RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 SAA4P35542 130 aa11.16□□□□□ -0.62
CACNB3-209ENST00000548860 IL17RELQ6ZVW7 336 aa11.16□□□□□ -0.62
CACNB3-209ENST00000548860 SPATA12Q7Z6I5 190 aa11.16□□□□□ -0.62
CACNB3-209ENST00000548860 FN1P02751 2386 aaKnown RBP11.16□□□□□ -0.62
CACNB3-209ENST00000548860 ACANP16112 2415 aa11.16□□□□□ -0.62
CACNB3-209ENST00000548860 TEX22C9J3V5 150 aa11.16□□□□□ -0.62
CACNB3-209ENST00000548860 ATP6V0E1O15342 81 aa11.16□□□□□ -0.62
CACNB3-209ENST00000548860 CCL25O15444 150 aa11.16□□□□□ -0.62
CACNB3-209ENST00000548860 RIPPLY3P57055 190 aa11.16□□□□□ -0.62
CACNB3-209ENST00000548860 SCGB1D4Q6XE38 83 aa11.16□□□□□ -0.62
CACNB3-209ENST00000548860 THAP8Q8NA92 274 aa11.16□□□□□ -0.62
CACNB3-209ENST00000548860 IFI27L1Q96BM0 104 aa11.16□□□□□ -0.62
CACNB3-209ENST00000548860 SVEP1Q4LDE5 3571 aa11.16□□□□□ -0.62
CACNB3-209ENST00000548860 LINC01548A6NM66 108 aa11.15□□□□□ -0.62
CACNB3-209ENST00000548860 MYOZ3Q8TDC0 251 aa11.15□□□□□ -0.62
CACNB3-209ENST00000548860 CHODLQ9H9P2 273 aa11.15□□□□□ -0.62
CACNB3-209ENST00000548860 PTPRBP23467 1997 aa11.15□□□□□ -0.62
CACNB3-209ENST00000548860 JMJD1CQ15652 2540 aa11.15□□□□□ -0.62
CACNB3-209ENST00000548860 PRAC2D3DTV9 90 aa11.15□□□□□ -0.62
CACNB3-209ENST00000548860 H7C2G1 150 aa11.15□□□□□ -0.62
CACNB3-209ENST00000548860 NPYP01303 97 aa11.15□□□□□ -0.62
CACNB3-209ENST00000548860 SMIM17P0DL12 118 aa11.15□□□□□ -0.62
CACNB3-209ENST00000548860 PVRIGQ6DKI7 326 aa11.15□□□□□ -0.62
CACNB3-209ENST00000548860 PKD1L2Q7Z442 2459 aa11.15□□□□□ -0.62
CACNB3-209ENST00000548860 ATP5L2Q7Z4Y8 100 aa11.15□□□□□ -0.62
CACNB3-209ENST00000548860 DYNAPQ8N1N2 210 aa11.15□□□□□ -0.62
CACNB3-209ENST00000548860 PHLDA3Q9Y5J5 127 aa11.15□□□□□ -0.62
CACNB3-209ENST00000548860 TRAV30A0A087WSZ9 112 aa11.14□□□□□ -0.63
CACNB3-209ENST00000548860 FABP5P3A8MUU1 101 aa11.14□□□□□ -0.63
CACNB3-209ENST00000548860 EGR2P11161 476 aaPredicted RBP11.14□□□□□ -0.63
CACNB3-209ENST00000548860 RNASE4P34096 147 aaKnown RBP11.14□□□□□ -0.63
CACNB3-209ENST00000548860 PSG9Q00887 426 aa11.14□□□□□ -0.63
CACNB3-209ENST00000548860 MBD6Q96DN6 1003 aa11.14□□□□□ -0.63
CACNB3-209ENST00000548860 I3L2K1 104 aa11.14□□□□□ -0.63
CACNB3-209ENST00000548860 NEGR1Q7Z3B1 354 aa11.14□□□□□ -0.63
CACNB3-209ENST00000548860 LTAP01374 205 aa11.14□□□□□ -0.63
CACNB3-209ENST00000548860 IGLV1-47P01700 117 aa11.14□□□□□ -0.63
CACNB3-209ENST00000548860 SIGLEC8Q9NYZ4 499 aa11.14□□□□□ -0.63
CACNB3-209ENST00000548860 DKK2Q9UBU2 259 aa11.14□□□□□ -0.63
CACNB3-209ENST00000548860 F6UB75 175 aa11.13□□□□□ -0.63
CACNB3-209ENST00000548860 ATP5G2Q06055 141 aa11.13□□□□□ -0.63
CACNB3-209ENST00000548860 FAM231DQ6ZW35 169 aa11.13□□□□□ -0.63
CACNB3-209ENST00000548860 NHP2Q9NX24 153 aaKnown RBP11.13□□□□□ -0.63
CACNB3-209ENST00000548860 COX11Q9Y6N1 276 aa11.13□□□□□ -0.63
CACNB3-209ENST00000548860 ATP5J2P56134 94 aa11.13□□□□□ -0.63
CACNB3-209ENST00000548860 MRPL51Q4U2R6 128 aaKnown RBP11.13□□□□□ -0.63
CACNB3-209ENST00000548860 KLRB1Q12918 225 aa11.13□□□□□ -0.63
CACNB3-209ENST00000548860 HBDP02042 147 aa11.12□□□□□ -0.63
CACNB3-209ENST00000548860 PCP2Q8IVA1 136 aa11.12□□□□□ -0.63
CACNB3-209ENST00000548860 RNASE8Q8TDE3 154 aaKnown RBP11.12□□□□□ -0.63
CACNB3-209ENST00000548860 JMJD8Q96S16 334 aa11.12□□□□□ -0.63
CACNB3-209ENST00000548860 TMEM97Q5BJF2 176 aa11.12□□□□□ -0.63
CACNB3-209ENST00000548860 SIGLEC15Q6ZMC9 328 aa11.12□□□□□ -0.63
CACNB3-209ENST00000548860 LINC00311Q8N616 119 aa11.12□□□□□ -0.63
CACNB3-209ENST00000548860 CHCHD1Q96BP2 118 aaKnown RBP11.12□□□□□ -0.63
CACNB3-209ENST00000548860 RAI1Q7Z5J4 1906 aaPredicted RBP11.12□□□□□ -0.63
CACNB3-209ENST00000548860 ZFP36P26651 326 aaKnown RBP11.12□□□□□ -0.63
CACNB3-209ENST00000548860 SRSF9Q13242 221 aaKnown RBP eCLIP11.12□□□□□ -0.63
CACNB3-209ENST00000548860 WIPF2Q8TF74 440 aaPredicted RBP11.12□□□□□ -0.63
CACNB3-209ENST00000548860 SOX21Q9Y651 276 aaPredicted RBP11.12□□□□□ -0.63
CACNB3-209ENST00000548860 C11orf44Q8N8P7 122 aa11.11□□□□□ -0.63
CACNB3-209ENST00000548860 C2orf70A6NJV1 201 aa11.11□□□□□ -0.63
CACNB3-209ENST00000548860 K7ENP7 123 aa11.11□□□□□ -0.63
CACNB3-209ENST00000548860 C14orf178Q8N769 122 aaPredicted RBP11.11□□□□□ -0.63
CACNB3-209ENST00000548860 TMEM158Q8WZ71 300 aa11.11□□□□□ -0.63
CACNB3-209ENST00000548860 PRR25Q96S07 402 aa11.11□□□□□ -0.63
CACNB3-209ENST00000548860 HIST1H4GQ99525 98 aa11.11□□□□□ -0.63
CACNB3-209ENST00000548860 NCOR1P1Q9H4R4 102 aa11.11□□□□□ -0.63
CACNB3-209ENST00000548860 PSMB11A5LHX3 300 aa11.11□□□□□ -0.63
CACNB3-209ENST00000548860 A6NDN8 102 aa11.11□□□□□ -0.63
CACNB3-209ENST00000548860 PRTN3P24158 256 aa11.11□□□□□ -0.63
CACNB3-209ENST00000548860 EFNA4P52798 201 aa11.11□□□□□ -0.63
CACNB3-209ENST00000548860 UBE2V1Q13404 147 aa11.11□□□□□ -0.63
CACNB3-209ENST00000548860 ZNF562Q6V9R5 426 aa11.11□□□□□ -0.63
CACNB3-209ENST00000548860 TNFRSF14Q92956 283 aa11.11□□□□□ -0.63
CACNB3-209ENST00000548860 LINC00477Q96M19 166 aa11.11□□□□□ -0.63
CACNB3-209ENST00000548860 C7orf69Q9H7B7 122 aa11.11□□□□□ -0.63
CACNB3-209ENST00000548860 K7EP13 123 aa11.1□□□□□ -0.63
CACNB3-209ENST00000548860 GNLYP22749 145 aa11.1□□□□□ -0.63
CACNB3-209ENST00000548860 PET117Q6UWS5 81 aa11.1□□□□□ -0.63
CACNB3-209ENST00000548860 ST20Q9HBF5 79 aa11.1□□□□□ -0.63
CACNB3-209ENST00000548860 IGHV3-64A0A075B6Q5 118 aa11.1□□□□□ -0.63
CACNB3-209ENST00000548860 H3BRN7 92 aa11.1□□□□□ -0.63
CACNB3-209ENST00000548860 ZNF80P51504 273 aaPredicted RBP11.1□□□□□ -0.63
CACNB3-209ENST00000548860 OR10J6PQ8NGY7 276 aa11.1□□□□□ -0.63
CACNB3-209ENST00000548860 NRGNQ92686 78 aa11.1□□□□□ -0.63
CACNB3-209ENST00000548860 ZNF256Q9Y2P7 627 aaPredicted RBP11.1□□□□□ -0.63
CACNB3-209ENST00000548860 LOC107984156A0A0G2JMH3 177 aa11.09□□□□□ -0.63
CACNB3-209ENST00000548860 GAS8-AS1O95177 125 aa11.09□□□□□ -0.63
CACNB3-209ENST00000548860 FOXE3Q13461 319 aa11.09□□□□□ -0.63
CACNB3-209ENST00000548860 Q6ZQT7 251 aa11.09□□□□□ -0.63
CACNB3-209ENST00000548860 ARL17AQ8IVW1 177 aa11.09□□□□□ -0.63
CACNB3-209ENST00000548860 EEF1AKMT3Q96AZ1 226 aa11.09□□□□□ -0.63
CACNB3-209ENST00000548860 MEGF9Q9H1U4 602 aa11.09□□□□□ -0.63
CACNB3-209ENST00000548860 ZNF462Q96JM2 2506 aa11.09□□□□□ -0.63
CACNB3-209ENST00000548860 ZC2HC1BQ5TFG8 222 aa11.09□□□□□ -0.63
CACNB3-209ENST00000548860 KAAG1Q9UBP8 84 aa11.09□□□□□ -0.63
CACNB3-209ENST00000548860 K7ERJ3 54 aa11.09□□□□□ -0.63
CACNB3-209ENST00000548860 IGHV3OR16-12A0A075B7B8 117 aa11.08□□□□□ -0.64
CACNB3-209ENST00000548860 CRIP1P50238 77 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms