RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 FAM3BP58499 235 aaPredicted RBP11.43□□□□□ -0.58
VPS29-207ENST00000549970 OR5I1Q13606 314 aa11.43□□□□□ -0.58
VPS29-207ENST00000549970 ICAM4Q14773 271 aa11.43□□□□□ -0.58
VPS29-207ENST00000549970 FAM122CQ6P4D5 195 aa11.43□□□□□ -0.58
VPS29-207ENST00000549970 LINC00612Q8N6U2 182 aa11.43□□□□□ -0.58
VPS29-207ENST00000549970 LINC00477Q96M19 166 aa11.43□□□□□ -0.58
VPS29-207ENST00000549970 AGPAT4-IT1Q9H0P7 198 aa11.43□□□□□ -0.58
VPS29-207ENST00000549970 KCNIP2Q9NS61 270 aa11.43□□□□□ -0.58
VPS29-207ENST00000549970 IGKV2-40A0A087WW87 121 aaPredicted RBP11.42□□□□□ -0.58
VPS29-207ENST00000549970 SSNA1O43805 119 aa11.42□□□□□ -0.58
VPS29-207ENST00000549970 IGKV2D-40P01614 121 aaPredicted RBP11.42□□□□□ -0.58
VPS29-207ENST00000549970 OR10J4P0C629 311 aa11.42□□□□□ -0.58
VPS29-207ENST00000549970 DEFA1P59665 94 aa11.42□□□□□ -0.58
VPS29-207ENST00000549970 DEFA3P59666 94 aa11.42□□□□□ -0.58
VPS29-207ENST00000549970 BTN1A1Q13410 526 aa11.42□□□□□ -0.58
VPS29-207ENST00000549970 SOHLH1Q5JUK2 328 aa11.42□□□□□ -0.58
VPS29-207ENST00000549970 MRPL32Q9BYC8 188 aaKnown RBP11.42□□□□□ -0.58
VPS29-207ENST00000549970 OR51M1Q9H341 326 aa11.42□□□□□ -0.58
VPS29-207ENST00000549970 TRAV26-1A0A087WT03 109 aa11.41□□□□□ -0.58
VPS29-207ENST00000549970 KLLNB2CW77 178 aa11.41□□□□□ -0.58
VPS29-207ENST00000549970 C17orf112F2Z3M2 114 aa11.41□□□□□ -0.58
VPS29-207ENST00000549970 NBEAP1P0C6P0 100 aa11.41□□□□□ -0.58
VPS29-207ENST00000549970 RNASE4P34096 147 aaKnown RBP11.41□□□□□ -0.58
VPS29-207ENST00000549970 CCL18P55774 89 aa11.41□□□□□ -0.58
VPS29-207ENST00000549970 CD300CQ08708 224 aa11.41□□□□□ -0.58
VPS29-207ENST00000549970 C1orf134Q5TEV5 83 aa11.41□□□□□ -0.58
VPS29-207ENST00000549970 FAM19A4Q96LR4 140 aa11.41□□□□□ -0.58
VPS29-207ENST00000549970 ATP5SQ99766 215 aa11.41□□□□□ -0.58
VPS29-207ENST00000549970 PAXXQ9BUH6 204 aa11.41□□□□□ -0.58
VPS29-207ENST00000549970 A0A0J9YY99 117 aa11.4□□□□□ -0.58
VPS29-207ENST00000549970 MPC2O95563 127 aa11.4□□□□□ -0.58
VPS29-207ENST00000549970 TMEM78Q5T7P6 136 aa11.4□□□□□ -0.58
VPS29-207ENST00000549970 C9orf47Q6ZRZ4 202 aa11.4□□□□□ -0.58
VPS29-207ENST00000549970 ZNRF2Q8NHG8 242 aa11.4□□□□□ -0.58
VPS29-207ENST00000549970 FXYD5Q96DB9 178 aa11.4□□□□□ -0.58
VPS29-207ENST00000549970 GNPNAT1Q96EK6 184 aaPredicted RBP11.4□□□□□ -0.58
VPS29-207ENST00000549970 PHYHIPLQ96FC7 376 aa11.4□□□□□ -0.58
VPS29-207ENST00000549970 VGLL1Q99990 258 aa11.4□□□□□ -0.58
VPS29-207ENST00000549970 SMIM3Q9BZL3 60 aa11.4□□□□□ -0.58
VPS29-207ENST00000549970 FUT9Q9Y231 359 aa11.4□□□□□ -0.58
VPS29-207ENST00000549970 LINC00588Q9Y4M8 146 aa11.4□□□□□ -0.58
VPS29-207ENST00000549970 HSPB11Q9Y547 144 aa11.4□□□□□ -0.58
VPS29-207ENST00000549970 OR7C2O60412 319 aa11.39□□□□□ -0.59
VPS29-207ENST00000549970 ZNF324O75467 553 aaPredicted RBP11.39□□□□□ -0.59
VPS29-207ENST00000549970 GPX1P07203 203 aa11.39□□□□□ -0.59
VPS29-207ENST00000549970 PET100P0DJ07 73 aa11.39□□□□□ -0.59
VPS29-207ENST00000549970 M6PRP20645 277 aa11.39□□□□□ -0.59
VPS29-207ENST00000549970 HOXA5P20719 270 aa11.39□□□□□ -0.59
VPS29-207ENST00000549970 DAZ2Q13117 558 aaKnown RBP11.39□□□□□ -0.59
VPS29-207ENST00000549970 Q6ZTI0 123 aa11.39□□□□□ -0.59
VPS29-207ENST00000549970 ZNF680Q8NEM1 530 aa11.39□□□□□ -0.59
VPS29-207ENST00000549970 TMPRSS5Q9H3S3 457 aa11.39□□□□□ -0.59
VPS29-207ENST00000549970 GSN-AS1Q9NRJ2 163 aa11.39□□□□□ -0.59
VPS29-207ENST00000549970 NBDYA0A0U1RRE5 68 aa11.38□□□□□ -0.59
VPS29-207ENST00000549970 CRISP2P16562 243 aa11.38□□□□□ -0.59
VPS29-207ENST00000549970 FFAR4Q5NUL3 377 aa11.38□□□□□ -0.59
VPS29-207ENST00000549970 PRR9Q5T870 116 aa11.38□□□□□ -0.59
VPS29-207ENST00000549970 SSX7Q7RTT5 188 aa11.38□□□□□ -0.59
VPS29-207ENST00000549970 EIF4E3Q8N5X7 224 aaKnown RBP11.38□□□□□ -0.59
VPS29-207ENST00000549970 C11orf72Q8NBR9 251 aa11.38□□□□□ -0.59
VPS29-207ENST00000549970 RXFP4Q8TDU9 374 aa11.38□□□□□ -0.59
VPS29-207ENST00000549970 MBD2Q9UBB5 411 aa11.38□□□□□ -0.59
VPS29-207ENST00000549970 TRGV2A0A075B6R0 118 aa11.37□□□□□ -0.59
VPS29-207ENST00000549970 IFNA5P01569 189 aa11.37□□□□□ -0.59
VPS29-207ENST00000549970 RPL12P30050 165 aaKnown RBP11.37□□□□□ -0.59
VPS29-207ENST00000549970 ZFAND2AQ8N6M9 145 aa11.37□□□□□ -0.59
VPS29-207ENST00000549970 Q8TAT8 98 aa11.37□□□□□ -0.59
VPS29-207ENST00000549970 SCGB1C1Q8TD33 95 aa11.37□□□□□ -0.59
VPS29-207ENST00000549970 ZNF503Q96F45 646 aa11.37□□□□□ -0.59
VPS29-207ENST00000549970 ZNF492Q9P255 531 aa11.37□□□□□ -0.59
VPS29-207ENST00000549970 TRGV1A0A0A0MS02 117 aa11.36□□□□□ -0.59
VPS29-207ENST00000549970 RGS13O14921 159 aa11.36□□□□□ -0.59
VPS29-207ENST00000549970 EIF3GO75821 320 aaKnown RBP eCLIP11.36□□□□□ -0.59
VPS29-207ENST00000549970 NMBP08949 121 aa11.36□□□□□ -0.59
VPS29-207ENST00000549970 RANP62826 216 aaKnown RBP11.36□□□□□ -0.59
VPS29-207ENST00000549970 UBE2L3P68036 154 aaKnown RBP11.36□□□□□ -0.59
VPS29-207ENST00000549970 ANXA2RQ3ZCQ2 193 aa11.36□□□□□ -0.59
VPS29-207ENST00000549970 Q6ZQT7 251 aa11.36□□□□□ -0.59
VPS29-207ENST00000549970 LINC00467Q9BRT7 94 aa11.36□□□□□ -0.59
VPS29-207ENST00000549970 KLF12Q9Y4X4 402 aa11.36□□□□□ -0.59
VPS29-207ENST00000549970 CSN1S1P47710 185 aa11.35□□□□□ -0.59
VPS29-207ENST00000549970 ZNF138P52744 262 aa11.35□□□□□ -0.59
VPS29-207ENST00000549970 KHDC3LQ587J8 217 aa11.35□□□□□ -0.59
VPS29-207ENST00000549970 Q9H3A6 140 aa11.35□□□□□ -0.59
VPS29-207ENST00000549970 TP53TG3Q9ULZ0 132 aa11.35□□□□□ -0.59
VPS29-207ENST00000549970 IGHV1OR15-1A0A075B7D0 117 aa11.34□□□□□ -0.59
VPS29-207ENST00000549970 TCL1AP56279 114 aa11.34□□□□□ -0.59
VPS29-207ENST00000549970 TAS2R45P59539 299 aa11.34□□□□□ -0.59
VPS29-207ENST00000549970 C6orf223Q8N319 242 aa11.34□□□□□ -0.59
VPS29-207ENST00000549970 ARPC5LQ9BPX5 153 aa11.34□□□□□ -0.59
VPS29-207ENST00000549970 KRTAP17-1Q9BYP8 105 aa11.34□□□□□ -0.59
VPS29-207ENST00000549970 SPINK4O60575 86 aa11.33□□□□□ -0.6
VPS29-207ENST00000549970 MED14OSP0DP75 135 aa11.33□□□□□ -0.6
VPS29-207ENST00000549970 TNP2Q05952 138 aa11.33□□□□□ -0.6
VPS29-207ENST00000549970 LYPD1Q8N2G4 141 aa11.33□□□□□ -0.6
VPS29-207ENST00000549970 Q9H8V8 135 aa11.33□□□□□ -0.6
VPS29-207ENST00000549970 WFDC1Q9HC57 220 aa11.33□□□□□ -0.6
VPS29-207ENST00000549970 MUC4Q99102 2169 aa11.33□□□□□ -0.6
VPS29-207ENST00000549970 H3BNG1 76 aa11.32□□□□□ -0.6
VPS29-207ENST00000549970 ESRGQ1W209 222 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms