RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 H3BQ15 152 aa5.27□□□□□ -1.57
NEK3-201ENST00000550331 GAGE7O76087 117 aa5.27□□□□□ -1.57
NEK3-201ENST00000550331 SNRPCP09234 159 aaKnown RBP5.27□□□□□ -1.57
NEK3-201ENST00000550331 GAGE12FP0CL80 117 aa5.27□□□□□ -1.57
NEK3-201ENST00000550331 GAGE12GP0CL81 117 aa5.27□□□□□ -1.57
NEK3-201ENST00000550331 GAGE12IP0CL82 117 aa5.27□□□□□ -1.57
NEK3-201ENST00000550331 PRB4P10163 310 aaPredicted RBP5.27□□□□□ -1.57
NEK3-201ENST00000550331 CAMLGP49069 296 aa5.27□□□□□ -1.57
NEK3-201ENST00000550331 DAZ2Q13117 558 aaKnown RBP5.27□□□□□ -1.57
NEK3-201ENST00000550331 ESRGQ1W209 222 aa5.27□□□□□ -1.57
NEK3-201ENST00000550331 SPATA12Q7Z6I5 190 aa5.27□□□□□ -1.57
NEK3-201ENST00000550331 ZNF680Q8NEM1 530 aa5.27□□□□□ -1.57
NEK3-201ENST00000550331 OR1L4Q8NGR5 311 aa5.27□□□□□ -1.57
NEK3-201ENST00000550331 ZNF431Q8TF32 576 aaPredicted RBP5.27□□□□□ -1.57
NEK3-201ENST00000550331 PFDN5Q99471 154 aa5.27□□□□□ -1.57
NEK3-201ENST00000550331 PARD6GQ9BYG4 376 aaPredicted RBP5.27□□□□□ -1.57
NEK3-201ENST00000550331 KRTAP1-5Q9BYS1 174 aa5.27□□□□□ -1.57
NEK3-201ENST00000550331 DNAJC4Q9NNZ3 241 aa5.27□□□□□ -1.57
NEK3-201ENST00000550331 GSKIPQ9P0R6 139 aa5.27□□□□□ -1.57
NEK3-201ENST00000550331 VPS13BQ7Z7G8 4022 aa5.26□□□□□ -1.57
NEK3-201ENST00000550331 TRAV12-3A0A0B4J271 114 aa5.26□□□□□ -1.57
NEK3-201ENST00000550331 A0A0J9YY99 117 aa5.26□□□□□ -1.57
NEK3-201ENST00000550331 LINC00854A0A1B0GVQ3 168 aa5.26□□□□□ -1.57
NEK3-201ENST00000550331 EPM2AB3EWF7 344 aa5.26□□□□□ -1.57
NEK3-201ENST00000550331 H3BTX0 84 aa5.26□□□□□ -1.57
NEK3-201ENST00000550331 L7N2F9 121 aa5.26□□□□□ -1.57
NEK3-201ENST00000550331 SLC25A5P05141 298 aaKnown RBP5.26□□□□□ -1.57
NEK3-201ENST00000550331 INAFM2P0DMQ5 153 aa5.26□□□□□ -1.57
NEK3-201ENST00000550331 CT45A10P0DMU9 189 aa5.26□□□□□ -1.57
NEK3-201ENST00000550331 VAMP2P63027 116 aa5.26□□□□□ -1.57
NEK3-201ENST00000550331 ZNF846Q147U1 533 aa5.26□□□□□ -1.57
NEK3-201ENST00000550331 VWC2Q2TAL6 325 aa5.26□□□□□ -1.57
NEK3-201ENST00000550331 MIC13Q5XKP0 118 aa5.26□□□□□ -1.57
NEK3-201ENST00000550331 NRARPQ7Z6K4 114 aa5.26□□□□□ -1.57
NEK3-201ENST00000550331 SDHCQ99643 169 aaPredicted RBP5.26□□□□□ -1.57
NEK3-201ENST00000550331 LINC00467Q9BRT7 94 aa5.26□□□□□ -1.57
NEK3-201ENST00000550331 C20orf85Q9H1P6 137 aa5.26□□□□□ -1.57
NEK3-201ENST00000550331 UQCC1Q9NVA1 299 aa5.26□□□□□ -1.57
NEK3-201ENST00000550331 WDR83OSQ9Y284 106 aa5.26□□□□□ -1.57
NEK3-201ENST00000550331 TRBV19A0A075B6N1 114 aa5.25□□□□□ -1.57
NEK3-201ENST00000550331 A0A096LPF7 62 aa5.25□□□□□ -1.57
NEK3-201ENST00000550331 TRAV5A0A0B4J249 113 aa5.25□□□□□ -1.57
NEK3-201ENST00000550331 C7orf71A4D174 169 aa5.25□□□□□ -1.57
NEK3-201ENST00000550331 KLLNB2CW77 178 aa5.25□□□□□ -1.57
NEK3-201ENST00000550331 J3KRW8 73 aa5.25□□□□□ -1.57
NEK3-201ENST00000550331 CST7O76096 145 aa5.25□□□□□ -1.57
NEK3-201ENST00000550331 IL7P13232 177 aa5.25□□□□□ -1.57
NEK3-201ENST00000550331 RPL29P47914 159 aaKnown RBP5.25□□□□□ -1.57
NEK3-201ENST00000550331 CAV2P51636 162 aa5.25□□□□□ -1.57
NEK3-201ENST00000550331 PDE6HQ13956 83 aa5.25□□□□□ -1.57
NEK3-201ENST00000550331 Q6ZTI0 123 aa5.25□□□□□ -1.57
NEK3-201ENST00000550331 C12orf45Q8N5I9 185 aaPredicted RBP5.25□□□□□ -1.57
NEK3-201ENST00000550331 C11orf72Q8NBR9 251 aa5.25□□□□□ -1.57
NEK3-201ENST00000550331 VSIG2Q96IQ7 327 aa5.25□□□□□ -1.57
NEK3-201ENST00000550331 C11orf1Q9H5F2 150 aa5.25□□□□□ -1.57
NEK3-201ENST00000550331 SLC39A9Q9NUM3 307 aa5.25□□□□□ -1.57
NEK3-201ENST00000550331 ZNF586Q9NXT0 402 aa5.25□□□□□ -1.57
NEK3-201ENST00000550331 TMEM14CQ9P0S9 112 aa5.25□□□□□ -1.57
NEK3-201ENST00000550331 PRELID1Q9Y255 219 aa5.25□□□□□ -1.57
NEK3-201ENST00000550331 TRGV2A0A075B6R0 118 aa5.24□□□□□ -1.57
NEK3-201ENST00000550331 CCSO14618 274 aa5.24□□□□□ -1.57
NEK3-201ENST00000550331 ZNF324O75467 553 aaPredicted RBP5.24□□□□□ -1.57
NEK3-201ENST00000550331 NMBP08949 121 aa5.24□□□□□ -1.57
NEK3-201ENST00000550331 HIST1H1EP10412 219 aaKnown RBP5.24□□□□□ -1.57
NEK3-201ENST00000550331 PVALBP20472 110 aaPredicted RBP5.24□□□□□ -1.57
NEK3-201ENST00000550331 S100A11P31949 105 aa5.24□□□□□ -1.57
NEK3-201ENST00000550331 SULT1A1P50225 295 aa5.24□□□□□ -1.57
NEK3-201ENST00000550331 BCAP31P51572 246 aa5.24□□□□□ -1.57
NEK3-201ENST00000550331 TCL1AP56279 114 aa5.24□□□□□ -1.57
NEK3-201ENST00000550331 ANXA2RQ3ZCQ2 193 aa5.24□□□□□ -1.57
NEK3-201ENST00000550331 IBA57Q5T440 356 aaKnown RBP5.24□□□□□ -1.57
NEK3-201ENST00000550331 STX12Q86Y82 276 aa5.24□□□□□ -1.57
NEK3-201ENST00000550331 FAM19A4Q96LR4 140 aa5.24□□□□□ -1.57
NEK3-201ENST00000550331 LINC00477Q96M19 166 aa5.24□□□□□ -1.57
NEK3-201ENST00000550331 GSN-AS1Q9NRJ2 163 aa5.24□□□□□ -1.57
NEK3-201ENST00000550331 LSM5Q9Y4Y9 91 aaKnown RBP5.24□□□□□ -1.57
NEK3-201ENST00000550331 FLG2Q5D862 2391 aaPredicted RBP5.24□□□□□ -1.57
NEK3-201ENST00000550331 UBE2L5PA0A1B0GUS4 154 aa5.23□□□□□ -1.57
NEK3-201ENST00000550331 FAM24AA6NFZ4 105 aa5.23□□□□□ -1.57
NEK3-201ENST00000550331 FAM25EA8MYX2 175 aa5.23□□□□□ -1.57
NEK3-201ENST00000550331 M0R3E3 92 aa5.23□□□□□ -1.57
NEK3-201ENST00000550331 PLA2G10O15496 165 aa5.23□□□□□ -1.57
NEK3-201ENST00000550331 SPINK4O60575 86 aa5.23□□□□□ -1.57
NEK3-201ENST00000550331 MPDU1O75352 247 aa5.23□□□□□ -1.57
NEK3-201ENST00000550331 NDUFB4O95168 129 aa5.23□□□□□ -1.57
NEK3-201ENST00000550331 CRISP2P16562 243 aa5.23□□□□□ -1.57
NEK3-201ENST00000550331 LINC00315P59091 139 aa5.23□□□□□ -1.57
NEK3-201ENST00000550331 HBG1P69891 147 aa5.23□□□□□ -1.57
NEK3-201ENST00000550331 HBG2P69892 147 aa5.23□□□□□ -1.57
NEK3-201ENST00000550331 SRSF3P84103 164 aaKnown RBP5.23□□□□□ -1.57
NEK3-201ENST00000550331 BAXQ07812 192 aa5.23□□□□□ -1.57
NEK3-201ENST00000550331 CD300CQ08708 224 aa5.23□□□□□ -1.57
NEK3-201ENST00000550331 Q6ZRN7 208 aaPredicted RBP5.23□□□□□ -1.57
NEK3-201ENST00000550331 C9orf47Q6ZRZ4 202 aa5.23□□□□□ -1.57
NEK3-201ENST00000550331 EIF4E3Q8N5X7 224 aaKnown RBP5.23□□□□□ -1.57
NEK3-201ENST00000550331 TMEM252Q8N6L7 170 aa5.23□□□□□ -1.57
NEK3-201ENST00000550331 ST6GAL2Q96JF0 529 aa5.23□□□□□ -1.57
NEK3-201ENST00000550331 C2orf50Q96LR7 162 aa5.23□□□□□ -1.57
NEK3-201ENST00000550331 AGPAT4-IT1Q9H0P7 198 aa5.23□□□□□ -1.57
NEK3-201ENST00000550331 AAMDCQ9H7C9 122 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms