RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 ZC2HC1BQ5TFG8 222 aa18.02■□□□□ 0.48
NPAS3-206ENST00000548645 ZNF48Q96MX3 618 aaPredicted RBP18.02■□□□□ 0.48
NPAS3-206ENST00000548645 F8W1H4 67 aa18.02■□□□□ 0.47
NPAS3-206ENST00000548645 J3QR89 54 aa18.02■□□□□ 0.47
NPAS3-206ENST00000548645 E9PLD3 99 aa18.01■□□□□ 0.47
NPAS3-206ENST00000548645 LY6LH3BQJ8 138 aa18.01■□□□□ 0.47
NPAS3-206ENST00000548645 TIMM23O14925 209 aa18.01■□□□□ 0.47
NPAS3-206ENST00000548645 NBR2O15453 112 aa18.01■□□□□ 0.47
NPAS3-206ENST00000548645 TMEM158Q8WZ71 300 aa18.01■□□□□ 0.47
NPAS3-206ENST00000548645 PKDREJQ9NTG1 2253 aa18.01■□□□□ 0.47
NPAS3-206ENST00000548645 GAS8-AS1O95177 125 aa18.01■□□□□ 0.47
NPAS3-206ENST00000548645 AZU1P20160 251 aa18.01■□□□□ 0.47
NPAS3-206ENST00000548645 ZNF575Q86XF7 245 aa18.01■□□□□ 0.47
NPAS3-206ENST00000548645 LAMA5O15230 3695 aa18.01■□□□□ 0.47
NPAS3-206ENST00000548645 FABP5P3A8MUU1 101 aa18■□□□□ 0.47
NPAS3-206ENST00000548645 TMEM8BA6NDV4 472 aa18■□□□□ 0.47
NPAS3-206ENST00000548645 A0A0G2JNJ9 132 aa17.99■□□□□ 0.47
NPAS3-206ENST00000548645 FOXI2Q6ZQN5 318 aa17.99■□□□□ 0.47
NPAS3-206ENST00000548645 Q9UFV3 132 aa17.99■□□□□ 0.47
NPAS3-206ENST00000548645 Q8N8P6 123 aa17.99■□□□□ 0.47
NPAS3-206ENST00000548645 GTSF1LQ9H1H1 148 aa17.99■□□□□ 0.47
NPAS3-206ENST00000548645 ZGRF1Q86YA3 2104 aa17.99■□□□□ 0.47
NPAS3-206ENST00000548645 IGLL5B9A064 214 aa17.99■□□□□ 0.47
NPAS3-206ENST00000548645 TAL2Q16559 108 aa17.99■□□□□ 0.47
NPAS3-206ENST00000548645 CD300EQ496F6 205 aaPredicted RBP17.99■□□□□ 0.47
NPAS3-206ENST00000548645 IGLV11-55A0A075B6I3 123 aa17.98■□□□□ 0.47
NPAS3-206ENST00000548645 CLEC2AQ6UVW9 174 aa17.98■□□□□ 0.47
NPAS3-206ENST00000548645 FANCD2OSQ96PS1 177 aa17.98■□□□□ 0.47
NPAS3-206ENST00000548645 SPANXB1Q9NS25 103 aaPredicted RBP17.98■□□□□ 0.47
NPAS3-206ENST00000548645 TMEM160Q9NX00 188 aa17.98■□□□□ 0.47
NPAS3-206ENST00000548645 ZNF479Q96JC4 524 aa17.97■□□□□ 0.47
NPAS3-206ENST00000548645 C21orf62Q9NYP8 219 aa17.97■□□□□ 0.47
NPAS3-206ENST00000548645 TSSC4Q9Y5U2 329 aaPredicted RBP17.96■□□□□ 0.47
NPAS3-206ENST00000548645 TRAV40A0A0B4J280 105 aa17.96■□□□□ 0.47
NPAS3-206ENST00000548645 GAGE12HA6NDE8 117 aa17.96■□□□□ 0.47
NPAS3-206ENST00000548645 F8W735 103 aaPredicted RBP17.96■□□□□ 0.47
NPAS3-206ENST00000548645 WFDC2Q14508 124 aa17.96■□□□□ 0.47
NPAS3-206ENST00000548645 IGHG4P01861 327 aa17.95■□□□□ 0.46
NPAS3-206ENST00000548645 GATA1P15976 413 aaPredicted RBP17.95■□□□□ 0.46
NPAS3-206ENST00000548645 SMAGPQ0VAQ4 97 aa17.95■□□□□ 0.46
NPAS3-206ENST00000548645 IGFL4Q6B9Z1 124 aa17.95■□□□□ 0.46
NPAS3-206ENST00000548645 DTX2Q86UW9 622 aa17.95■□□□□ 0.46
NPAS3-206ENST00000548645 NPBQ8NG41 125 aa17.95■□□□□ 0.46
NPAS3-206ENST00000548645 MYOZ3Q8TDC0 251 aa17.95■□□□□ 0.46
NPAS3-206ENST00000548645 E7EQL1 145 aa17.95■□□□□ 0.46
NPAS3-206ENST00000548645 ZNF207O43670 478 aaKnown RBP17.95■□□□□ 0.46
NPAS3-206ENST00000548645 PSMG3-AS1Q96PY0 264 aa17.95■□□□□ 0.46
NPAS3-206ENST00000548645 SPAARA0A1B0GVQ0 90 aa17.95■□□□□ 0.46
NPAS3-206ENST00000548645 NDUFA3O95167 84 aa17.95■□□□□ 0.46
NPAS3-206ENST00000548645 DEFB124Q8NES8 71 aa17.95■□□□□ 0.46
NPAS3-206ENST00000548645 MRPL35Q9NZE8 188 aaKnown RBP17.95■□□□□ 0.46
NPAS3-206ENST00000548645 SMAD5-AS1Q9Y6J3 95 aa17.95■□□□□ 0.46
NPAS3-206ENST00000548645 SMG1Q96Q15 3661 aaKnown RBP17.94■□□□□ 0.46
NPAS3-206ENST00000548645 HLA-DMBP28068 263 aa17.94■□□□□ 0.46
NPAS3-206ENST00000548645 IGLV2-18A0A075B6J9 118 aa17.94■□□□□ 0.46
NPAS3-206ENST00000548645 SCGB2A1O75556 95 aa17.94■□□□□ 0.46
NPAS3-206ENST00000548645 GOSR1O95249 250 aa17.94■□□□□ 0.46
NPAS3-206ENST00000548645 C12orf74Q32Q52 190 aa17.94■□□□□ 0.46
NPAS3-206ENST00000548645 PIP4P1Q86T03 277 aa17.94■□□□□ 0.46
NPAS3-206ENST00000548645 TTC9CQ8N5M4 171 aa17.93■□□□□ 0.46
NPAS3-206ENST00000548645 ONECUT1Q9UBC0 465 aa17.93■□□□□ 0.46
NPAS3-206ENST00000548645 PRRG2O14669 202 aa17.92■□□□□ 0.46
NPAS3-206ENST00000548645 TCF15Q12870 199 aa17.92■□□□□ 0.46
NPAS3-206ENST00000548645 MAPKAPK5-AS1Q8N8E1 139 aa17.92■□□□□ 0.46
NPAS3-206ENST00000548645 DPM3Q9P2X0 92 aa17.92■□□□□ 0.46
NPAS3-206ENST00000548645 C5orf64Q2M2E5 130 aa17.92■□□□□ 0.46
NPAS3-206ENST00000548645 K7EMI3 77 aa17.92■□□□□ 0.46
NPAS3-206ENST00000548645 PPIFP30405 207 aaKnown RBP17.92■□□□□ 0.46
NPAS3-206ENST00000548645 LAGE3Q14657 143 aa17.92■□□□□ 0.46
NPAS3-206ENST00000548645 H3BMG7 143 aa17.91■□□□□ 0.46
NPAS3-206ENST00000548645 CFHR4Q92496 578 aa17.91■□□□□ 0.46
NPAS3-206ENST00000548645 LYNX1G3V0Z9 82 aa17.91■□□□□ 0.46
NPAS3-206ENST00000548645 LYNX1P0DP58 116 aa17.91■□□□□ 0.46
NPAS3-206ENST00000548645 DYNAPQ8N1N2 210 aa17.91■□□□□ 0.46
NPAS3-206ENST00000548645 IGFBPL1Q8WX77 278 aa17.91■□□□□ 0.46
NPAS3-206ENST00000548645 HIST1H4GQ99525 98 aa17.91■□□□□ 0.46
NPAS3-206ENST00000548645 A0A087WX48 190 aa17.9■□□□□ 0.46
NPAS3-206ENST00000548645 HES1Q14469 280 aa17.9■□□□□ 0.46
NPAS3-206ENST00000548645 ARPC1AQ92747 370 aa17.9■□□□□ 0.46
NPAS3-206ENST00000548645 SPATA25Q9BR10 227 aa17.9■□□□□ 0.46
NPAS3-206ENST00000548645 DCHS1Q96JQ0 3298 aa17.9■□□□□ 0.46
NPAS3-206ENST00000548645 IGHV3-23P01764 117 aa17.9■□□□□ 0.46
NPAS3-206ENST00000548645 ERCC8Q13216 396 aa17.9■□□□□ 0.46
NPAS3-206ENST00000548645 NCBP2LA6PVI3 153 aaKnown RBP17.89■□□□□ 0.46
NPAS3-206ENST00000548645 PLNP26678 52 aa17.89■□□□□ 0.46
NPAS3-206ENST00000548645 MAP1BP46821 2468 aaKnown RBP17.89■□□□□ 0.45
NPAS3-206ENST00000548645 PRSS47A8MTI9 375 aa17.89■□□□□ 0.45
NPAS3-206ENST00000548645 B9A039 149 aa17.89■□□□□ 0.45
NPAS3-206ENST00000548645 ETDBQ3ZM63 59 aa17.89■□□□□ 0.45
NPAS3-206ENST00000548645 ZNF502Q8TBZ5 544 aa17.89■□□□□ 0.45
NPAS3-206ENST00000548645 GAGE13Q4V321 117 aa17.88■□□□□ 0.45
NPAS3-206ENST00000548645 BOD1L1Q8NFC6 3051 aa17.88■□□□□ 0.45
NPAS3-206ENST00000548645 A0A1B0GV72 72 aa17.88■□□□□ 0.45
NPAS3-206ENST00000548645 NDUFS8O00217 210 aa17.88■□□□□ 0.45
NPAS3-206ENST00000548645 CTSGP08311 255 aa17.88■□□□□ 0.45
NPAS3-206ENST00000548645 SPAG8Q99932 426 aaPredicted RBP17.88■□□□□ 0.45
NPAS3-206ENST00000548645 RRN3P1Q2M238 152 aa17.88■□□□□ 0.45
NPAS3-206ENST00000548645 ZNF672Q499Z4 452 aaPredicted RBP17.88■□□□□ 0.45
NPAS3-206ENST00000548645 SH2D6Q7Z4S9 175 aa17.88■□□□□ 0.45
NPAS3-206ENST00000548645 RBAKDNA6NC62 111 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 278.3 ms