RNA–Protein interactions for RNA: ENST00000551920.1

GCN1-209, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-209ENST00000551920 TMPRSS5Q9H3S3 457 aa11.77□□□□□ -0.53
GCN1-209ENST00000551920 CELA1Q9UNI1 258 aa11.77□□□□□ -0.53
GCN1-209ENST00000551920 KMT2CQ8NEZ4 4911 aaKnown RBP11.76□□□□□ -0.53
GCN1-209ENST00000551920 MAP1LC3B2A6NCE7 125 aa11.76□□□□□ -0.53
GCN1-209ENST00000551920 PGPA6NDG6 321 aa11.76□□□□□ -0.53
GCN1-209ENST00000551920 DIRC3C9JPN6 131 aa11.76□□□□□ -0.53
GCN1-209ENST00000551920 J3KRW8 73 aa11.76□□□□□ -0.53
GCN1-209ENST00000551920 TPT1P13693 172 aaKnown RBP11.76□□□□□ -0.53
GCN1-209ENST00000551920 GNG5P63218 68 aa11.76□□□□□ -0.53
GCN1-209ENST00000551920 PRR9Q5T870 116 aa11.76□□□□□ -0.53
GCN1-209ENST00000551920 MAP1LC3BQ9GZQ8 125 aa11.76□□□□□ -0.53
GCN1-209ENST00000551920 DYNC2H1Q8NCM8 4307 aaKnown RBP11.75□□□□□ -0.53
GCN1-209ENST00000551920 KLLNB2CW77 178 aa11.75□□□□□ -0.53
GCN1-209ENST00000551920 LEPP41159 167 aa11.75□□□□□ -0.53
GCN1-209ENST00000551920 CSN1S1P47710 185 aa11.75□□□□□ -0.53
GCN1-209ENST00000551920 NANOS2P60321 138 aaKnown RBP11.75□□□□□ -0.53
GCN1-209ENST00000551920 PMS2P11Q13670 270 aa11.75□□□□□ -0.53
GCN1-209ENST00000551920 ZFP69Q49AA0 526 aa11.75□□□□□ -0.53
GCN1-209ENST00000551920 IQCF2Q8IXL9 164 aa11.75□□□□□ -0.53
GCN1-209ENST00000551920 ZFAND2AQ8N6M9 145 aa11.75□□□□□ -0.53
GCN1-209ENST00000551920 LINC00477Q96M19 166 aa11.75□□□□□ -0.53
GCN1-209ENST00000551920 TMEM208Q9BTX3 173 aa11.75□□□□□ -0.53
GCN1-209ENST00000551920 TMEM167BQ9NRX6 74 aa11.75□□□□□ -0.53
GCN1-209ENST00000551920 RPH3ALQ9UNE2 315 aa11.75□□□□□ -0.53
GCN1-209ENST00000551920 YTHDF2Q9Y5A9 579 aaKnown RBP11.75□□□□□ -0.53
GCN1-209ENST00000551920 TENM2Q9NT68 2774 aa11.74□□□□□ -0.53
GCN1-209ENST00000551920 RBAKDNA6NC62 111 aa11.74□□□□□ -0.53
GCN1-209ENST00000551920 SMIM9A6NGZ8 99 aa11.74□□□□□ -0.53
GCN1-209ENST00000551920 ZNF705GA8MUZ8 300 aaPredicted RBP11.74□□□□□ -0.53
GCN1-209ENST00000551920 HBE1P02100 147 aa11.74□□□□□ -0.53
GCN1-209ENST00000551920 CRISP2P16562 243 aa11.74□□□□□ -0.53
GCN1-209ENST00000551920 TSPOP30536 169 aa11.74□□□□□ -0.53
GCN1-209ENST00000551920 TMEM78Q5T7P6 136 aa11.74□□□□□ -0.53
GCN1-209ENST00000551920 FAM213BQ8TBF2 198 aa11.74□□□□□ -0.53
GCN1-209ENST00000551920 ZNF492Q9P255 531 aa11.74□□□□□ -0.53
GCN1-209ENST00000551920 TRAV8-1A0A0A6YYK1 113 aa11.73□□□□□ -0.53
GCN1-209ENST00000551920 LOC102723971A0A1B0GUV8 181 aa11.73□□□□□ -0.53
GCN1-209ENST00000551920 UMAD1C9J7I0 102 aa11.73□□□□□ -0.53
GCN1-209ENST00000551920 SLC25A5P05141 298 aaKnown RBP11.73□□□□□ -0.53
GCN1-209ENST00000551920 ZNF138P52744 262 aa11.73□□□□□ -0.53
GCN1-209ENST00000551920 NKX2-5P52952 324 aaPredicted RBP11.73□□□□□ -0.53
GCN1-209ENST00000551920 EIF5AP63241 154 aaKnown RBP11.73□□□□□ -0.53
GCN1-209ENST00000551920 BTN1A1Q13410 526 aa11.73□□□□□ -0.53
GCN1-209ENST00000551920 GOLT1AQ6ZVE7 132 aa11.73□□□□□ -0.53
GCN1-209ENST00000551920 C11orf45Q8TAV5 145 aa11.73□□□□□ -0.53
GCN1-209ENST00000551920 RXFP4Q8TDU9 374 aa11.73□□□□□ -0.53
GCN1-209ENST00000551920 TRAV12-3A0A0B4J271 114 aa11.72□□□□□ -0.53
GCN1-209ENST00000551920 PLAC8L1A1L4L8 177 aa11.72□□□□□ -0.53
GCN1-209ENST00000551920 AZU1P20160 251 aa11.72□□□□□ -0.53
GCN1-209ENST00000551920 EMP1P54849 157 aa11.72□□□□□ -0.53
GCN1-209ENST00000551920 UBE2G2P60604 165 aa11.72□□□□□ -0.53
GCN1-209ENST00000551920 RRN3P1Q2M238 152 aa11.72□□□□□ -0.53
GCN1-209ENST00000551920 FAM74A1Q5RGS3 127 aa11.72□□□□□ -0.53
GCN1-209ENST00000551920 Q6ZQT7 251 aa11.72□□□□□ -0.53
GCN1-209ENST00000551920 TMEM256Q8N2U0 113 aa11.72□□□□□ -0.53
GCN1-209ENST00000551920 C5orf17Q8NAS9 161 aa11.72□□□□□ -0.53
GCN1-209ENST00000551920 CMTM2Q8TAZ6 248 aa11.72□□□□□ -0.53
GCN1-209ENST00000551920 C7orf71A4D174 169 aa11.71□□□□□ -0.53
GCN1-209ENST00000551920 CXorf65A6NEN9 183 aa11.71□□□□□ -0.53
GCN1-209ENST00000551920 SUMO1P63165 101 aaKnown RBP11.71□□□□□ -0.53
GCN1-209ENST00000551920 ZNF767PQ75MW2 155 aa11.71□□□□□ -0.53
GCN1-209ENST00000551920 SLC51BQ86UW2 128 aa11.71□□□□□ -0.53
GCN1-209ENST00000551920 ARL6IP6Q8N6S5 226 aa11.71□□□□□ -0.53
GCN1-209ENST00000551920 LINC01587Q99440 93 aa11.71□□□□□ -0.53
GCN1-209ENST00000551920 C20orf144Q9BQM9 153 aa11.71□□□□□ -0.53
GCN1-209ENST00000551920 A0A1B0GV50 99 aa11.7□□□□□ -0.54
GCN1-209ENST00000551920 A0A1W2PRE2 83 aa11.7□□□□□ -0.54
GCN1-209ENST00000551920 FAM74A7A6NL05 159 aa11.7□□□□□ -0.54
GCN1-209ENST00000551920 H7BYZ3 331 aa11.7□□□□□ -0.54
GCN1-209ENST00000551920 ZNF324O75467 553 aaPredicted RBP11.7□□□□□ -0.54
GCN1-209ENST00000551920 TCRAP04437 139 aa11.7□□□□□ -0.54
GCN1-209ENST00000551920 TAS2R60P59551 318 aa11.7□□□□□ -0.54
GCN1-209ENST00000551920 DPPA3Q6W0C5 159 aa11.7□□□□□ -0.54
GCN1-209ENST00000551920 SFT2D1Q8WV19 159 aa11.7□□□□□ -0.54
GCN1-209ENST00000551920 MBD3L1Q8WWY6 194 aa11.7□□□□□ -0.54
GCN1-209ENST00000551920 TVP23CQ96ET8 276 aa11.7□□□□□ -0.54
GCN1-209ENST00000551920 TRBV7-9A0A0J9YWB2 115 aa11.69□□□□□ -0.54
GCN1-209ENST00000551920 TMEM189A5PLL7 270 aa11.69□□□□□ -0.54
GCN1-209ENST00000551920 IGLV2-11P01706 119 aa11.69□□□□□ -0.54
GCN1-209ENST00000551920 NMBP08949 121 aa11.69□□□□□ -0.54
GCN1-209ENST00000551920 HTN1P15515 57 aa11.69□□□□□ -0.54
GCN1-209ENST00000551920 RNASE4P34096 147 aaKnown RBP11.69□□□□□ -0.54
GCN1-209ENST00000551920 C12orf74Q32Q52 190 aa11.69□□□□□ -0.54
GCN1-209ENST00000551920 Q6ZTC4 211 aa11.69□□□□□ -0.54
GCN1-209ENST00000551920 RNASE8Q8TDE3 154 aaKnown RBP11.69□□□□□ -0.54
GCN1-209ENST00000551920 PHLDA1Q8WV24 401 aaPredicted RBP11.69□□□□□ -0.54
GCN1-209ENST00000551920 SGK494Q96LW2 274 aa11.69□□□□□ -0.54
GCN1-209ENST00000551920 DKK2Q9UBU2 259 aa11.69□□□□□ -0.54
GCN1-209ENST00000551920 PLECQ15149 4684 aaKnown RBP11.68□□□□□ -0.54
GCN1-209ENST00000551920 GPX1P07203 203 aa11.68□□□□□ -0.54
GCN1-209ENST00000551920 FAM222AQ5U5X8 452 aa11.68□□□□□ -0.54
GCN1-209ENST00000551920 EPDR1Q9UM22 224 aa11.68□□□□□ -0.54
GCN1-209ENST00000551920 BOLA1Q9Y3E2 137 aa11.68□□□□□ -0.54
GCN1-209ENST00000551920 SULT1A2P50226 295 aa11.67□□□□□ -0.54
GCN1-209ENST00000551920 CEMP1Q6PRD7 247 aaPredicted RBP11.67□□□□□ -0.54
GCN1-209ENST00000551920 CCDC28AQ8IWP9 274 aa11.67□□□□□ -0.54
GCN1-209ENST00000551920 CYB561D1Q8N8Q1 229 aa11.67□□□□□ -0.54
GCN1-209ENST00000551920 NIPSNAP3BQ9BS92 247 aa11.67□□□□□ -0.54
GCN1-209ENST00000551920 ATG101Q9BSB4 218 aa11.67□□□□□ -0.54
GCN1-209ENST00000551920 LENEPQ9Y5L5 61 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms