RNA–Protein interactions for RNA: ENST00000550483.5

CACNB3-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-217ENST00000550483 GATCO43716 136 aaKnown RBP9.54□□□□□ -0.88
CACNB3-217ENST00000550483 TYMSP04818 313 aa9.54□□□□□ -0.88
CACNB3-217ENST00000550483 CBLN1P23435 193 aa9.54□□□□□ -0.88
CACNB3-217ENST00000550483 PROK1P58294 105 aa9.54□□□□□ -0.88
CACNB3-217ENST00000550483 RPL11P62913 178 aaKnown RBP9.54□□□□□ -0.88
CACNB3-217ENST00000550483 KRTAP24-1Q3LI83 254 aa9.54□□□□□ -0.88
CACNB3-217ENST00000550483 GBGT1Q8N5D6 347 aa9.54□□□□□ -0.88
CACNB3-217ENST00000550483 OR9G4Q8NGQ1 327 aa9.54□□□□□ -0.88
CACNB3-217ENST00000550483 FAM210BQ96KR6 192 aa9.54□□□□□ -0.88
CACNB3-217ENST00000550483 AURKAIP1Q9NWT8 199 aaPredicted RBP9.54□□□□□ -0.88
CACNB3-217ENST00000550483 V9GYV3 84 aa9.54□□□□□ -0.88
CACNB3-217ENST00000550483 SVEP1Q4LDE5 3571 aa9.54□□□□□ -0.88
CACNB3-217ENST00000550483 P01737 135 aa9.53□□□□□ -0.88
CACNB3-217ENST00000550483 FAM3BP58499 235 aaPredicted RBP9.53□□□□□ -0.88
CACNB3-217ENST00000550483 SNRPD3P62318 126 aaKnown RBP9.53□□□□□ -0.88
CACNB3-217ENST00000550483 OR5I1Q13606 314 aa9.53□□□□□ -0.88
CACNB3-217ENST00000550483 TMEM78Q5T7P6 136 aa9.53□□□□□ -0.88
CACNB3-217ENST00000550483 C9orf47Q6ZRZ4 202 aa9.53□□□□□ -0.88
CACNB3-217ENST00000550483 OR10J6PQ8NGY7 276 aa9.53□□□□□ -0.88
CACNB3-217ENST00000550483 LINC00477Q96M19 166 aa9.53□□□□□ -0.88
CACNB3-217ENST00000550483 GFRA4Q9GZZ7 299 aa9.53□□□□□ -0.88
CACNB3-217ENST00000550483 SAV1Q9H4B6 383 aaPredicted RBP9.53□□□□□ -0.88
CACNB3-217ENST00000550483 SIGLEC8Q9NYZ4 499 aa9.53□□□□□ -0.88
CACNB3-217ENST00000550483 URGCP-MRPS24S4R325 110 aa9.53□□□□□ -0.88
CACNB3-217ENST00000550483 XKRY2A2RUG3 117 aa9.52□□□□□ -0.89
CACNB3-217ENST00000550483 C19orf71A6NCJ1 209 aa9.52□□□□□ -0.89
CACNB3-217ENST00000550483 A8MWL6 223 aa9.52□□□□□ -0.89
CACNB3-217ENST00000550483 C1orf196B1AJZ1 125 aa9.52□□□□□ -0.89
CACNB3-217ENST00000550483 NPIPB6E9PJ23 425 aa9.52□□□□□ -0.89
CACNB3-217ENST00000550483 RAB5BP61020 215 aa9.52□□□□□ -0.89
CACNB3-217ENST00000550483 SMUG1Q53HV7 270 aa9.52□□□□□ -0.89
CACNB3-217ENST00000550483 Q6AWC8 147 aa9.52□□□□□ -0.89
CACNB3-217ENST00000550483 ZNF738Q8NE65 137 aa9.52□□□□□ -0.89
CACNB3-217ENST00000550483 PRR25Q96S07 402 aa9.52□□□□□ -0.89
CACNB3-217ENST00000550483 RPP21Q9H633 154 aaKnown RBP9.52□□□□□ -0.89
CACNB3-217ENST00000550483 SRD5A3Q9H8P0 318 aa9.52□□□□□ -0.89
CACNB3-217ENST00000550483 IGKV2-40A0A087WW87 121 aaPredicted RBP9.51□□□□□ -0.89
CACNB3-217ENST00000550483 TRAV8-1A0A0A6YYK1 113 aa9.51□□□□□ -0.89
CACNB3-217ENST00000550483 TRAV25A0A0B4J276 109 aa9.51□□□□□ -0.89
CACNB3-217ENST00000550483 A0A1W2PPQ1 181 aa9.51□□□□□ -0.89
CACNB3-217ENST00000550483 SMIM27A0A1W2PRY6 76 aa9.51□□□□□ -0.89
CACNB3-217ENST00000550483 CCL24O00175 119 aa9.51□□□□□ -0.89
CACNB3-217ENST00000550483 IGKV2D-40P01614 121 aaPredicted RBP9.51□□□□□ -0.89
CACNB3-217ENST00000550483 CD28P10747 220 aa9.51□□□□□ -0.89
CACNB3-217ENST00000550483 ZNF138P52744 262 aa9.51□□□□□ -0.89
CACNB3-217ENST00000550483 SLURP1P55000 103 aa9.51□□□□□ -0.89
CACNB3-217ENST00000550483 RPS20P60866 119 aaKnown RBP9.51□□□□□ -0.89
CACNB3-217ENST00000550483 FAM162BQ5T6X4 162 aa9.51□□□□□ -0.89
CACNB3-217ENST00000550483 PRR27Q6MZM9 219 aa9.51□□□□□ -0.89
CACNB3-217ENST00000550483 RASL11AQ6T310 242 aa9.51□□□□□ -0.89
CACNB3-217ENST00000550483 NDUFA11Q86Y39 141 aa9.51□□□□□ -0.89
CACNB3-217ENST00000550483 NUDT10Q8NFP7 164 aa9.51□□□□□ -0.89
CACNB3-217ENST00000550483 TSKUQ8WUA8 353 aa9.51□□□□□ -0.89
CACNB3-217ENST00000550483 NUDT11Q96G61 164 aa9.51□□□□□ -0.89
CACNB3-217ENST00000550483 ASCL2Q99929 193 aa9.51□□□□□ -0.89
CACNB3-217ENST00000550483 RNASE7Q9H1E1 156 aaKnown RBP9.51□□□□□ -0.89
CACNB3-217ENST00000550483 NAT8BQ9UHF3 227 aa9.51□□□□□ -0.89
CACNB3-217ENST00000550483 TGIF2-C20orf24A0A0A6YYL0 155 aa9.5□□□□□ -0.89
CACNB3-217ENST00000550483 RPS10P46783 165 aaKnown RBP9.5□□□□□ -0.89
CACNB3-217ENST00000550483 RNF182Q8N6D2 247 aa9.5□□□□□ -0.89
CACNB3-217ENST00000550483 NHLRC2Q8NBF2 726 aa9.5□□□□□ -0.89
CACNB3-217ENST00000550483 DYNLRB2Q8TF09 96 aa9.5□□□□□ -0.89
CACNB3-217ENST00000550483 DCANP1Q8TF63 244 aa9.5□□□□□ -0.89
CACNB3-217ENST00000550483 CITED2Q99967 270 aaPredicted RBP9.5□□□□□ -0.89
CACNB3-217ENST00000550483 TMA7Q9Y2S6 64 aaKnown RBP9.5□□□□□ -0.89
CACNB3-217ENST00000550483 K7EQG2 157 aa9.49□□□□□ -0.89
CACNB3-217ENST00000550483 MT-ND6P03923 174 aa9.49□□□□□ -0.89
CACNB3-217ENST00000550483 CXCL1P09341 107 aa9.49□□□□□ -0.89
CACNB3-217ENST00000550483 DEFB136Q30KP8 78 aa9.49□□□□□ -0.89
CACNB3-217ENST00000550483 WDR73Q6P4I2 378 aa9.49□□□□□ -0.89
CACNB3-217ENST00000550483 ATP5L2Q7Z4Y8 100 aa9.49□□□□□ -0.89
CACNB3-217ENST00000550483 RAX2Q96IS3 184 aa9.49□□□□□ -0.89
CACNB3-217ENST00000550483 SGK494Q96LW2 274 aa9.49□□□□□ -0.89
CACNB3-217ENST00000550483 ODF3Q96PU9 254 aa9.49□□□□□ -0.89
CACNB3-217ENST00000550483 MS4A6AQ9H2W1 248 aa9.49□□□□□ -0.89
CACNB3-217ENST00000550483 IZUMO1RA6ND01 250 aa9.48□□□□□ -0.89
CACNB3-217ENST00000550483 FABP5P3A8MUU1 101 aa9.48□□□□□ -0.89
CACNB3-217ENST00000550483 ZNF705FA8MVS1 300 aaPredicted RBP9.48□□□□□ -0.89
CACNB3-217ENST00000550483 HLA-DMBP28068 263 aa9.48□□□□□ -0.89
CACNB3-217ENST00000550483 HIST1H1AQ02539 215 aaPredicted RBP9.48□□□□□ -0.89
CACNB3-217ENST00000550483 IGFL4Q6B9Z1 124 aa9.48□□□□□ -0.89
CACNB3-217ENST00000550483 RBPMS2Q6ZRY4 209 aaKnown RBP9.48□□□□□ -0.89
CACNB3-217ENST00000550483 C18orf65Q6ZTR6 163 aa9.48□□□□□ -0.89
CACNB3-217ENST00000550483 OR8A1Q8NGG7 326 aa9.48□□□□□ -0.89
CACNB3-217ENST00000550483 OR2K2Q8NGT1 345 aa9.48□□□□□ -0.89
CACNB3-217ENST00000550483 DLX4Q92988 240 aaPredicted RBP9.48□□□□□ -0.89
CACNB3-217ENST00000550483 ZC2HC1AQ96GY0 325 aa9.48□□□□□ -0.89
CACNB3-217ENST00000550483 VGLL1Q99990 258 aa9.48□□□□□ -0.89
CACNB3-217ENST00000550483 OR4C46A6NHA9 309 aa9.47□□□□□ -0.89
CACNB3-217ENST00000550483 DUSP14O95147 198 aaKnown RBP9.47□□□□□ -0.89
CACNB3-217ENST00000550483 CSN3P07498 182 aa9.47□□□□□ -0.89
CACNB3-217ENST00000550483 FOXA3P55318 350 aaPredicted RBP9.47□□□□□ -0.89
CACNB3-217ENST00000550483 CMC4P56277 68 aaPredicted RBP9.47□□□□□ -0.89
CACNB3-217ENST00000550483 OR2D3Q8NGH3 330 aa9.47□□□□□ -0.89
CACNB3-217ENST00000550483 SPAG8Q99932 426 aaPredicted RBP9.47□□□□□ -0.89
CACNB3-217ENST00000550483 AGPAT4-IT1Q9H0P7 198 aa9.47□□□□□ -0.89
CACNB3-217ENST00000550483 A0A1B0GW15 77 aa9.46□□□□□ -0.9
CACNB3-217ENST00000550483 PRAC2D3DTV9 90 aa9.46□□□□□ -0.9
CACNB3-217ENST00000550483 S100A8P05109 93 aa9.46□□□□□ -0.9
CACNB3-217ENST00000550483 EBLN2Q6P2I7 272 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms