RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 ATP6V0BQ99437 205 aa11.96□□□□□ -0.49
BRF1-212ENST00000547562 MEGF9Q9H1U4 602 aa11.96□□□□□ -0.49
BRF1-212ENST00000547562 AP5S1Q9NUS5 200 aa11.96□□□□□ -0.49
BRF1-212ENST00000547562 OR4C46A6NHA9 309 aa11.96□□□□□ -0.5
BRF1-212ENST00000547562 NDUFS8O00217 210 aa11.96□□□□□ -0.5
BRF1-212ENST00000547562 IGLC6P0CF74 106 aa11.96□□□□□ -0.5
BRF1-212ENST00000547562 IGLL1P15814 213 aa11.96□□□□□ -0.5
BRF1-212ENST00000547562 ZNF575Q86XF7 245 aa11.96□□□□□ -0.5
BRF1-212ENST00000547562 LINC00527Q9UJ94 153 aa11.96□□□□□ -0.5
BRF1-212ENST00000547562 U3KQK5 164 aa11.96□□□□□ -0.5
BRF1-212ENST00000547562 MUC21A0A0G2JKD1 596 aa11.95□□□□□ -0.5
BRF1-212ENST00000547562 MUC21A0A140T8X8 626 aa11.95□□□□□ -0.5
BRF1-212ENST00000547562 FAM223BA6NKX1 122 aa11.95□□□□□ -0.5
BRF1-212ENST00000547562 D6R8Y8 96 aa11.95□□□□□ -0.5
BRF1-212ENST00000547562 HNRNPA3P51991 378 aaKnown RBP11.95□□□□□ -0.5
BRF1-212ENST00000547562 MUC21Q5SSG8 566 aa11.95□□□□□ -0.5
BRF1-212ENST00000547562 FAM223AQ8IWN6 122 aa11.95□□□□□ -0.5
BRF1-212ENST00000547562 AMN1Q8IY45 258 aa11.95□□□□□ -0.5
BRF1-212ENST00000547562 HSPB8Q9UJY1 196 aa11.95□□□□□ -0.5
BRF1-212ENST00000547562 U3KQE9 123 aa11.95□□□□□ -0.5
BRF1-212ENST00000547562 FABP5P3A8MUU1 101 aa11.95□□□□□ -0.5
BRF1-212ENST00000547562 ZNF207O43670 478 aaKnown RBP11.95□□□□□ -0.5
BRF1-212ENST00000547562 BATFQ16520 125 aa11.95□□□□□ -0.5
BRF1-212ENST00000547562 PRSS3P2Q8NHM4 247 aa11.95□□□□□ -0.5
BRF1-212ENST00000547562 MAP1LC3CQ9BXW4 147 aa11.95□□□□□ -0.5
BRF1-212ENST00000547562 SPG11Q96JI7 2443 aa11.94□□□□□ -0.5
BRF1-212ENST00000547562 FLNCQ14315 2725 aa11.94□□□□□ -0.5
BRF1-212ENST00000547562 IGHV3-49A0A0A0MS15 119 aa11.94□□□□□ -0.5
BRF1-212ENST00000547562 CLEC2AQ6UVW9 174 aa11.94□□□□□ -0.5
BRF1-212ENST00000547562 FA2HQ7L5A8 372 aa11.94□□□□□ -0.5
BRF1-212ENST00000547562 PPP1R14DQ9NXH3 145 aa11.94□□□□□ -0.5
BRF1-212ENST00000547562 DOPEY1Q5JWR5 2465 aa11.94□□□□□ -0.5
BRF1-212ENST00000547562 TRAV8-2A0A0B4J237 113 aa11.94□□□□□ -0.5
BRF1-212ENST00000547562 ORM1P02763 201 aa11.94□□□□□ -0.5
BRF1-212ENST00000547562 IGHV4-38-2P0DP08 117 aa11.94□□□□□ -0.5
BRF1-212ENST00000547562 ORMDL3Q8N138 153 aa11.94□□□□□ -0.5
BRF1-212ENST00000547562 PSMG3-AS1Q96PY0 264 aa11.94□□□□□ -0.5
BRF1-212ENST00000547562 IGSF10Q6WRI0 2623 aa11.93□□□□□ -0.5
BRF1-212ENST00000547562 TRGV3P03979 118 aa11.93□□□□□ -0.5
BRF1-212ENST00000547562 ATP5J2P56134 94 aa11.93□□□□□ -0.5
BRF1-212ENST00000547562 TWIST1Q15672 202 aa11.93□□□□□ -0.5
BRF1-212ENST00000547562 PET117Q6UWS5 81 aa11.93□□□□□ -0.5
BRF1-212ENST00000547562 IL17RELQ6ZVW7 336 aa11.93□□□□□ -0.5
BRF1-212ENST00000547562 PRELID3AQ96N28 172 aa11.93□□□□□ -0.5
BRF1-212ENST00000547562 TSPOP30536 169 aa11.92□□□□□ -0.5
BRF1-212ENST00000547562 IFI27P40305 119 aaPredicted RBP11.92□□□□□ -0.5
BRF1-212ENST00000547562 MRPL51Q4U2R6 128 aaKnown RBP11.92□□□□□ -0.5
BRF1-212ENST00000547562 C8orf86Q6ZUL3 223 aa11.92□□□□□ -0.5
BRF1-212ENST00000547562 TMEM191AQ9H0A3 160 aa11.92□□□□□ -0.5
BRF1-212ENST00000547562 IGHV4-30-2A0A087WSY4 118 aa11.92□□□□□ -0.5
BRF1-212ENST00000547562 IGF1P05019 195 aa11.92□□□□□ -0.5
BRF1-212ENST00000547562 ZNF25P17030 456 aaPredicted RBP11.92□□□□□ -0.5
BRF1-212ENST00000547562 LINC01559Q495D7 138 aa11.92□□□□□ -0.5
BRF1-212ENST00000547562 OR10AG1Q8NH19 301 aa11.92□□□□□ -0.5
BRF1-212ENST00000547562 MRPL53Q96EL3 112 aaKnown RBP11.92□□□□□ -0.5
BRF1-212ENST00000547562 CNFNQ9BYD5 112 aa11.92□□□□□ -0.5
BRF1-212ENST00000547562 AGPAT4-IT1Q9H0P7 198 aa11.92□□□□□ -0.5
BRF1-212ENST00000547562 LAMTOR2Q9Y2Q5 125 aa11.92□□□□□ -0.5
BRF1-212ENST00000547562 SIGLEC8Q9NYZ4 499 aa11.91□□□□□ -0.5
BRF1-212ENST00000547562 TIMM8BQ9Y5J9 83 aaPredicted RBP11.91□□□□□ -0.5
BRF1-212ENST00000547562 USP9XQ93008 2570 aaPredicted RBP11.91□□□□□ -0.5
BRF1-212ENST00000547562 ARL3P36405 182 aa11.91□□□□□ -0.5
BRF1-212ENST00000547562 LY6EQ16553 131 aa11.91□□□□□ -0.5
BRF1-212ENST00000547562 MRPS16Q9Y3D3 137 aaKnown RBP11.91□□□□□ -0.5
BRF1-212ENST00000547562 MAP1AP78559 2803 aaPredicted RBP11.91□□□□□ -0.5
BRF1-212ENST00000547562 FAM106AQ4KMX7 169 aa11.9□□□□□ -0.5
BRF1-212ENST00000547562 COL5A1-AS1Q5SY13 56 aa11.9□□□□□ -0.5
BRF1-212ENST00000547562 ZNF747Q9BV97 191 aa11.9□□□□□ -0.5
BRF1-212ENST00000547562 ST20Q9HBF5 79 aa11.9□□□□□ -0.5
BRF1-212ENST00000547562 LOC389332A0A1B0GUA5 103 aa11.9□□□□□ -0.5
BRF1-212ENST00000547562 H3BUX3 64 aa11.9□□□□□ -0.5
BRF1-212ENST00000547562 MSMBP08118 114 aa11.9□□□□□ -0.5
BRF1-212ENST00000547562 TMEM78Q5T7P6 136 aa11.9□□□□□ -0.5
BRF1-212ENST00000547562 HIF1ANQ9NWT6 349 aa11.9□□□□□ -0.5
BRF1-212ENST00000547562 A6NDX4 124 aa11.89□□□□□ -0.51
BRF1-212ENST00000547562 IGHG2P01859 326 aa11.89□□□□□ -0.51
BRF1-212ENST00000547562 MSRB1Q9NZV6 116 aa11.89□□□□□ -0.51
BRF1-212ENST00000547562 hDV102S1A0JD36 115 aa11.89□□□□□ -0.51
BRF1-212ENST00000547562 H0Y8G0 127 aa11.89□□□□□ -0.51
BRF1-212ENST00000547562 PPIFP30405 207 aaKnown RBP11.89□□□□□ -0.51
BRF1-212ENST00000547562 CKS2P33552 79 aa11.89□□□□□ -0.51
BRF1-212ENST00000547562 HIST1H1AQ02539 215 aaPredicted RBP11.89□□□□□ -0.51
BRF1-212ENST00000547562 LOXL1Q08397 574 aaPredicted RBP11.89□□□□□ -0.51
BRF1-212ENST00000547562 LINC01545Q5VT33 79 aa11.89□□□□□ -0.51
BRF1-212ENST00000547562 GLMPQ8WWB7 406 aa11.89□□□□□ -0.51
BRF1-212ENST00000547562 CELSR2Q9HCU4 2923 aa11.88□□□□□ -0.51
BRF1-212ENST00000547562 A0A096LNJ9 63 aa11.88□□□□□ -0.51
BRF1-212ENST00000547562 TMEM8BA6NDV4 472 aa11.88□□□□□ -0.51
BRF1-212ENST00000547562 BRI3O95415 125 aa11.88□□□□□ -0.51
BRF1-212ENST00000547562 TRBV12-3P01733 135 aa11.88□□□□□ -0.51
BRF1-212ENST00000547562 C9orf47Q6ZRZ4 202 aa11.88□□□□□ -0.51
BRF1-212ENST00000547562 MCRIP2Q9BUT9 160 aaKnown RBP11.88□□□□□ -0.51
BRF1-212ENST00000547562 SMKR1H3BMG3 65 aa11.88□□□□□ -0.51
BRF1-212ENST00000547562 H3BUA1 57 aa11.88□□□□□ -0.51
BRF1-212ENST00000547562 NPSP0C0P6 89 aa11.88□□□□□ -0.51
BRF1-212ENST00000547562 C16orf92Q96LL3 132 aa11.88□□□□□ -0.51
BRF1-212ENST00000547562 IGKV3D-20A0A0C4DH25 116 aa11.87□□□□□ -0.51
BRF1-212ENST00000547562 HSBP1L1C9JCN9 74 aa11.87□□□□□ -0.51
BRF1-212ENST00000547562 NDUFA4O00483 81 aa11.87□□□□□ -0.51
BRF1-212ENST00000547562 NPYP01303 97 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms