RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 PARD6GQ9BYG4 376 aaPredicted RBP8.51□□□□□ -1.05
DDX54-206ENST00000549271 WFDC1Q9HC57 220 aa8.51□□□□□ -1.05
DDX54-206ENST00000549271 PPP1R14DQ9NXH3 145 aa8.51□□□□□ -1.05
DDX54-206ENST00000549271 MBD2Q9UBB5 411 aa8.51□□□□□ -1.05
DDX54-206ENST00000549271 M0R3E3 92 aa8.5□□□□□ -1.05
DDX54-206ENST00000549271 PTTG1O95997 202 aa8.5□□□□□ -1.05
DDX54-206ENST00000549271 CT45A10P0DMU9 189 aa8.5□□□□□ -1.05
DDX54-206ENST00000549271 TMEM256Q8N2U0 113 aa8.5□□□□□ -1.05
DDX54-206ENST00000549271 OR10J6PQ8NGY7 276 aa8.5□□□□□ -1.05
DDX54-206ENST00000549271 FRZBQ92765 325 aa8.5□□□□□ -1.05
DDX54-206ENST00000549271 LINC01587Q99440 93 aa8.5□□□□□ -1.05
DDX54-206ENST00000549271 CBY3A6NI87 242 aa8.49□□□□□ -1.05
DDX54-206ENST00000549271 NPIPB6E9PJ23 425 aa8.49□□□□□ -1.05
DDX54-206ENST00000549271 PET100P0DJ07 73 aa8.49□□□□□ -1.05
DDX54-206ENST00000549271 BTF3P20290 206 aaKnown RBP8.49□□□□□ -1.05
DDX54-206ENST00000549271 PDE6HQ13956 83 aa8.49□□□□□ -1.05
DDX54-206ENST00000549271 BLNKQ8WV28 456 aa8.49□□□□□ -1.05
DDX54-206ENST00000549271 MRPL53Q96EL3 112 aaKnown RBP8.49□□□□□ -1.05
DDX54-206ENST00000549271 ATG101Q9BSB4 218 aa8.49□□□□□ -1.05
DDX54-206ENST00000549271 SMIM3Q9BZL3 60 aa8.49□□□□□ -1.05
DDX54-206ENST00000549271 ATP5G1P05496 136 aa8.48□□□□□ -1.05
DDX54-206ENST00000549271 NBEAP1P0C6P0 100 aa8.48□□□□□ -1.05
DDX54-206ENST00000549271 DEFB130BP0DP73 79 aa8.48□□□□□ -1.05
DDX54-206ENST00000549271 DEFB130AP0DP74 79 aa8.48□□□□□ -1.05
DDX54-206ENST00000549271 ATP5G3P48201 142 aa8.48□□□□□ -1.05
DDX54-206ENST00000549271 TAS2R60P59551 318 aa8.48□□□□□ -1.05
DDX54-206ENST00000549271 ERCC8Q13216 396 aa8.48□□□□□ -1.05
DDX54-206ENST00000549271 FCN2Q15485 313 aa8.48□□□□□ -1.05
DDX54-206ENST00000549271 GFI1BQ5VTD9 330 aa8.48□□□□□ -1.05
DDX54-206ENST00000549271 EXOC3-AS1Q8N2X6 119 aa8.48□□□□□ -1.05
DDX54-206ENST00000549271 FXYD5Q96DB9 178 aa8.48□□□□□ -1.05
DDX54-206ENST00000549271 ZNF503Q96F45 646 aa8.48□□□□□ -1.05
DDX54-206ENST00000549271 ODF3Q96PU9 254 aa8.48□□□□□ -1.05
DDX54-206ENST00000549271 OR51M1Q9H341 326 aa8.48□□□□□ -1.05
DDX54-206ENST00000549271 KCNIP2Q9NS61 270 aa8.48□□□□□ -1.05
DDX54-206ENST00000549271 FUT9Q9Y231 359 aa8.48□□□□□ -1.05
DDX54-206ENST00000549271 PRELID1Q9Y255 219 aa8.48□□□□□ -1.05
DDX54-206ENST00000549271 TIMM9Q9Y5J7 89 aa8.48□□□□□ -1.05
DDX54-206ENST00000549271 C17orf112F2Z3M2 114 aa8.47□□□□□ -1.05
DDX54-206ENST00000549271 F5H768 121 aa8.47□□□□□ -1.05
DDX54-206ENST00000549271 FFAR4Q5NUL3 377 aa8.47□□□□□ -1.05
DDX54-206ENST00000549271 ZNF493Q6ZR52 646 aa8.47□□□□□ -1.05
DDX54-206ENST00000549271 SCGB1C1Q8TD33 95 aa8.47□□□□□ -1.05
DDX54-206ENST00000549271 RNF141Q8WVD5 230 aa8.47□□□□□ -1.05
DDX54-206ENST00000549271 C16orf74Q96GX8 76 aa8.47□□□□□ -1.05
DDX54-206ENST00000549271 FAM19A4Q96LR4 140 aa8.47□□□□□ -1.05
DDX54-206ENST00000549271 C20orf144Q9BQM9 153 aa8.47□□□□□ -1.05
DDX54-206ENST00000549271 PAXXQ9BUH6 204 aa8.47□□□□□ -1.05
DDX54-206ENST00000549271 MRPL32Q9BYC8 188 aaKnown RBP8.47□□□□□ -1.05
DDX54-206ENST00000549271 AGPAT4-IT1Q9H0P7 198 aa8.47□□□□□ -1.05
DDX54-206ENST00000549271 H7BYZ3 331 aa8.46□□□□□ -1.06
DDX54-206ENST00000549271 J3QL48 77 aa8.46□□□□□ -1.06
DDX54-206ENST00000549271 IFNA5P01569 189 aa8.46□□□□□ -1.06
DDX54-206ENST00000549271 OR10J4P0C629 311 aa8.46□□□□□ -1.06
DDX54-206ENST00000549271 HTN1P15515 57 aa8.46□□□□□ -1.06
DDX54-206ENST00000549271 CCL18P55774 89 aa8.46□□□□□ -1.06
DDX54-206ENST00000549271 ICAM4Q14773 271 aa8.46□□□□□ -1.06
DDX54-206ENST00000549271 Q5BKY6 102 aa8.46□□□□□ -1.06
DDX54-206ENST00000549271 RNASE8Q8TDE3 154 aaKnown RBP8.46□□□□□ -1.06
DDX54-206ENST00000549271 LINC00477Q96M19 166 aa8.46□□□□□ -1.06
DDX54-206ENST00000549271 MED28Q9H204 178 aa8.46□□□□□ -1.06
DDX54-206ENST00000549271 TIMM8BQ9Y5J9 83 aaPredicted RBP8.46□□□□□ -1.06
DDX54-206ENST00000549271 TRAV12-3A0A0B4J271 114 aa8.45□□□□□ -1.06
DDX54-206ENST00000549271 J3KRW8 73 aa8.45□□□□□ -1.06
DDX54-206ENST00000549271 NUDT3O95989 172 aa8.45□□□□□ -1.06
DDX54-206ENST00000549271 LEPP41159 167 aa8.45□□□□□ -1.06
DDX54-206ENST00000549271 C9orf47Q6ZRZ4 202 aa8.45□□□□□ -1.06
DDX54-206ENST00000549271 LINC00612Q8N6U2 182 aa8.45□□□□□ -1.06
DDX54-206ENST00000549271 PHYHIPLQ96FC7 376 aa8.45□□□□□ -1.06
DDX54-206ENST00000549271 VGLL1Q99990 258 aa8.45□□□□□ -1.06
DDX54-206ENST00000549271 KRTAP1-5Q9BYS1 174 aa8.45□□□□□ -1.06
DDX54-206ENST00000549271 LINC00588Q9Y4M8 146 aa8.45□□□□□ -1.06
DDX54-206ENST00000549271 IGKV2-40A0A087WW87 121 aaPredicted RBP8.44□□□□□ -1.06
DDX54-206ENST00000549271 KLLNB2CW77 178 aa8.44□□□□□ -1.06
DDX54-206ENST00000549271 OR7C2O60412 319 aa8.44□□□□□ -1.06
DDX54-206ENST00000549271 ZNF324O75467 553 aaPredicted RBP8.44□□□□□ -1.06
DDX54-206ENST00000549271 EIF3GO75821 320 aaKnown RBP eCLIP8.44□□□□□ -1.06
DDX54-206ENST00000549271 IGKV2D-40P01614 121 aaPredicted RBP8.44□□□□□ -1.06
DDX54-206ENST00000549271 CD300CQ08708 224 aa8.44□□□□□ -1.06
DDX54-206ENST00000549271 FAM122CQ6P4D5 195 aa8.44□□□□□ -1.06
DDX54-206ENST00000549271 TMEM263Q8WUH6 116 aaKnown RBP8.44□□□□□ -1.06
DDX54-206ENST00000549271 AAMDCQ9H7C9 122 aa8.44□□□□□ -1.06
DDX54-206ENST00000549271 NOP10Q9NPE3 64 aaKnown RBP8.44□□□□□ -1.06
DDX54-206ENST00000549271 MDFICQ9P1T7 246 aa8.44□□□□□ -1.06
DDX54-206ENST00000549271 SLC25A5P05141 298 aaKnown RBP8.43□□□□□ -1.06
DDX54-206ENST00000549271 CRISP2P16562 243 aa8.43□□□□□ -1.06
DDX54-206ENST00000549271 RANP62826 216 aaKnown RBP8.43□□□□□ -1.06
DDX54-206ENST00000549271 AQP10Q96PS8 301 aa8.43□□□□□ -1.06
DDX54-206ENST00000549271 C7orf71A4D174 169 aa8.42□□□□□ -1.06
DDX54-206ENST00000549271 H3BNG1 76 aa8.42□□□□□ -1.06
DDX54-206ENST00000549271 GIPP09681 153 aaPredicted RBP8.42□□□□□ -1.06
DDX54-206ENST00000549271 M6PRP20645 277 aa8.42□□□□□ -1.06
DDX54-206ENST00000549271 RNASE4P34096 147 aaKnown RBP8.42□□□□□ -1.06
DDX54-206ENST00000549271 RAB2AP61019 212 aa8.42□□□□□ -1.06
DDX54-206ENST00000549271 BTN1A1Q13410 526 aa8.42□□□□□ -1.06
DDX54-206ENST00000549271 ACOT6Q3I5F7 207 aaPredicted RBP8.42□□□□□ -1.06
DDX54-206ENST00000549271 KHDC3LQ587J8 217 aa8.42□□□□□ -1.06
DDX54-206ENST00000549271 PRR9Q5T870 116 aa8.42□□□□□ -1.06
DDX54-206ENST00000549271 Q6ZQT7 251 aa8.42□□□□□ -1.06
DDX54-206ENST00000549271 SSX7Q7RTT5 188 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms