RNA–Protein interactions for RNA: ENST00000551691.5

LIMA1-208, Transcript of LIM domain and actin binding 1, humanhuman

TSL 3

Gene LIMA1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-208ENST00000551691 YIPF7Q8N8F6 280 aa2.33□□□□□ -2.04
LIMA1-208ENST00000551691 Q8NAQ8 132 aa2.33□□□□□ -2.04
LIMA1-208ENST00000551691 OR9I1Q8NGQ6 314 aa2.33□□□□□ -2.04
LIMA1-208ENST00000551691 OR10X1Q8NGY0 326 aa2.33□□□□□ -2.04
LIMA1-208ENST00000551691 OR4K13Q8NH42 304 aa2.33□□□□□ -2.04
LIMA1-208ENST00000551691 OR51H1Q8NH63 302 aa2.33□□□□□ -2.04
LIMA1-208ENST00000551691 SLAMF6Q96DU3 332 aa2.33□□□□□ -2.04
LIMA1-208ENST00000551691 C20orf27Q9GZN8 174 aa2.33□□□□□ -2.04
LIMA1-208ENST00000551691 GABARAPL1Q9H0R8 117 aa2.33□□□□□ -2.04
LIMA1-208ENST00000551691 C11orf68Q9H3H3 251 aaKnown RBP2.33□□□□□ -2.04
LIMA1-208ENST00000551691 VSIRQ9H7M9 311 aa2.33□□□□□ -2.04
LIMA1-208ENST00000551691 HES4Q9HCC6 221 aa2.33□□□□□ -2.04
LIMA1-208ENST00000551691 TAS2R1Q9NYW7 299 aa2.33□□□□□ -2.04
LIMA1-208ENST00000551691 IGKV2-28A0A075B6P5 120 aa2.32□□□□□ -2.04
LIMA1-208ENST00000551691 TRGV10A0A0A0MS01 117 aa2.32□□□□□ -2.04
LIMA1-208ENST00000551691 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.32□□□□□ -2.04
LIMA1-208ENST00000551691 TRAV8-1A0A0A6YYK1 113 aa2.32□□□□□ -2.04
LIMA1-208ENST00000551691 IGHV3-21A0A0B4J1V1 117 aa2.32□□□□□ -2.04
LIMA1-208ENST00000551691 PRORSD1PA6NEY8 169 aa2.32□□□□□ -2.04
LIMA1-208ENST00000551691 NOS1APO75052 506 aaPredicted RBP2.32□□□□□ -2.04
LIMA1-208ENST00000551691 HAND1O96004 215 aa2.32□□□□□ -2.04
LIMA1-208ENST00000551691 IGKV2D-28P01615 120 aa2.32□□□□□ -2.04
LIMA1-208ENST00000551691 CBLN1P23435 193 aa2.32□□□□□ -2.04
LIMA1-208ENST00000551691 DDTP30046 118 aa2.32□□□□□ -2.04
LIMA1-208ENST00000551691 SULT1A1P50225 295 aa2.32□□□□□ -2.04
LIMA1-208ENST00000551691 FXYD6P3P58550 94 aa2.32□□□□□ -2.04
LIMA1-208ENST00000551691 CTAG1AP78358 180 aa2.32□□□□□ -2.04
LIMA1-208ENST00000551691 MMDQ15546 238 aa2.32□□□□□ -2.04
LIMA1-208ENST00000551691 LGALSLQ3ZCW2 172 aaPredicted RBP2.32□□□□□ -2.04
LIMA1-208ENST00000551691 SPATA31B1PQ5VZV4 182 aa2.32□□□□□ -2.04
LIMA1-208ENST00000551691 Q5W150 140 aa2.32□□□□□ -2.04
LIMA1-208ENST00000551691 ZFP82Q8N141 532 aa2.32□□□□□ -2.04
LIMA1-208ENST00000551691 C15orf53Q8NAA6 179 aa2.32□□□□□ -2.04
LIMA1-208ENST00000551691 OR8B12Q8NGG6 310 aa2.32□□□□□ -2.04
LIMA1-208ENST00000551691 OR5A2Q8NGI9 324 aa2.32□□□□□ -2.04
LIMA1-208ENST00000551691 ZNRF2Q8NHG8 242 aa2.32□□□□□ -2.04
LIMA1-208ENST00000551691 HAVCR2Q8TDQ0 301 aa2.32□□□□□ -2.04
LIMA1-208ENST00000551691 ABHD14BQ96IU4 210 aa2.32□□□□□ -2.04
LIMA1-208ENST00000551691 AMELYQ99218 206 aa2.32□□□□□ -2.04
LIMA1-208ENST00000551691 IGHV3-43A0A0B4J1X8 118 aa2.31□□□□□ -2.04
LIMA1-208ENST00000551691 DHRS12A0PJE2 317 aa2.31□□□□□ -2.04
LIMA1-208ENST00000551691 ODAMA1E959 279 aa2.31□□□□□ -2.04
LIMA1-208ENST00000551691 PPP5D1E7EU14 171 aa2.31□□□□□ -2.04
LIMA1-208ENST00000551691 TMEM250H0YL14 139 aa2.31□□□□□ -2.04
LIMA1-208ENST00000551691 HLA-DRB1P01911 266 aa2.31□□□□□ -2.04
LIMA1-208ENST00000551691 IGLV7-43P04211 117 aa2.31□□□□□ -2.04
LIMA1-208ENST00000551691 APELAP0DMC3 54 aa2.31□□□□□ -2.04
LIMA1-208ENST00000551691 OR13C7P0DN81 318 aa2.31□□□□□ -2.04
LIMA1-208ENST00000551691 CXCL3P19876 107 aa2.31□□□□□ -2.04
LIMA1-208ENST00000551691 CRABP1P29762 137 aa2.31□□□□□ -2.04
LIMA1-208ENST00000551691 ERP29P30040 261 aaKnown RBP2.31□□□□□ -2.04
LIMA1-208ENST00000551691 S100A5P33763 92 aa2.31□□□□□ -2.04
LIMA1-208ENST00000551691 TGFBR1P36897 503 aa2.31□□□□□ -2.04
LIMA1-208ENST00000551691 AKR1C2P52895 323 aa2.31□□□□□ -2.04
LIMA1-208ENST00000551691 KRTAP10-4P60372 401 aaPredicted RBP2.31□□□□□ -2.04
LIMA1-208ENST00000551691 NAA20P61599 178 aa2.31□□□□□ -2.04
LIMA1-208ENST00000551691 TSPAN31Q12999 210 aa2.31□□□□□ -2.04
LIMA1-208ENST00000551691 CCDC153Q494R4 210 aa2.31□□□□□ -2.04
LIMA1-208ENST00000551691 C1orf195Q5TG92 126 aa2.31□□□□□ -2.04
LIMA1-208ENST00000551691 EBLN2Q6P2I7 272 aa2.31□□□□□ -2.04
LIMA1-208ENST00000551691 SH2D6Q7Z4S9 175 aa2.31□□□□□ -2.04
LIMA1-208ENST00000551691 OR1P1Q8NH06 330 aa2.31□□□□□ -2.04
LIMA1-208ENST00000551691 RMI2Q96E14 147 aa2.31□□□□□ -2.04
LIMA1-208ENST00000551691 ERMAPQ96PL5 475 aaPredicted RBP2.31□□□□□ -2.04
LIMA1-208ENST00000551691 SPIN2AQ99865 258 aa2.31□□□□□ -2.04
LIMA1-208ENST00000551691 SPIN2BQ9BPZ2 258 aa2.31□□□□□ -2.04
LIMA1-208ENST00000551691 SEC22CQ9BRL7 303 aa2.31□□□□□ -2.04
LIMA1-208ENST00000551691 GTSF1LQ9H1H1 148 aa2.31□□□□□ -2.04
LIMA1-208ENST00000551691 IDI2-AS1Q9NZ38 188 aa2.31□□□□□ -2.04
LIMA1-208ENST00000551691 AMMECR1Q9Y4X0 333 aaPredicted RBP2.31□□□□□ -2.04
LIMA1-208ENST00000551691 A0A087WUU8 490 aa2.3□□□□□ -2.04
LIMA1-208ENST00000551691 PQLC2LA1A4F0 135 aa2.3□□□□□ -2.04
LIMA1-208ENST00000551691 A6NED7 52 aa2.3□□□□□ -2.04
LIMA1-208ENST00000551691 OR5H14A6NHG9 310 aa2.3□□□□□ -2.04
LIMA1-208ENST00000551691 ZNF98A6NK75 572 aa2.3□□□□□ -2.04
LIMA1-208ENST00000551691 ISLRO14498 428 aa2.3□□□□□ -2.04
LIMA1-208ENST00000551691 OR2H2O95918 312 aa2.3□□□□□ -2.04
LIMA1-208ENST00000551691 PRH1P02810 166 aa2.3□□□□□ -2.04
LIMA1-208ENST00000551691 GYPBP06028 91 aa2.3□□□□□ -2.04
LIMA1-208ENST00000551691 HIST1H1EP10412 219 aaKnown RBP2.3□□□□□ -2.04
LIMA1-208ENST00000551691 HTN3P15516 51 aa2.3□□□□□ -2.04
LIMA1-208ENST00000551691 CXCL2P19875 107 aa2.3□□□□□ -2.04
LIMA1-208ENST00000551691 HSD11B1P28845 292 aa2.3□□□□□ -2.04
LIMA1-208ENST00000551691 CXCR4P61073 352 aa2.3□□□□□ -2.04
LIMA1-208ENST00000551691 CAV1Q03135 178 aa2.3□□□□□ -2.04
LIMA1-208ENST00000551691 CDK5R1Q15078 307 aa2.3□□□□□ -2.04
LIMA1-208ENST00000551691 OR10K2Q6IF99 312 aa2.3□□□□□ -2.04
LIMA1-208ENST00000551691 Q6P435 159 aa2.3□□□□□ -2.04
LIMA1-208ENST00000551691 SLC25A34Q6PIV7 304 aa2.3□□□□□ -2.04
LIMA1-208ENST00000551691 NEGR1Q7Z3B1 354 aa2.3□□□□□ -2.04
LIMA1-208ENST00000551691 SPANXA2-OT1Q8N9U9 137 aa2.3□□□□□ -2.04
LIMA1-208ENST00000551691 Q8WTZ3 238 aa2.3□□□□□ -2.04
LIMA1-208ENST00000551691 ACY3Q96HD9 319 aa2.3□□□□□ -2.04
LIMA1-208ENST00000551691 CYYR1Q96J86 154 aa2.3□□□□□ -2.04
LIMA1-208ENST00000551691 SHANK2-AS3Q9BTD1 123 aa2.3□□□□□ -2.04
LIMA1-208ENST00000551691 PECRQ9BY49 303 aa2.3□□□□□ -2.04
LIMA1-208ENST00000551691 MED28Q9H204 178 aa2.3□□□□□ -2.04
LIMA1-208ENST00000551691 ERGIC3Q9Y282 383 aa2.3□□□□□ -2.04
LIMA1-208ENST00000551691 ARL2BPQ9Y2Y0 163 aa2.3□□□□□ -2.04
LIMA1-208ENST00000551691 UTP11Q9Y3A2 253 aaKnown RBP2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms