RNA–Protein interactions for RNA: ENST00000547065.1

VDR-204, Transcript of vitamin D receptor, humanhuman

TSL 2

Gene VDR, Length 1,782 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-204ENST00000547065 C16orf92Q96LL3 132 aa14.27□□□□□ -0.12
VDR-204ENST00000547065 PRO1933Q9H354 126 aa14.27□□□□□ -0.12
VDR-204ENST00000547065 SMAD7O15105 426 aaKnown RBP14.27□□□□□ -0.13
VDR-204ENST00000547065 PMCHP20382 165 aa14.27□□□□□ -0.13
VDR-204ENST00000547065 AGPAT4-IT1Q9H0P7 198 aa14.27□□□□□ -0.13
VDR-204ENST00000547065 TMSB15BA0A087X1C1 80 aa14.26□□□□□ -0.13
VDR-204ENST00000547065 ZNF705DP0CH99 300 aaPredicted RBP14.26□□□□□ -0.13
VDR-204ENST00000547065 ZNF705BP0CI00 300 aaPredicted RBP14.26□□□□□ -0.13
VDR-204ENST00000547065 LYZL1Q6UWQ5 148 aa14.26□□□□□ -0.13
VDR-204ENST00000547065 NIT1Q86X76 327 aa14.26□□□□□ -0.13
VDR-204ENST00000547065 TPPP3Q9BW30 176 aa14.26□□□□□ -0.13
VDR-204ENST00000547065 CD33P20138 364 aa14.25□□□□□ -0.13
VDR-204ENST00000547065 ZNF138P52744 262 aa14.25□□□□□ -0.13
VDR-204ENST00000547065 TMEM78Q5T7P6 136 aa14.25□□□□□ -0.13
VDR-204ENST00000547065 PRSS57Q6UWY2 283 aa14.25□□□□□ -0.13
VDR-204ENST00000547065 Q6YL49 198 aa14.25□□□□□ -0.13
VDR-204ENST00000547065 C9orf47Q6ZRZ4 202 aa14.25□□□□□ -0.13
VDR-204ENST00000547065 LCNL1Q6ZST4 164 aa14.25□□□□□ -0.13
VDR-204ENST00000547065 PPP1R14DQ9NXH3 145 aa14.25□□□□□ -0.13
VDR-204ENST00000547065 PEF1Q9UBV8 284 aaKnown RBP14.25□□□□□ -0.13
VDR-204ENST00000547065 LRRK2Q5S007 2527 aa14.25□□□□□ -0.13
VDR-204ENST00000547065 CRYBG3Q68DQ2 2970 aa14.25□□□□□ -0.13
VDR-204ENST00000547065 HSBP1O75506 76 aa14.24□□□□□ -0.13
VDR-204ENST00000547065 PSMB8P28062 276 aa14.24□□□□□ -0.13
VDR-204ENST00000547065 CTAG1AP78358 180 aa14.24□□□□□ -0.13
VDR-204ENST00000547065 ZNF493Q6ZR52 646 aa14.24□□□□□ -0.13
VDR-204ENST00000547065 VPREB3Q9UKI3 123 aa14.24□□□□□ -0.13
VDR-204ENST00000547065 DDTP30046 118 aa14.24□□□□□ -0.13
VDR-204ENST00000547065 PRR31Q5SQ13 230 aa14.24□□□□□ -0.13
VDR-204ENST00000547065 RNASEKQ6P5S7 137 aaKnown RBP14.24□□□□□ -0.13
VDR-204ENST00000547065 FAM19A2Q8N3H0 131 aa14.24□□□□□ -0.13
VDR-204ENST00000547065 FBN2P35556 2912 aa14.23□□□□□ -0.13
VDR-204ENST00000547065 CELSR2Q9HCU4 2923 aa14.23□□□□□ -0.13
VDR-204ENST00000547065 ORM1P02763 201 aa14.23□□□□□ -0.13
VDR-204ENST00000547065 NTF3P20783 257 aa14.23□□□□□ -0.13
VDR-204ENST00000547065 KRTDAPP60985 99 aa14.23□□□□□ -0.13
VDR-204ENST00000547065 TMEM95Q3KNT9 176 aa14.23□□□□□ -0.13
VDR-204ENST00000547065 FAM106AQ4KMX7 169 aa14.23□□□□□ -0.13
VDR-204ENST00000547065 IL17RELQ6ZVW7 336 aa14.23□□□□□ -0.13
VDR-204ENST00000547065 CHCHD1Q96BP2 118 aaKnown RBP14.23□□□□□ -0.13
VDR-204ENST00000547065 IGHV7-4-1A0A0J9YVY3 117 aa14.22□□□□□ -0.13
VDR-204ENST00000547065 K7EMT4 169 aa14.22□□□□□ -0.13
VDR-204ENST00000547065 HIST1H1AQ02539 215 aaPredicted RBP14.22□□□□□ -0.13
VDR-204ENST00000547065 DMRTA1Q5VZB9 504 aa14.22□□□□□ -0.13
VDR-204ENST00000547065 CYB5R2Q6BCY4 276 aa14.22□□□□□ -0.13
VDR-204ENST00000547065 FER1L6-AS1Q8NA97 138 aa14.22□□□□□ -0.13
VDR-204ENST00000547065 Q96MF0 132 aa14.22□□□□□ -0.13
VDR-204ENST00000547065 ANKRD17O75179 2603 aaKnown RBP14.22□□□□□ -0.13
VDR-204ENST00000547065 IGLC6P0CF74 106 aa14.22□□□□□ -0.13
VDR-204ENST00000547065 CTRLP40313 264 aa14.22□□□□□ -0.13
VDR-204ENST00000547065 LINC01559Q495D7 138 aa14.22□□□□□ -0.13
VDR-204ENST00000547065 MAP1AP78559 2803 aaPredicted RBP14.21□□□□□ -0.13
VDR-204ENST00000547065 M0R2Z0 102 aa14.21□□□□□ -0.13
VDR-204ENST00000547065 DEFA6Q01524 100 aa14.21□□□□□ -0.13
VDR-204ENST00000547065 TEX43Q6ZNM6 134 aa14.21□□□□□ -0.13
VDR-204ENST00000547065 ZNF575Q86XF7 245 aa14.21□□□□□ -0.13
VDR-204ENST00000547065 GPHB5Q86YW7 130 aa14.21□□□□□ -0.13
VDR-204ENST00000547065 URB1-AS1Q96HZ7 61 aa14.21□□□□□ -0.13
VDR-204ENST00000547065 DAZ1Q9NQZ3 744 aaKnown RBP14.21□□□□□ -0.13
VDR-204ENST00000547065 SOCS3O14543 225 aa14.2□□□□□ -0.14
VDR-204ENST00000547065 OVOL1O14753 267 aa14.2□□□□□ -0.14
VDR-204ENST00000547065 ZNF738Q8NE65 137 aa14.2□□□□□ -0.14
VDR-204ENST00000547065 C20orf173Q96LM9 149 aa14.2□□□□□ -0.14
VDR-204ENST00000547065 RHPN1-AS1Q9BWJ2 59 aa14.2□□□□□ -0.14
VDR-204ENST00000547065 SMPXQ9UHP9 88 aa14.2□□□□□ -0.14
VDR-204ENST00000547065 RNF114Q9Y508 228 aa14.2□□□□□ -0.14
VDR-204ENST00000547065 LENEPQ9Y5L5 61 aa14.2□□□□□ -0.14
VDR-204ENST00000547065 EPG5Q9HCE0 2579 aa14.19□□□□□ -0.14
VDR-204ENST00000547065 LINC00614P0C842 121 aa14.19□□□□□ -0.14
VDR-204ENST00000547065 TM4SF20Q53R12 229 aa14.19□□□□□ -0.14
VDR-204ENST00000547065 LINC00477Q96M19 166 aa14.19□□□□□ -0.14
VDR-204ENST00000547065 CELSR1Q9NYQ6 3014 aa14.19□□□□□ -0.14
VDR-204ENST00000547065 PSMG3-AS1Q96PY0 264 aa14.19□□□□□ -0.14
VDR-204ENST00000547065 CSPG4Q6UVK1 2322 aa14.18□□□□□ -0.14
VDR-204ENST00000547065 TMEM213A2RRL7 107 aa14.18□□□□□ -0.14
VDR-204ENST00000547065 C3orf79P0CE67 100 aa14.18□□□□□ -0.14
VDR-204ENST00000547065 RPL11P62913 178 aaKnown RBP14.18□□□□□ -0.14
VDR-204ENST00000547065 FAM104BQ5XKR9 115 aa14.18□□□□□ -0.14
VDR-204ENST00000547065 KRTAP1-3Q8IUG1 177 aa14.18□□□□□ -0.14
VDR-204ENST00000547065 Q8N976 141 aa14.18□□□□□ -0.14
VDR-204ENST00000547065 USP9YO00507 2555 aaPredicted RBP14.18□□□□□ -0.14
VDR-204ENST00000547065 RAB4AP20338 218 aa14.17□□□□□ -0.14
VDR-204ENST00000547065 FOXE3Q13461 319 aa14.17□□□□□ -0.14
VDR-204ENST00000547065 TWIST1Q15672 202 aa14.17□□□□□ -0.14
VDR-204ENST00000547065 REC114Q7Z4M0 266 aa14.17□□□□□ -0.14
VDR-204ENST00000547065 OR10J6PQ8NGY7 276 aa14.17□□□□□ -0.14
VDR-204ENST00000547065 UFC1Q9Y3C8 167 aa14.17□□□□□ -0.14
VDR-204ENST00000547065 U3KQK5 164 aa14.17□□□□□ -0.14
VDR-204ENST00000547065 FAM181BA6NEQ2 426 aa14.17□□□□□ -0.14
VDR-204ENST00000547065 HOXA3O43365 443 aaPredicted RBP14.17□□□□□ -0.14
VDR-204ENST00000547065 ELANEP08246 267 aa14.17□□□□□ -0.14
VDR-204ENST00000547065 CNFNQ9BYD5 112 aa14.17□□□□□ -0.14
VDR-204ENST00000547065 ZNF702PQ9H963 129 aa14.17□□□□□ -0.14
VDR-204ENST00000547065 ZFHX3Q15911 3703 aa14.16□□□□□ -0.14
VDR-204ENST00000547065 KIR2DL5BA0A0G2JN68 375 aa14.16□□□□□ -0.14
VDR-204ENST00000547065 KIR2DL5BA0A0G2JPC4 375 aa14.16□□□□□ -0.14
VDR-204ENST00000547065 SSTP61278 116 aa14.16□□□□□ -0.14
VDR-204ENST00000547065 C10orf99Q6UWK7 81 aa14.16□□□□□ -0.14
VDR-204ENST00000547065 KIR2DL5AQ8N109 375 aa14.16□□□□□ -0.14
VDR-204ENST00000547065 POLQO75417 2590 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms