RNA–Protein interactions for RNA: ENST00000550280.1

SMARCD1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-208ENST00000550280 PAX4O43316 350 aa7.83□□□□□ -1.16
SMARCD1-208ENST00000550280 ZNF253O75346 499 aa7.83□□□□□ -1.16
SMARCD1-208ENST00000550280 SMR3BP02814 79 aaPredicted RBP7.83□□□□□ -1.16
SMARCD1-208ENST00000550280 CRISP2P16562 243 aa7.83□□□□□ -1.16
SMARCD1-208ENST00000550280 CRYBA4P53673 196 aa7.83□□□□□ -1.16
SMARCD1-208ENST00000550280 ERVFC1-1P60608 527 aa7.83□□□□□ -1.16
SMARCD1-208ENST00000550280 GUK1Q16774 197 aa7.83□□□□□ -1.16
SMARCD1-208ENST00000550280 VWC2Q2TAL6 325 aa7.83□□□□□ -1.16
SMARCD1-208ENST00000550280 CDPF1Q6NVV7 123 aa7.83□□□□□ -1.16
SMARCD1-208ENST00000550280 EIF4E3Q8N5X7 224 aaKnown RBP7.83□□□□□ -1.16
SMARCD1-208ENST00000550280 ZNF680Q8NEM1 530 aa7.83□□□□□ -1.16
SMARCD1-208ENST00000550280 MRPL53Q96EL3 112 aaKnown RBP7.83□□□□□ -1.16
SMARCD1-208ENST00000550280 ICOSQ9Y6W8 199 aa7.83□□□□□ -1.16
SMARCD1-208ENST00000550280 IGKV2-40A0A087WW87 121 aaPredicted RBP7.82□□□□□ -1.16
SMARCD1-208ENST00000550280 FAM24AA6NFZ4 105 aa7.82□□□□□ -1.16
SMARCD1-208ENST00000550280 CST7O76096 145 aa7.82□□□□□ -1.16
SMARCD1-208ENST00000550280 IGKV2D-40P01614 121 aaPredicted RBP7.82□□□□□ -1.16
SMARCD1-208ENST00000550280 PYYP10082 97 aa7.82□□□□□ -1.16
SMARCD1-208ENST00000550280 RNASE4P34096 147 aaKnown RBP7.82□□□□□ -1.16
SMARCD1-208ENST00000550280 GCSAMLQ5JQS6 135 aa7.82□□□□□ -1.16
SMARCD1-208ENST00000550280 WFDC10BQ8IUB3 73 aa7.82□□□□□ -1.16
SMARCD1-208ENST00000550280 EXOC3-AS1Q8N2X6 119 aa7.82□□□□□ -1.16
SMARCD1-208ENST00000550280 C8orf49Q96NF6 230 aa7.82□□□□□ -1.16
SMARCD1-208ENST00000550280 RBM38Q9H0Z9 239 aaKnown RBP7.82□□□□□ -1.16
SMARCD1-208ENST00000550280 SRRM2Q9UQ35 2752 aaKnown RBP7.82□□□□□ -1.16
SMARCD1-208ENST00000550280 HMCN2Q8NDA2 5059 aa7.81□□□□□ -1.16
SMARCD1-208ENST00000550280 NAP1L6A6NFF2 107 aa7.81□□□□□ -1.16
SMARCD1-208ENST00000550280 PRAF2O60831 178 aa7.81□□□□□ -1.16
SMARCD1-208ENST00000550280 NOL3O60936 208 aaKnown RBP7.81□□□□□ -1.16
SMARCD1-208ENST00000550280 IBA57Q5T440 356 aaKnown RBP7.81□□□□□ -1.16
SMARCD1-208ENST00000550280 C9orf47Q6ZRZ4 202 aa7.81□□□□□ -1.16
SMARCD1-208ENST00000550280 VGLL1Q99990 258 aa7.81□□□□□ -1.16
SMARCD1-208ENST00000550280 SLC39A9Q9NUM3 307 aa7.81□□□□□ -1.16
SMARCD1-208ENST00000550280 TMEM14CQ9P0S9 112 aa7.81□□□□□ -1.16
SMARCD1-208ENST00000550280 PRO0255Q9UI72 69 aa7.81□□□□□ -1.16
SMARCD1-208ENST00000550280 IGSF23A1L1A6 192 aa7.8□□□□□ -1.16
SMARCD1-208ENST00000550280 MPDU1O75352 247 aa7.8□□□□□ -1.16
SMARCD1-208ENST00000550280 SFTA3P0C7M3 94 aa7.8□□□□□ -1.16
SMARCD1-208ENST00000550280 HIST1H1EP10412 219 aaKnown RBP7.8□□□□□ -1.16
SMARCD1-208ENST00000550280 S100A5P33763 92 aa7.8□□□□□ -1.16
SMARCD1-208ENST00000550280 RPL29P47914 159 aaKnown RBP7.8□□□□□ -1.16
SMARCD1-208ENST00000550280 IL15RAQ13261 267 aa7.8□□□□□ -1.16
SMARCD1-208ENST00000550280 ICAM4Q14773 271 aa7.8□□□□□ -1.16
SMARCD1-208ENST00000550280 Q6ZRG5 221 aa7.8□□□□□ -1.16
SMARCD1-208ENST00000550280 OR1L4Q8NGR5 311 aa7.8□□□□□ -1.16
SMARCD1-208ENST00000550280 FAM167A-AS1Q96KT0 104 aa7.8□□□□□ -1.16
SMARCD1-208ENST00000550280 LINC00477Q96M19 166 aa7.8□□□□□ -1.16
SMARCD1-208ENST00000550280 UQCC1Q9NVA1 299 aa7.8□□□□□ -1.16
SMARCD1-208ENST00000550280 LSM5Q9Y4Y9 91 aaKnown RBP7.8□□□□□ -1.16
SMARCD1-208ENST00000550280 IGHV1OR15-1A0A075B7D0 117 aa7.79□□□□□ -1.16
SMARCD1-208ENST00000550280 UBE2L5PA0A1B0GUS4 154 aa7.79□□□□□ -1.16
SMARCD1-208ENST00000550280 K7EQD1 137 aa7.79□□□□□ -1.16
SMARCD1-208ENST00000550280 PLA2G10O15496 165 aa7.79□□□□□ -1.16
SMARCD1-208ENST00000550280 CAV2P51636 162 aa7.79□□□□□ -1.16
SMARCD1-208ENST00000550280 Q8TAT8 98 aa7.79□□□□□ -1.16
SMARCD1-208ENST00000550280 CHAC2Q8WUX2 184 aa7.79□□□□□ -1.16
SMARCD1-208ENST00000550280 BLNKQ8WV28 456 aa7.79□□□□□ -1.16
SMARCD1-208ENST00000550280 FRZBQ92765 325 aa7.79□□□□□ -1.16
SMARCD1-208ENST00000550280 ZNF479Q96JC4 524 aa7.79□□□□□ -1.16
SMARCD1-208ENST00000550280 SLC25A2Q9BXI2 301 aa7.79□□□□□ -1.16
SMARCD1-208ENST00000550280 ZNF492Q9P255 531 aa7.79□□□□□ -1.16
SMARCD1-208ENST00000550280 HHLA3Q9XRX5 114 aa7.79□□□□□ -1.16
SMARCD1-208ENST00000550280 LRCOL1A6NCL2 159 aa7.78□□□□□ -1.16
SMARCD1-208ENST00000550280 GPX1P07203 203 aa7.78□□□□□ -1.16
SMARCD1-208ENST00000550280 NMBP08949 121 aa7.78□□□□□ -1.16
SMARCD1-208ENST00000550280 BCAP31P51572 246 aa7.78□□□□□ -1.16
SMARCD1-208ENST00000550280 PDE6HQ13956 83 aa7.78□□□□□ -1.16
SMARCD1-208ENST00000550280 MRPL23Q16540 153 aaKnown RBP7.78□□□□□ -1.16
SMARCD1-208ENST00000550280 TRIQKQ629K1 86 aa7.78□□□□□ -1.16
SMARCD1-208ENST00000550280 NEGR1Q7Z3B1 354 aa7.78□□□□□ -1.16
SMARCD1-208ENST00000550280 TMEM252Q8N6L7 170 aa7.78□□□□□ -1.16
SMARCD1-208ENST00000550280 PFDN5Q99471 154 aa7.78□□□□□ -1.16
SMARCD1-208ENST00000550280 SEC22CQ9BRL7 303 aa7.78□□□□□ -1.16
SMARCD1-208ENST00000550280 MRPL32Q9BYC8 188 aaKnown RBP7.78□□□□□ -1.16
SMARCD1-208ENST00000550280 MSRB1Q9NZV6 116 aa7.78□□□□□ -1.16
SMARCD1-208ENST00000550280 PRELID1Q9Y255 219 aa7.78□□□□□ -1.16
SMARCD1-208ENST00000550280 LY96Q9Y6Y9 160 aa7.78□□□□□ -1.16
SMARCD1-208ENST00000550280 LOC100131303A0A0U1RQF7 123 aa7.77□□□□□ -1.17
SMARCD1-208ENST00000550280 E5RGE8 158 aa7.77□□□□□ -1.17
SMARCD1-208ENST00000550280 L7N2F9 121 aa7.77□□□□□ -1.17
SMARCD1-208ENST00000550280 RGS13O14921 159 aa7.77□□□□□ -1.17
SMARCD1-208ENST00000550280 EREGO14944 169 aa7.77□□□□□ -1.17
SMARCD1-208ENST00000550280 IL7P13232 177 aa7.77□□□□□ -1.17
SMARCD1-208ENST00000550280 GCSHP23434 173 aa7.77□□□□□ -1.17
SMARCD1-208ENST00000550280 VAMP2P63027 116 aa7.77□□□□□ -1.17
SMARCD1-208ENST00000550280 BAXQ07812 192 aa7.77□□□□□ -1.17
SMARCD1-208ENST00000550280 SPANXN2Q5MJ10 180 aa7.77□□□□□ -1.17
SMARCD1-208ENST00000550280 FAM122CQ6P4D5 195 aa7.77□□□□□ -1.17
SMARCD1-208ENST00000550280 MIR17HGQ75NE6 70 aa7.77□□□□□ -1.17
SMARCD1-208ENST00000550280 NFE4Q86UQ8 179 aa7.77□□□□□ -1.17
SMARCD1-208ENST00000550280 C20orf85Q9H1P6 137 aa7.77□□□□□ -1.17
SMARCD1-208ENST00000550280 LYRM2Q9NU23 88 aaPredicted RBP7.77□□□□□ -1.17
SMARCD1-208ENST00000550280 PTTG2Q9NZH5 202 aa7.77□□□□□ -1.17
SMARCD1-208ENST00000550280 FAM30AQ9NZY2 134 aa7.77□□□□□ -1.17
SMARCD1-208ENST00000550280 LRP1Q07954 4544 aaKnown RBP7.77□□□□□ -1.17
SMARCD1-208ENST00000550280 FGF7P21781 194 aa7.76□□□□□ -1.17
SMARCD1-208ENST00000550280 SULT1A1P50225 295 aa7.76□□□□□ -1.17
SMARCD1-208ENST00000550280 RAB31Q13636 194 aa7.76□□□□□ -1.17
SMARCD1-208ENST00000550280 RAB32Q13637 225 aa7.76□□□□□ -1.17
SMARCD1-208ENST00000550280 MUC21Q5SSG8 566 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms