53Q96EL3 112 aaKnown RBP4.25□□□□□ -1.73
CCDC65-204ENST00000552188 LINC00477Q96M19 166 aa4.25□□□□□ -1.73
CCDC65-204ENST00000552188 C20orf144Q9BQM9 153 aa4.25□□□□□ -1.73
CCDC65-204ENST00000552188 NIPSNAP3BQ9BS92 247 aa4.25□□□□□ -1.73
CCDC65-204ENST00000552188 YTHDF2Q9Y5A9 579 aaKnown RBP4.25□□□□□ -1.73
CCDC65-204ENST00000552188 TRAV12-3A0A0B4J271 114 aa4.24□□□□□ -1.73
CCDC65-204ENST00000552188 SNURFLB1AK76 121 aa4.24□□□□□ -1.73
CCDC65-204ENST00000552188 H7BYZ3 331 aa4.24□□□□□ -1.73
CCDC65-204ENST00000552188 M0R3E3 92 aa4.24□□□□□ -1.73
CCDC65-204ENST00000552188 MBP02144 154 aa4.24□□□□□ -1.73
CCDC65-204ENST00000552188 GPX1P07203 203 aa4.24□□□□□ -1.73
CCDC65-204ENST00000552188 RANP62826 216 aaKnown RBP4.24□□□□□ -1.73
CCDC65-204ENST00000552188 C12orf74Q32Q52 190 aa4.24□□□□□ -1.73
CCDC65-204ENST00000552188 FAM222AQ5U5X8 452 aa4.24□□□□□ -1.73
CCDC65-204ENST00000552188 OR10G4Q8NGN3 311 aa4.24□□□□□ -1.73
CCDC65-204ENST00000552188 OR10G9Q8NGN4 311 aa4.24□□□□□ -1.73
CCDC65-204ENST00000552188 OR10G7Q8NGN6 311 aa4.24□□□□□ -1.73
CCDC65-204ENST00000552188 OR2T35Q8NGX2 323 aa4.24□□□□□ -1.73
CCDC65-204ENST00000552188 CMTM2Q8TAZ6 248 aa4.24□□□□□ -1.73
CCDC65-204ENST00000552188 HYLS1Q96M11 299 aa4.24□□□□□ -1.73
CCDC65-204ENST00000552188 AQP10Q96PS8 301 aa4.24□□□□□ -1.73
CCDC65-204ENST00000552188 TPPP3Q9BW30 176 aa4.24□□□□□ -1.73
CCDC65-204ENST00000552188 PARD6GQ9BYG4 376 aaPredicted RBP4.24□□□□□ -1.73
CCDC65-204ENST00000552188 WFDC1Q9HC57 220 aa4.24□□□□□ -1.73
CCDC65-204ENST00000552188 RPH3ALQ9UNE2 315 aa4.24□□□□□ -1.73
CCDC65-204ENST00000552188 CELA1Q9UNI1 258 aa4.24□□□□□ -1.73
CCDC65-204ENST00000552188 CSMD3Q7Z407 3707 aa4.23□□□□□ -1.73
CCDC65-204ENST00000552188 IGHV4-4A0A075B6R2 117 aa4.23□□□□□ -1.73
CCDC65-204ENST00000552188 IGKV2-40A0A087WW87 121 aaPredicted RBP4.23□□□□□ -1.73
CCDC65-204ENST00000552188 PGPA6NDG6 321 aa4.23□□□□□ -1.73
CCDC65-204ENST00000552188 LYRM9A8MSI8 78 aa4.23□□□□□ -1.73
CCDC65-204ENST00000552188 HSBP1L1C9JCN9 74 aa4.23□□□□□ -1.73
CCDC65-204ENST00000552188 HMGB3O15347 200 aaKnown RBP4.23□□□□□ -1.73
CCDC65-204ENST00000552188 CRXO43186 299 aaPredicted RBP4.23□□□□□ -1.73
CCDC65-204ENST00000552188 IGKV2D-40P01614 121 aaPredicted RBP4.23□□□□□ -1.73
CCDC65-204ENST00000552188 SLC25A5P05141 298 aaKnown RBP4.23□□□□□ -1.73
CCDC65-204ENST00000552188 CT45A10P0DMU9 189 aa4.23□□□□□ -1.73
CCDC65-204ENST00000552188 DEFB130BP0DP73 79 aa4.23□□□□□ -1.73
CCDC65-204ENST00000552188 DEFB130AP0DP74 79 aa4.23□□□□□ -1.73
CCDC65-204ENST00000552188 ATP6V0CP27449 155 aa4.23□□□□□ -1.73
CCDC65-204ENST00000552188 CDC34P49427 236 aaPredicted RBP4.23□□□□□ -1.73
CCDC65-204ENST00000552188 TAS2R60P59551 318 aa4.23□□□□□ -1.73
CCDC65-204ENST00000552188 RAB2AP61019 212 aa4.23□□□□□ -1.73
CCDC65-204ENST00000552188 SERF2P84101 59 aa4.23□□□□□ -1.73
CCDC65-204ENST00000552188 ERCC8Q13216 396 aa4.23□□□□□ -1.73
CCDC65-204ENST00000552188 OXA1LQ15070 435 aa4.23□□□□□ -1.73
CCDC65-204ENST00000552188 PQLC2Q6ZP29 291 aa4.23□□□□□ -1.73
CCDC65-204ENST00000552188 ZNF493Q6ZR52 646 aa4.23□□□□□ -1.73
CCDC65-204ENST00000552188 LYPD1Q8N2G4 141 aa4.23□□□□□ -1.73
CCDC65-204ENST00000552188 SYT8Q8NBV8 401 aa4.23□□□□□ -1.73
CCDC65-204ENST00000552188 RXFP4Q8TDU9 374 aa4.23□□□□□ -1.73
CCDC65-204ENST00000552188 LINC00476Q8WZB0 136 aa4.23□□□□□ -1.73
CCDC65-204ENST00000552188 FXYD5Q96DB9 178 aa4.23□□□□□ -1.73
CCDC65-204ENST00000552188 GNPNAT1Q96EK6 184 aaPredicted RBP4.23□□□□□ -1.73
CCDC65-204ENST00000552188 C16orf74Q96GX8 76 aa4.23□□□□□ -1.73
CCDC65-204ENST00000552188 FAM167A-AS1Q96KT0 104 aa4.23□□□□□ -1.73
CCDC65-204ENST00000552188 ODF3Q96PU9 254 aa4.23□□□□□ -1.73
CCDC65-204ENST00000552188 PSMG3Q9BT73 122 aaPredicted RBP4.23□□□□□ -1.73
CCDC65-204ENST00000552188 NDUFAF3Q9BU61 184 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms