RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-208ENST00000550283 SFT2D1Q8WV19 159 aa8.09□□□□□ -1.11
RAB5B-208ENST00000550283 RPUSD4Q96CM3 377 aaKnown RBP8.09□□□□□ -1.11
RAB5B-208ENST00000550283 FXYD5Q96DB9 178 aa8.09□□□□□ -1.11
RAB5B-208ENST00000550283 CLUHP3Q96NS8 147 aa8.09□□□□□ -1.11
RAB5B-208ENST00000550283 TMEM14CQ9P0S9 112 aa8.09□□□□□ -1.11
RAB5B-208ENST00000550283 CELA1Q9UNI1 258 aa8.09□□□□□ -1.11
RAB5B-208ENST00000550283 DNAH1Q9P2D7 4330 aa8.08□□□□□ -1.12
RAB5B-208ENST00000550283 TRAV12-2A0A075B6T6 113 aa8.08□□□□□ -1.12
RAB5B-208ENST00000550283 RBFOX3A6NFN3 312 aa8.08□□□□□ -1.12
RAB5B-208ENST00000550283 C9JQL5 133 aa8.08□□□□□ -1.12
RAB5B-208ENST00000550283 C3orf84H3BNL1 204 aa8.08□□□□□ -1.12
RAB5B-208ENST00000550283 HMGB3O15347 200 aaKnown RBP8.08□□□□□ -1.12
RAB5B-208ENST00000550283 MBP02144 154 aa8.08□□□□□ -1.12
RAB5B-208ENST00000550283 NANOS2P60321 138 aaKnown RBP8.08□□□□□ -1.12
RAB5B-208ENST00000550283 PSG9Q00887 426 aa8.08□□□□□ -1.12
RAB5B-208ENST00000550283 PMS2P11Q13670 270 aa8.08□□□□□ -1.12
RAB5B-208ENST00000550283 EBLN2Q6P2I7 272 aa8.08□□□□□ -1.12
RAB5B-208ENST00000550283 LCN15Q6UWW0 184 aa8.08□□□□□ -1.12
RAB5B-208ENST00000550283 ZNF705AQ6ZN79 300 aaPredicted RBP8.08□□□□□ -1.12
RAB5B-208ENST00000550283 SSX7Q7RTT5 188 aa8.08□□□□□ -1.12
RAB5B-208ENST00000550283 BLNKQ8WV28 456 aa8.08□□□□□ -1.12
RAB5B-208ENST00000550283 SMDT1Q9H4I9 107 aa8.08□□□□□ -1.12
RAB5B-208ENST00000550283 FUT9Q9Y231 359 aa8.08□□□□□ -1.12
RAB5B-208ENST00000550283 IGHV3OR16-12A0A075B7B8 117 aa8.07□□□□□ -1.12
RAB5B-208ENST00000550283 TRAV1-1A0A0B4J248 108 aa8.07□□□□□ -1.12
RAB5B-208ENST00000550283 IFNA1P01562 189 aa8.07□□□□□ -1.12
RAB5B-208ENST00000550283 CCL20P78556 96 aa8.07□□□□□ -1.12
RAB5B-208ENST00000550283 ERCC8Q13216 396 aa8.07□□□□□ -1.12
RAB5B-208ENST00000550283 MBD3L1Q8WWY6 194 aa8.07□□□□□ -1.12
RAB5B-208ENST00000550283 MAP1LC3B2A6NCE7 125 aa8.06□□□□□ -1.12
RAB5B-208ENST00000550283 CT45A10P0DMU9 189 aa8.06□□□□□ -1.12
RAB5B-208ENST00000550283 HIST1H1EP10412 219 aaKnown RBP8.06□□□□□ -1.12
RAB5B-208ENST00000550283 S100A7P31151 101 aa8.06□□□□□ -1.12
RAB5B-208ENST00000550283 ACOT6Q3I5F7 207 aaPredicted RBP8.06□□□□□ -1.12
RAB5B-208ENST00000550283 ZNF506Q5JVG8 444 aa8.06□□□□□ -1.12
RAB5B-208ENST00000550283 SAMD13Q5VXD3 122 aa8.06□□□□□ -1.12
RAB5B-208ENST00000550283 FAM122CQ6P4D5 195 aa8.06□□□□□ -1.12
RAB5B-208ENST00000550283 Q6ZQT7 251 aa8.06□□□□□ -1.12
RAB5B-208ENST00000550283 RPP25LQ8N5L8 163 aaKnown RBP8.06□□□□□ -1.12
RAB5B-208ENST00000550283 SLC50A1Q9BRV3 221 aa8.06□□□□□ -1.12
RAB5B-208ENST00000550283 PAXXQ9BUH6 204 aa8.06□□□□□ -1.12
RAB5B-208ENST00000550283 ACTR3CQ9C0K3 210 aaPredicted RBP8.06□□□□□ -1.12
RAB5B-208ENST00000550283 MAP1LC3BQ9GZQ8 125 aa8.06□□□□□ -1.12
RAB5B-208ENST00000550283 OR51M1Q9H341 326 aa8.06□□□□□ -1.12
RAB5B-208ENST00000550283 C11orf68Q9H3H3 251 aaKnown RBP8.06□□□□□ -1.12
RAB5B-208ENST00000550283 KCNIP2Q9NS61 270 aa8.06□□□□□ -1.12
RAB5B-208ENST00000550283 GNG13Q9P2W3 67 aa8.06□□□□□ -1.12
RAB5B-208ENST00000550283 ALMS1Q8TCU4 4167 aa8.05□□□□□ -1.12
RAB5B-208ENST00000550283 IGKV2-40A0A087WW87 121 aaPredicted RBP8.05□□□□□ -1.12
RAB5B-208ENST00000550283 CTXND1A0A1B0GTU2 59 aa8.05□□□□□ -1.12
RAB5B-208ENST00000550283 LOC102723971A0A1B0GUV8 181 aa8.05□□□□□ -1.12
RAB5B-208ENST00000550283 FAM74A7A6NL05 159 aa8.05□□□□□ -1.12
RAB5B-208ENST00000550283 IGKV2D-40P01614 121 aaPredicted RBP8.05□□□□□ -1.12
RAB5B-208ENST00000550283 NBEAP1P0C6P0 100 aa8.05□□□□□ -1.12
RAB5B-208ENST00000550283 ICAM4Q14773 271 aa8.05□□□□□ -1.12
RAB5B-208ENST00000550283 ZNF726P1Q15940 193 aa8.05□□□□□ -1.12
RAB5B-208ENST00000550283 FAM74A3Q4VXF1 159 aa8.05□□□□□ -1.12
RAB5B-208ENST00000550283 KHDC3LQ587J8 217 aa8.05□□□□□ -1.12
RAB5B-208ENST00000550283 CLRN3Q8NCR9 226 aa8.05□□□□□ -1.12
RAB5B-208ENST00000550283 OR10G4Q8NGN3 311 aa8.05□□□□□ -1.12
RAB5B-208ENST00000550283 OR10G9Q8NGN4 311 aa8.05□□□□□ -1.12
RAB5B-208ENST00000550283 OR10G7Q8NGN6 311 aa8.05□□□□□ -1.12
RAB5B-208ENST00000550283 RXFP4Q8TDU9 374 aa8.05□□□□□ -1.12
RAB5B-208ENST00000550283 MRPL32Q9BYC8 188 aaKnown RBP8.05□□□□□ -1.12
RAB5B-208ENST00000550283 HYDINQ4G0P3 5121 aa8.04□□□□□ -1.12
RAB5B-208ENST00000550283 ZNF705GA8MUZ8 300 aaPredicted RBP8.04□□□□□ -1.12
RAB5B-208ENST00000550283 NPIPB6E9PJ23 425 aa8.04□□□□□ -1.12
RAB5B-208ENST00000550283 M0R036 132 aa8.04□□□□□ -1.12
RAB5B-208ENST00000550283 OR7C2O60412 319 aa8.04□□□□□ -1.12
RAB5B-208ENST00000550283 ZNF253O75346 499 aa8.04□□□□□ -1.12
RAB5B-208ENST00000550283 DUSP14O95147 198 aaKnown RBP8.04□□□□□ -1.12
RAB5B-208ENST00000550283 SRP19P09132 144 aaKnown RBP8.04□□□□□ -1.12
RAB5B-208ENST00000550283 AZU1P20160 251 aa8.04□□□□□ -1.12
RAB5B-208ENST00000550283 FGF8P55075 233 aaPredicted RBP8.04□□□□□ -1.12
RAB5B-208ENST00000550283 RHOBP62745 196 aa8.04□□□□□ -1.12
RAB5B-208ENST00000550283 SOHLH1Q5JUK2 328 aa8.04□□□□□ -1.12
RAB5B-208ENST00000550283 S100A7AQ86SG5 101 aa8.04□□□□□ -1.12
RAB5B-208ENST00000550283 IGF2BP2-AS1Q96M15 143 aa8.04□□□□□ -1.12
RAB5B-208ENST00000550283 VGLL1Q99990 258 aa8.04□□□□□ -1.12
RAB5B-208ENST00000550283 PLAC8L1A1L4L8 177 aa8.03□□□□□ -1.12
RAB5B-208ENST00000550283 J3KRW8 73 aa8.03□□□□□ -1.12
RAB5B-208ENST00000550283 BCL2P10415 239 aa8.03□□□□□ -1.12
RAB5B-208ENST00000550283 MIFP14174 115 aa8.03□□□□□ -1.12
RAB5B-208ENST00000550283 CEBPGP53567 150 aa8.03□□□□□ -1.12
RAB5B-208ENST00000550283 NUTF2P61970 127 aaKnown RBP8.03□□□□□ -1.12
RAB5B-208ENST00000550283 UBE2L3P68036 154 aaKnown RBP8.03□□□□□ -1.12
RAB5B-208ENST00000550283 PRR9Q5T870 116 aa8.03□□□□□ -1.12
RAB5B-208ENST00000550283 AGPAT4-IT1Q9H0P7 198 aa8.03□□□□□ -1.12
RAB5B-208ENST00000550283 CXorf65A6NEN9 183 aa8.02□□□□□ -1.13
RAB5B-208ENST00000550283 ARL14EPLP0DKL9 152 aa8.02□□□□□ -1.13
RAB5B-208ENST00000550283 CDC34P49427 236 aaPredicted RBP8.02□□□□□ -1.13
RAB5B-208ENST00000550283 EMP1P54849 157 aa8.02□□□□□ -1.13
RAB5B-208ENST00000550283 RANP62826 216 aaKnown RBP8.02□□□□□ -1.13
RAB5B-208ENST00000550283 PDE6HQ13956 83 aa8.02□□□□□ -1.13
RAB5B-208ENST00000550283 C12orf74Q32Q52 190 aa8.02□□□□□ -1.13
RAB5B-208ENST00000550283 GFI1BQ5VTD9 330 aa8.02□□□□□ -1.13
RAB5B-208ENST00000550283 TMEM88Q6PEY1 159 aa8.02□□□□□ -1.13
RAB5B-208ENST00000550283 CBLN2Q8IUK8 224 aa8.02□□□□□ -1.13
RAB5B-208ENST00000550283 IQCF2Q8IXL9 164 aa8.02□□□□□ -1.13
RAB5B-208ENST00000550283 C11orf45Q8TAV5 145 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms