RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 AGPAT4-IT1Q9H0P7 198 aa14.9□□□□□ -0.02
SMARCC2-210ENST00000550519 PRELID1Q9Y255 219 aa14.9□□□□□ -0.02
SMARCC2-210ENST00000550519 C5orf51A6NDU8 294 aa14.89□□□□□ -0.03
SMARCC2-210ENST00000550519 HIST1H1EP10412 219 aaKnown RBP14.89□□□□□ -0.03
SMARCC2-210ENST00000550519 S100A11P31949 105 aa14.89□□□□□ -0.03
SMARCC2-210ENST00000550519 SULT1A1P50225 295 aa14.89□□□□□ -0.03
SMARCC2-210ENST00000550519 EIF4E3Q8N5X7 224 aaKnown RBP14.89□□□□□ -0.03
SMARCC2-210ENST00000550519 FUT9Q9Y231 359 aa14.89□□□□□ -0.03
SMARCC2-210ENST00000550519 TRGV1A0A0A0MS02 117 aa14.88□□□□□ -0.03
SMARCC2-210ENST00000550519 UBE2L5PA0A1B0GUS4 154 aa14.88□□□□□ -0.03
SMARCC2-210ENST00000550519 SPINK4O60575 86 aa14.88□□□□□ -0.03
SMARCC2-210ENST00000550519 BAXQ07812 192 aa14.88□□□□□ -0.03
SMARCC2-210ENST00000550519 BTN1A1Q13410 526 aa14.88□□□□□ -0.03
SMARCC2-210ENST00000550519 PDE6HQ13956 83 aa14.88□□□□□ -0.03
SMARCC2-210ENST00000550519 C2orf50Q96LR7 162 aa14.88□□□□□ -0.03
SMARCC2-210ENST00000550519 LYRM2Q9NU23 88 aaPredicted RBP14.88□□□□□ -0.03
SMARCC2-210ENST00000550519 KLF12Q9Y4X4 402 aa14.88□□□□□ -0.03
SMARCC2-210ENST00000550519 LYRM1O43325 122 aa14.87□□□□□ -0.03
SMARCC2-210ENST00000550519 TCRBP04435 133 aa14.87□□□□□ -0.03
SMARCC2-210ENST00000550519 CRISP2P16562 243 aa14.87□□□□□ -0.03
SMARCC2-210ENST00000550519 PVALBP20472 110 aaPredicted RBP14.87□□□□□ -0.03
SMARCC2-210ENST00000550519 TCL1AP56279 114 aa14.87□□□□□ -0.03
SMARCC2-210ENST00000550519 IL15RAQ13261 267 aa14.87□□□□□ -0.03
SMARCC2-210ENST00000550519 TMEM252Q8N6L7 170 aa14.87□□□□□ -0.03
SMARCC2-210ENST00000550519 SEC22CQ9BRL7 303 aa14.87□□□□□ -0.03
SMARCC2-210ENST00000550519 TIMM9Q9Y5J7 89 aa14.87□□□□□ -0.03
SMARCC2-210ENST00000550519 IGSF23A1L1A6 192 aa14.86□□□□□ -0.03
SMARCC2-210ENST00000550519 SIVA1O15304 175 aa14.86□□□□□ -0.03
SMARCC2-210ENST00000550519 NMBP08949 121 aa14.86□□□□□ -0.03
SMARCC2-210ENST00000550519 PYYP10082 97 aa14.86□□□□□ -0.03
SMARCC2-210ENST00000550519 RNASE4P34096 147 aaKnown RBP14.86□□□□□ -0.03
SMARCC2-210ENST00000550519 IBA57Q5T440 356 aaKnown RBP14.86□□□□□ -0.03
SMARCC2-210ENST00000550519 C9orf47Q6ZRZ4 202 aa14.86□□□□□ -0.03
SMARCC2-210ENST00000550519 EXOC3-AS1Q8N2X6 119 aa14.86□□□□□ -0.03
SMARCC2-210ENST00000550519 TRAV6A0A075B6T7 132 aa14.85□□□□□ -0.03
SMARCC2-210ENST00000550519 MPDU1O75352 247 aa14.85□□□□□ -0.03
SMARCC2-210ENST00000550519 HBG1P69891 147 aa14.85□□□□□ -0.03
SMARCC2-210ENST00000550519 HBG2P69892 147 aa14.85□□□□□ -0.03
SMARCC2-210ENST00000550519 ZFAND2AQ8N6M9 145 aa14.85□□□□□ -0.03
SMARCC2-210ENST00000550519 ST6GAL2Q96JF0 529 aa14.85□□□□□ -0.03
SMARCC2-210ENST00000550519 PAX4O43316 350 aa14.84□□□□□ -0.03
SMARCC2-210ENST00000550519 GPX1P07203 203 aa14.84□□□□□ -0.03
SMARCC2-210ENST00000550519 FGF7P21781 194 aa14.84□□□□□ -0.03
SMARCC2-210ENST00000550519 S100A10P60903 97 aa14.84□□□□□ -0.03
SMARCC2-210ENST00000550519 RAB32Q13637 225 aa14.84□□□□□ -0.03
SMARCC2-210ENST00000550519 ATP6V1FQ16864 119 aa14.84□□□□□ -0.03
SMARCC2-210ENST00000550519 GCSAMLQ5JQS6 135 aa14.84□□□□□ -0.03
SMARCC2-210ENST00000550519 STX12Q86Y82 276 aa14.84□□□□□ -0.03
SMARCC2-210ENST00000550519 BLNKQ8WV28 456 aa14.84□□□□□ -0.03
SMARCC2-210ENST00000550519 NUDT15Q9NV35 164 aa14.84□□□□□ -0.03
SMARCC2-210ENST00000550519 ICOSQ9Y6W8 199 aa14.84□□□□□ -0.03
SMARCC2-210ENST00000550519 PRR9Q5T870 116 aa14.83□□□□□ -0.04
SMARCC2-210ENST00000550519 AAMDCQ9H7C9 122 aa14.83□□□□□ -0.04
SMARCC2-210ENST00000550519 TP53TG3Q9ULZ0 132 aa14.83□□□□□ -0.04
SMARCC2-210ENST00000550519 IGKV2-40A0A087WW87 121 aaPredicted RBP14.82□□□□□ -0.04
SMARCC2-210ENST00000550519 NXPH4O95158 308 aa14.82□□□□□ -0.04
SMARCC2-210ENST00000550519 IGKV2D-40P01614 121 aaPredicted RBP14.82□□□□□ -0.04
SMARCC2-210ENST00000550519 ICAM4Q14773 271 aa14.82□□□□□ -0.04
SMARCC2-210ENST00000550519 Q6ZQT7 251 aa14.82□□□□□ -0.04
SMARCC2-210ENST00000550519 VGLL1Q99990 258 aa14.82□□□□□ -0.04
SMARCC2-210ENST00000550519 SLC25A2Q9BXI2 301 aa14.82□□□□□ -0.04
SMARCC2-210ENST00000550519 NPCDR1Q9BY65 106 aa14.82□□□□□ -0.04
SMARCC2-210ENST00000550519 PGPEP1Q9NXJ5 209 aa14.82□□□□□ -0.04
SMARCC2-210ENST00000550519 PRO0255Q9UI72 69 aa14.82□□□□□ -0.04
SMARCC2-210ENST00000550519 IGHV1OR15-1A0A075B7D0 117 aa14.81□□□□□ -0.04
SMARCC2-210ENST00000550519 RGS13O14921 159 aa14.81□□□□□ -0.04
SMARCC2-210ENST00000550519 TMEM78Q5T7P6 136 aa14.81□□□□□ -0.04
SMARCC2-210ENST00000550519 FAM167A-AS1Q96KT0 104 aa14.81□□□□□ -0.04
SMARCC2-210ENST00000550519 MRPL16Q9NX20 251 aaKnown RBP14.81□□□□□ -0.04
SMARCC2-210ENST00000550519 ZNF492Q9P255 531 aa14.81□□□□□ -0.04
SMARCC2-210ENST00000550519 IGHV3-53P01767 116 aa14.8□□□□□ -0.04
SMARCC2-210ENST00000550519 CRYBA4P53673 196 aa14.8□□□□□ -0.04
SMARCC2-210ENST00000550519 SLAQ13239 276 aa14.8□□□□□ -0.04
SMARCC2-210ENST00000550519 FAM122CQ6P4D5 195 aa14.8□□□□□ -0.04
SMARCC2-210ENST00000550519 GPN1Q9HCN4 374 aaPredicted RBP14.8□□□□□ -0.04
SMARCC2-210ENST00000550519 NBEAP1P0C6P0 100 aa14.79□□□□□ -0.04
SMARCC2-210ENST00000550519 FHL2Q14192 279 aa14.79□□□□□ -0.04
SMARCC2-210ENST00000550519 LYPD5Q6UWN5 251 aa14.79□□□□□ -0.04
SMARCC2-210ENST00000550519 HHLA3Q9XRX5 114 aa14.79□□□□□ -0.04
SMARCC2-210ENST00000550519 TNFRSF18Q9Y5U5 241 aa14.79□□□□□ -0.04
SMARCC2-210ENST00000550519 TRBV7-9A0A0J9YWB2 115 aa14.78□□□□□ -0.04
SMARCC2-210ENST00000550519 H2AFB2P0C5Z0 115 aa14.78□□□□□ -0.04
SMARCC2-210ENST00000550519 MRPL23Q16540 153 aaKnown RBP14.78□□□□□ -0.04
SMARCC2-210ENST00000550519 MIR17HGQ75NE6 70 aa14.78□□□□□ -0.04
SMARCC2-210ENST00000550519 ARPC5LQ9BPX5 153 aa14.78□□□□□ -0.04
SMARCC2-210ENST00000550519 EREGO14944 169 aa14.77□□□□□ -0.05
SMARCC2-210ENST00000550519 ERVFC1-1P60608 527 aa14.77□□□□□ -0.05
SMARCC2-210ENST00000550519 CDPF1Q6NVV7 123 aa14.77□□□□□ -0.05
SMARCC2-210ENST00000550519 C8orf49Q96NF6 230 aa14.77□□□□□ -0.05
SMARCC2-210ENST00000550519 OR51M1Q9H341 326 aa14.77□□□□□ -0.05
SMARCC2-210ENST00000550519 EPM2AB3EWF7 344 aa14.76□□□□□ -0.05
SMARCC2-210ENST00000550519 PRAF2O60831 178 aa14.76□□□□□ -0.05
SMARCC2-210ENST00000550519 FUSP35637 526 aaKnown RBP eCLIP14.76□□□□□ -0.05
SMARCC2-210ENST00000550519 ZNF138P52744 262 aa14.76□□□□□ -0.05
SMARCC2-210ENST00000550519 NHLH2Q02577 135 aa14.76□□□□□ -0.05
SMARCC2-210ENST00000550519 NEGR1Q7Z3B1 354 aa14.76□□□□□ -0.05
SMARCC2-210ENST00000550519 NFE4Q86UQ8 179 aa14.76□□□□□ -0.05
SMARCC2-210ENST00000550519 THAP6Q8TBB0 222 aa14.76□□□□□ -0.05
SMARCC2-210ENST00000550519 MRPL32Q9BYC8 188 aaKnown RBP14.76□□□□□ -0.05
SMARCC2-210ENST00000550519 XGP55808 180 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 2131.4 ms