RNA–Protein interactions for RNA: ENST00000551912.1

DDX54-209, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-209ENST00000551912 SLC25A5P05141 298 aaKnown RBP13.54□□□□□ -0.24
DDX54-209ENST00000551912 LEPP41159 167 aa13.54□□□□□ -0.24
DDX54-209ENST00000551912 ZNF705AQ6ZN79 300 aaPredicted RBP13.54□□□□□ -0.24
DDX54-209ENST00000551912 VGLL1Q99990 258 aa13.54□□□□□ -0.24
DDX54-209ENST00000551912 RPH3ALQ9UNE2 315 aa13.54□□□□□ -0.24
DDX54-209ENST00000551912 X6R8D5 127 aa13.54□□□□□ -0.24
DDX54-209ENST00000551912 IGHV3OR16-12A0A075B7B8 117 aa13.53□□□□□ -0.24
DDX54-209ENST00000551912 A0A0J9YWU9 116 aa13.53□□□□□ -0.24
DDX54-209ENST00000551912 H2AFB1P0C5Y9 115 aa13.53□□□□□ -0.24
DDX54-209ENST00000551912 MIFP14174 115 aa13.53□□□□□ -0.24
DDX54-209ENST00000551912 SULT1A2P50226 295 aa13.53□□□□□ -0.24
DDX54-209ENST00000551912 UBE2G2P60604 165 aa13.53□□□□□ -0.24
DDX54-209ENST00000551912 SUMO1P63165 101 aaKnown RBP13.53□□□□□ -0.24
DDX54-209ENST00000551912 C5orf17Q8NAS9 161 aa13.53□□□□□ -0.24
DDX54-209ENST00000551912 GGTLC3B5MD39 225 aa13.52□□□□□ -0.25
DDX54-209ENST00000551912 C1orf158Q8N1D5 194 aa13.52□□□□□ -0.25
DDX54-209ENST00000551912 TMEM208Q9BTX3 173 aa13.52□□□□□ -0.25
DDX54-209ENST00000551912 BOLA1Q9Y3E2 137 aa13.52□□□□□ -0.25
DDX54-209ENST00000551912 A0A1B0GV50 99 aa13.51□□□□□ -0.25
DDX54-209ENST00000551912 ZNF138P52744 262 aa13.51□□□□□ -0.25
DDX54-209ENST00000551912 GNG5P63218 68 aa13.51□□□□□ -0.25
DDX54-209ENST00000551912 GOLT1AQ6ZVE7 132 aa13.51□□□□□ -0.25
DDX54-209ENST00000551912 Q8NAQ8 132 aa13.51□□□□□ -0.25
DDX54-209ENST00000551912 FAM19A4Q96LR4 140 aa13.51□□□□□ -0.25
DDX54-209ENST00000551912 NEU1Q99519 415 aa13.51□□□□□ -0.25
DDX54-209ENST00000551912 NKX6-2Q9C056 277 aaPredicted RBP13.51□□□□□ -0.25
DDX54-209ENST00000551912 ZNF492Q9P255 531 aa13.51□□□□□ -0.25
DDX54-209ENST00000551912 YTHDF2Q9Y5A9 579 aaKnown RBP13.51□□□□□ -0.25
DDX54-209ENST00000551912 IGHV4-28A0A0C4DH34 117 aa13.5□□□□□ -0.25
DDX54-209ENST00000551912 SERTM2A0A1B0GWG4 89 aa13.5□□□□□ -0.25
DDX54-209ENST00000551912 SMIM9A6NGZ8 99 aa13.5□□□□□ -0.25
DDX54-209ENST00000551912 FAM74A7A6NL05 159 aa13.5□□□□□ -0.25
DDX54-209ENST00000551912 J3KRW8 73 aa13.5□□□□□ -0.25
DDX54-209ENST00000551912 KIR3DS1Q14943 382 aa13.5□□□□□ -0.25
DDX54-209ENST00000551912 GFI1BQ5VTD9 330 aa13.5□□□□□ -0.25
DDX54-209ENST00000551912 C11orf68Q9H3H3 251 aaKnown RBP13.5□□□□□ -0.25
DDX54-209ENST00000551912 TCRAP04437 139 aa13.49□□□□□ -0.25
DDX54-209ENST00000551912 NMBP08949 121 aa13.49□□□□□ -0.25
DDX54-209ENST00000551912 CRISP2P16562 243 aa13.49□□□□□ -0.25
DDX54-209ENST00000551912 TMEM256Q8N2U0 113 aa13.49□□□□□ -0.25
DDX54-209ENST00000551912 Q8TAT8 98 aa13.49□□□□□ -0.25
DDX54-209ENST00000551912 C20orf144Q9BQM9 153 aa13.49□□□□□ -0.25
DDX54-209ENST00000551912 EPDR1Q9UM22 224 aa13.49□□□□□ -0.25
DDX54-209ENST00000551912 ARL2-SNX15V9GYD0 113 aa13.49□□□□□ -0.25
DDX54-209ENST00000551912 TRAV1-1A0A0B4J248 108 aa13.48□□□□□ -0.25
DDX54-209ENST00000551912 TRBV7-9A0A0J9YWB2 115 aa13.48□□□□□ -0.25
DDX54-209ENST00000551912 TEX46H3BTG2 121 aa13.48□□□□□ -0.25
DDX54-209ENST00000551912 K7EQM0 130 aa13.48□□□□□ -0.25
DDX54-209ENST00000551912 DEFB4AO15263 64 aa13.48□□□□□ -0.25
DDX54-209ENST00000551912 IFNA7P01567 189 aa13.48□□□□□ -0.25
DDX54-209ENST00000551912 HBE1P02100 147 aa13.48□□□□□ -0.25
DDX54-209ENST00000551912 RBMY1A1P0DJD3 496 aaKnown RBP13.48□□□□□ -0.25
DDX54-209ENST00000551912 RBMY1CP0DJD4 496 aa13.48□□□□□ -0.25
DDX54-209ENST00000551912 RBMY1FQ15415 496 aaKnown RBP13.48□□□□□ -0.25
DDX54-209ENST00000551912 ALKAL2Q6UX46 152 aa13.48□□□□□ -0.25
DDX54-209ENST00000551912 LINC01587Q99440 93 aa13.48□□□□□ -0.25
DDX54-209ENST00000551912 KLLNB2CW77 178 aa13.47□□□□□ -0.25
DDX54-209ENST00000551912 GPX1P07203 203 aa13.47□□□□□ -0.25
DDX54-209ENST00000551912 PPT1P50897 306 aa13.47□□□□□ -0.25
DDX54-209ENST00000551912 CST9LP1Q5W188 147 aa13.47□□□□□ -0.25
DDX54-209ENST00000551912 CYB561D1Q8N8Q1 229 aa13.47□□□□□ -0.25
DDX54-209ENST00000551912 ATG101Q9BSB4 218 aa13.47□□□□□ -0.25
DDX54-209ENST00000551912 LENEPQ9Y5L5 61 aa13.47□□□□□ -0.25
DDX54-209ENST00000551912 TRAV8-1A0A0A6YYK1 113 aa13.46□□□□□ -0.25
DDX54-209ENST00000551912 TRAV12-3A0A0B4J271 114 aa13.46□□□□□ -0.25
DDX54-209ENST00000551912 C7orf71A4D174 169 aa13.46□□□□□ -0.25
DDX54-209ENST00000551912 H7BYZ3 331 aa13.46□□□□□ -0.25
DDX54-209ENST00000551912 PAGE4O60829 102 aa13.46□□□□□ -0.25
DDX54-209ENST00000551912 RRN3P1Q2M238 152 aa13.46□□□□□ -0.25
DDX54-209ENST00000551912 ZFAND2AQ8N6M9 145 aa13.46□□□□□ -0.25
DDX54-209ENST00000551912 MUC7Q8TAX7 377 aa13.46□□□□□ -0.25
DDX54-209ENST00000551912 NIPSNAP3BQ9BS92 247 aa13.46□□□□□ -0.25
DDX54-209ENST00000551912 DNAH7Q8WXX0 4024 aa13.46□□□□□ -0.26
DDX54-209ENST00000551912 RNASE4P34096 147 aaKnown RBP13.45□□□□□ -0.26
DDX54-209ENST00000551912 TAS2R60P59551 318 aa13.45□□□□□ -0.26
DDX54-209ENST00000551912 BTN1A1Q13410 526 aa13.45□□□□□ -0.26
DDX54-209ENST00000551912 IL17DQ8TAD2 202 aa13.45□□□□□ -0.26
DDX54-209ENST00000551912 HIST1H2BAQ96A08 127 aa13.45□□□□□ -0.26
DDX54-209ENST00000551912 TCEAL7Q9BRU2 100 aa13.45□□□□□ -0.26
DDX54-209ENST00000551912 TMEM189A5PLL7 270 aa13.44□□□□□ -0.26
DDX54-209ENST00000551912 ZNF705GA8MUZ8 300 aaPredicted RBP13.44□□□□□ -0.26
DDX54-209ENST00000551912 PEX7O00628 323 aa13.44□□□□□ -0.26
DDX54-209ENST00000551912 CCL20P78556 96 aa13.44□□□□□ -0.26
DDX54-209ENST00000551912 CCDC28AQ8IWP9 274 aa13.44□□□□□ -0.26
DDX54-209ENST00000551912 SGK494Q96LW2 274 aa13.44□□□□□ -0.26
DDX54-209ENST00000551912 LOC102723971A0A1B0GUV8 181 aa13.43□□□□□ -0.26
DDX54-209ENST00000551912 FBLL1A6NHQ2 334 aaKnown RBP13.43□□□□□ -0.26
DDX54-209ENST00000551912 F6UZH7 168 aa13.43□□□□□ -0.26
DDX54-209ENST00000551912 HTN1P15515 57 aa13.43□□□□□ -0.26
DDX54-209ENST00000551912 ATP5G3P48201 142 aa13.43□□□□□ -0.26
DDX54-209ENST00000551912 PRR9Q5T870 116 aa13.43□□□□□ -0.26
DDX54-209ENST00000551912 TMEM75Q8N9X5 138 aa13.43□□□□□ -0.26
DDX54-209ENST00000551912 NDFIP1Q9BT67 221 aa13.43□□□□□ -0.26
DDX54-209ENST00000551912 MANBALQ9NQG1 85 aa13.43□□□□□ -0.26
DDX54-209ENST00000551912 GNG13Q9P2W3 67 aa13.43□□□□□ -0.26
DDX54-209ENST00000551912 PSG8Q9UQ74 426 aa13.43□□□□□ -0.26
DDX54-209ENST00000551912 ZNF324O75467 553 aaPredicted RBP13.42□□□□□ -0.26
DDX54-209ENST00000551912 IGLV2-11P01706 119 aa13.42□□□□□ -0.26
DDX54-209ENST00000551912 PRM2P04554 102 aa13.42□□□□□ -0.26
DDX54-209ENST00000551912 EMP1P54849 157 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 142.5 ms