RNA–Protein interactions for RNA: ENST00000549243.5

SLC48A1-207, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 577 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-207ENST00000549243 PYGO2Q9BRQ0 406 aa13.66□□□□□ -0.22
SLC48A1-207ENST00000549243 KRTAP17-1Q9BYP8 105 aa13.66□□□□□ -0.22
SLC48A1-207ENST00000549243 AGPAT4-IT1Q9H0P7 198 aa13.66□□□□□ -0.22
SLC48A1-207ENST00000549243 AAMDCQ9H7C9 122 aa13.66□□□□□ -0.22
SLC48A1-207ENST00000549243 PRELID1Q9Y255 219 aa13.66□□□□□ -0.22
SLC48A1-207ENST00000549243 LINC00588Q9Y4M8 146 aa13.66□□□□□ -0.22
SLC48A1-207ENST00000549243 IGKV2-40A0A087WW87 121 aaPredicted RBP13.65□□□□□ -0.22
SLC48A1-207ENST00000549243 A0A0J9YY99 117 aa13.65□□□□□ -0.22
SLC48A1-207ENST00000549243 IGKV2D-40P01614 121 aaPredicted RBP13.65□□□□□ -0.22
SLC48A1-207ENST00000549243 HOXA5P20719 270 aa13.65□□□□□ -0.22
SLC48A1-207ENST00000549243 H2BFSP57053 126 aa13.65□□□□□ -0.22
SLC48A1-207ENST00000549243 CYCSP99999 105 aaKnown RBP13.65□□□□□ -0.22
SLC48A1-207ENST00000549243 CD300CQ08708 224 aa13.65□□□□□ -0.22
SLC48A1-207ENST00000549243 BTN1A1Q13410 526 aa13.65□□□□□ -0.22
SLC48A1-207ENST00000549243 WDR61Q9GZS3 305 aaKnown RBP13.65□□□□□ -0.22
SLC48A1-207ENST00000549243 PTTG2Q9NZH5 202 aa13.65□□□□□ -0.22
SLC48A1-207ENST00000549243 MUC4Q99102 2169 aa13.64□□□□□ -0.23
SLC48A1-207ENST00000549243 OR10J4P0C629 311 aa13.64□□□□□ -0.23
SLC48A1-207ENST00000549243 RNASE4P34096 147 aaKnown RBP13.64□□□□□ -0.23
SLC48A1-207ENST00000549243 Q6ZTI0 123 aa13.64□□□□□ -0.23
SLC48A1-207ENST00000549243 PPP1R1CQ8WVI7 109 aa13.64□□□□□ -0.23
SLC48A1-207ENST00000549243 GNPNAT1Q96EK6 184 aaPredicted RBP13.64□□□□□ -0.23
SLC48A1-207ENST00000549243 LINC00477Q96M19 166 aa13.64□□□□□ -0.23
SLC48A1-207ENST00000549243 OR51M1Q9H341 326 aa13.64□□□□□ -0.23
SLC48A1-207ENST00000549243 GSN-AS1Q9NRJ2 163 aa13.64□□□□□ -0.23
SLC48A1-207ENST00000549243 NBDYA0A0U1RRE5 68 aa13.63□□□□□ -0.23
SLC48A1-207ENST00000549243 KLLNB2CW77 178 aa13.63□□□□□ -0.23
SLC48A1-207ENST00000549243 SSNA1O43805 119 aa13.63□□□□□ -0.23
SLC48A1-207ENST00000549243 NBEAP1P0C6P0 100 aa13.63□□□□□ -0.23
SLC48A1-207ENST00000549243 FAM19A4Q96LR4 140 aa13.63□□□□□ -0.23
SLC48A1-207ENST00000549243 VGLL1Q99990 258 aa13.63□□□□□ -0.23
SLC48A1-207ENST00000549243 PAXXQ9BUH6 204 aa13.63□□□□□ -0.23
SLC48A1-207ENST00000549243 TMPRSS5Q9H3S3 457 aa13.63□□□□□ -0.23
SLC48A1-207ENST00000549243 KCNIP2Q9NS61 270 aa13.63□□□□□ -0.23
SLC48A1-207ENST00000549243 GPX1P07203 203 aa13.62□□□□□ -0.23
SLC48A1-207ENST00000549243 M6PRP20645 277 aa13.62□□□□□ -0.23
SLC48A1-207ENST00000549243 TMEM78Q5T7P6 136 aa13.62□□□□□ -0.23
SLC48A1-207ENST00000549243 SSX7Q7RTT5 188 aa13.62□□□□□ -0.23
SLC48A1-207ENST00000549243 MARVELD1Q9BSK0 173 aa13.62□□□□□ -0.23
SLC48A1-207ENST00000549243 MRPL32Q9BYC8 188 aaKnown RBP13.62□□□□□ -0.23
SLC48A1-207ENST00000549243 FUT9Q9Y231 359 aa13.62□□□□□ -0.23
SLC48A1-207ENST00000549243 C17orf112F2Z3M2 114 aa13.61□□□□□ -0.23
SLC48A1-207ENST00000549243 OR7C2O60412 319 aa13.61□□□□□ -0.23
SLC48A1-207ENST00000549243 ZNF324O75467 553 aaPredicted RBP13.61□□□□□ -0.23
SLC48A1-207ENST00000549243 DAZ2Q13117 558 aaKnown RBP13.61□□□□□ -0.23
SLC48A1-207ENST00000549243 PRR9Q5T870 116 aa13.61□□□□□ -0.23
SLC48A1-207ENST00000549243 C9orf47Q6ZRZ4 202 aa13.61□□□□□ -0.23
SLC48A1-207ENST00000549243 C11orf72Q8NBR9 251 aa13.61□□□□□ -0.23
SLC48A1-207ENST00000549243 RXFP4Q8TDU9 374 aa13.61□□□□□ -0.23
SLC48A1-207ENST00000549243 FXYD5Q96DB9 178 aa13.61□□□□□ -0.23
SLC48A1-207ENST00000549243 PHYHIPLQ96FC7 376 aa13.61□□□□□ -0.23
SLC48A1-207ENST00000549243 ATP5SQ99766 215 aa13.61□□□□□ -0.23
SLC48A1-207ENST00000549243 SMIM3Q9BZL3 60 aa13.61□□□□□ -0.23
SLC48A1-207ENST00000549243 CRISP2P16562 243 aa13.6□□□□□ -0.23
SLC48A1-207ENST00000549243 Q6ZQT7 251 aa13.6□□□□□ -0.23
SLC48A1-207ENST00000549243 EIF4E3Q8N5X7 224 aaKnown RBP13.6□□□□□ -0.23
SLC48A1-207ENST00000549243 ZNF680Q8NEM1 530 aa13.6□□□□□ -0.23
SLC48A1-207ENST00000549243 DNAH11Q96DT5 4516 aa13.6□□□□□ -0.23
SLC48A1-207ENST00000549243 TRGV2A0A075B6R0 118 aa13.59□□□□□ -0.23
SLC48A1-207ENST00000549243 TRGV1A0A0A0MS02 117 aa13.59□□□□□ -0.23
SLC48A1-207ENST00000549243 MPC2O95563 127 aa13.59□□□□□ -0.23
SLC48A1-207ENST00000549243 DEFA1P59665 94 aa13.59□□□□□ -0.23
SLC48A1-207ENST00000549243 DEFA3P59666 94 aa13.59□□□□□ -0.23
SLC48A1-207ENST00000549243 FFAR4Q5NUL3 377 aa13.59□□□□□ -0.23
SLC48A1-207ENST00000549243 ZFAND2AQ8N6M9 145 aa13.59□□□□□ -0.23
SLC48A1-207ENST00000549243 Q8TAT8 98 aa13.59□□□□□ -0.23
SLC48A1-207ENST00000549243 KLF12Q9Y4X4 402 aa13.59□□□□□ -0.23
SLC48A1-207ENST00000549243 HSPB11Q9Y547 144 aa13.59□□□□□ -0.23
SLC48A1-207ENST00000549243 DYNC1H1Q14204 4646 aaKnown RBP13.59□□□□□ -0.23
SLC48A1-207ENST00000549243 RGS13O14921 159 aa13.58□□□□□ -0.24
SLC48A1-207ENST00000549243 EIF3GO75821 320 aaKnown RBP eCLIP13.58□□□□□ -0.24
SLC48A1-207ENST00000549243 MED14OSP0DP75 135 aa13.58□□□□□ -0.24
SLC48A1-207ENST00000549243 RANP62826 216 aaKnown RBP13.58□□□□□ -0.24
SLC48A1-207ENST00000549243 TNP2Q05952 138 aa13.58□□□□□ -0.24
SLC48A1-207ENST00000549243 ZNF575Q86XF7 245 aa13.58□□□□□ -0.24
SLC48A1-207ENST00000549243 C6orf223Q8N319 242 aa13.58□□□□□ -0.24
SLC48A1-207ENST00000549243 ZNF503Q96F45 646 aa13.58□□□□□ -0.24
SLC48A1-207ENST00000549243 LINC00467Q9BRT7 94 aa13.58□□□□□ -0.24
SLC48A1-207ENST00000549243 ZNF492Q9P255 531 aa13.58□□□□□ -0.24
SLC48A1-207ENST00000549243 TP53TG3Q9ULZ0 132 aa13.58□□□□□ -0.24
SLC48A1-207ENST00000549243 PET100P0DJ07 73 aa13.57□□□□□ -0.24
SLC48A1-207ENST00000549243 RPL12P30050 165 aaKnown RBP13.57□□□□□ -0.24
SLC48A1-207ENST00000549243 UBE2L3P68036 154 aaKnown RBP13.57□□□□□ -0.24
SLC48A1-207ENST00000549243 ANXA2RQ3ZCQ2 193 aa13.57□□□□□ -0.24
SLC48A1-207ENST00000549243 Q9H8V8 135 aa13.57□□□□□ -0.24
SLC48A1-207ENST00000549243 MBD2Q9UBB5 411 aa13.57□□□□□ -0.24
SLC48A1-207ENST00000549243 IFNA5P01569 189 aa13.56□□□□□ -0.24
SLC48A1-207ENST00000549243 ZNF138P52744 262 aa13.56□□□□□ -0.24
SLC48A1-207ENST00000549243 ESRGQ1W209 222 aa13.56□□□□□ -0.24
SLC48A1-207ENST00000549243 SCGB1C1Q8TD33 95 aa13.56□□□□□ -0.24
SLC48A1-207ENST00000549243 Q9H3A6 140 aa13.56□□□□□ -0.24
SLC48A1-207ENST00000549243 IGHV1OR15-1A0A075B7D0 117 aa13.55□□□□□ -0.24
SLC48A1-207ENST00000549243 NMBP08949 121 aa13.55□□□□□ -0.24
SLC48A1-207ENST00000549243 CSN1S1P47710 185 aa13.55□□□□□ -0.24
SLC48A1-207ENST00000549243 TCL1AP56279 114 aa13.55□□□□□ -0.24
SLC48A1-207ENST00000549243 VSIG2Q96IQ7 327 aa13.55□□□□□ -0.24
SLC48A1-207ENST00000549243 ARPC5LQ9BPX5 153 aa13.55□□□□□ -0.24
SLC48A1-207ENST00000549243 H3BNG1 76 aa13.54□□□□□ -0.24
SLC48A1-207ENST00000549243 KHDC3LQ587J8 217 aa13.54□□□□□ -0.24
SLC48A1-207ENST00000549243 WFDC1Q9HC57 220 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 141.1 ms