RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 DIRC3C9JPN6 131 aa10.46□□□□□ -0.73
DDX54-203ENST00000546869 CRISP2P16562 243 aa10.46□□□□□ -0.73
DDX54-203ENST00000546869 LEPP41159 167 aa10.46□□□□□ -0.73
DDX54-203ENST00000546869 RAB5CP51148 216 aa10.46□□□□□ -0.73
DDX54-203ENST00000546869 CMTM2Q8TAZ6 248 aa10.46□□□□□ -0.73
DDX54-203ENST00000546869 NKX6-2Q9C056 277 aaPredicted RBP10.46□□□□□ -0.73
DDX54-203ENST00000546869 SERTM2A0A1B0GWG4 89 aa10.45□□□□□ -0.74
DDX54-203ENST00000546869 ERCC8Q13216 396 aa10.45□□□□□ -0.74
DDX54-203ENST00000546869 TMEM78Q5T7P6 136 aa10.45□□□□□ -0.74
DDX54-203ENST00000546869 VGLL1Q99990 258 aa10.45□□□□□ -0.74
DDX54-203ENST00000546869 ZNF492Q9P255 531 aa10.45□□□□□ -0.74
DDX54-203ENST00000546869 LENEPQ9Y5L5 61 aa10.45□□□□□ -0.74
DDX54-203ENST00000546869 IGHV4-28A0A0C4DH34 117 aa10.44□□□□□ -0.74
DDX54-203ENST00000546869 TMEM189A5PLL7 270 aa10.44□□□□□ -0.74
DDX54-203ENST00000546869 MAP1LC3B2A6NCE7 125 aa10.44□□□□□ -0.74
DDX54-203ENST00000546869 KLLNB2CW77 178 aa10.44□□□□□ -0.74
DDX54-203ENST00000546869 RBMY1A1P0DJD3 496 aaKnown RBP10.44□□□□□ -0.74
DDX54-203ENST00000546869 RBMY1CP0DJD4 496 aa10.44□□□□□ -0.74
DDX54-203ENST00000546869 PRB4P10163 310 aaPredicted RBP10.44□□□□□ -0.74
DDX54-203ENST00000546869 FHITP49789 147 aa10.44□□□□□ -0.74
DDX54-203ENST00000546869 ZNF138P52744 262 aa10.44□□□□□ -0.74
DDX54-203ENST00000546869 RBMY1FQ15415 496 aaKnown RBP10.44□□□□□ -0.74
DDX54-203ENST00000546869 C5orf17Q8NAS9 161 aa10.44□□□□□ -0.74
DDX54-203ENST00000546869 MAP1LC3BQ9GZQ8 125 aa10.44□□□□□ -0.74
DDX54-203ENST00000546869 ARL2-SNX15V9GYD0 113 aa10.44□□□□□ -0.74
DDX54-203ENST00000546869 TRAV12-2A0A075B6T6 113 aa10.43□□□□□ -0.74
DDX54-203ENST00000546869 IGKV2-40A0A087WW87 121 aaPredicted RBP10.43□□□□□ -0.74
DDX54-203ENST00000546869 H7BYZ3 331 aa10.43□□□□□ -0.74
DDX54-203ENST00000546869 IGKV2D-40P01614 121 aaPredicted RBP10.43□□□□□ -0.74
DDX54-203ENST00000546869 HBE1P02100 147 aa10.43□□□□□ -0.74
DDX54-203ENST00000546869 SUMO1P63165 101 aaKnown RBP10.43□□□□□ -0.74
DDX54-203ENST00000546869 TMPRSS5Q9H3S3 457 aa10.43□□□□□ -0.74
DDX54-203ENST00000546869 TRAV1-1A0A0B4J248 108 aa10.42□□□□□ -0.74
DDX54-203ENST00000546869 FBLL1A6NHQ2 334 aaKnown RBP10.42□□□□□ -0.74
DDX54-203ENST00000546869 H2AFB1P0C5Y9 115 aa10.42□□□□□ -0.74
DDX54-203ENST00000546869 SULT1A2P50226 295 aa10.42□□□□□ -0.74
DDX54-203ENST00000546869 TAS2R60P59551 318 aa10.42□□□□□ -0.74
DDX54-203ENST00000546869 RRN3P1Q2M238 152 aa10.42□□□□□ -0.74
DDX54-203ENST00000546869 GFI1BQ5VTD9 330 aa10.42□□□□□ -0.74
DDX54-203ENST00000546869 FAM213BQ8TBF2 198 aa10.42□□□□□ -0.74
DDX54-203ENST00000546869 SFT2D1Q8WV19 159 aa10.42□□□□□ -0.74
DDX54-203ENST00000546869 TMEM208Q9BTX3 173 aa10.42□□□□□ -0.74
DDX54-203ENST00000546869 EPDR1Q9UM22 224 aa10.42□□□□□ -0.74
DDX54-203ENST00000546869 IGHV3OR16-12A0A075B7B8 117 aa10.41□□□□□ -0.74
DDX54-203ENST00000546869 FAM74A7A6NL05 159 aa10.41□□□□□ -0.74
DDX54-203ENST00000546869 GGTLC3B5MD39 225 aa10.41□□□□□ -0.74
DDX54-203ENST00000546869 TCRAP04437 139 aa10.41□□□□□ -0.74
DDX54-203ENST00000546869 FGF8P55075 233 aaPredicted RBP10.41□□□□□ -0.74
DDX54-203ENST00000546869 KIR3DS1Q14943 382 aa10.41□□□□□ -0.74
DDX54-203ENST00000546869 ZFAND2AQ8N6M9 145 aa10.41□□□□□ -0.74
DDX54-203ENST00000546869 LINC01587Q99440 93 aa10.41□□□□□ -0.74
DDX54-203ENST00000546869 LINC00467Q9BRT7 94 aa10.41□□□□□ -0.74
DDX54-203ENST00000546869 TCEAL7Q9BRU2 100 aa10.41□□□□□ -0.74
DDX54-203ENST00000546869 C7orf71A4D174 169 aa10.4□□□□□ -0.74
DDX54-203ENST00000546869 K7EQM0 130 aa10.4□□□□□ -0.74
DDX54-203ENST00000546869 ZNF324O75467 553 aaPredicted RBP10.4□□□□□ -0.74
DDX54-203ENST00000546869 GPX1P07203 203 aa10.4□□□□□ -0.74
DDX54-203ENST00000546869 PPT1P50897 306 aa10.4□□□□□ -0.74
DDX54-203ENST00000546869 CASC10Q5T4H9 136 aa10.4□□□□□ -0.74
DDX54-203ENST00000546869 ZNF493Q6ZR52 646 aa10.4□□□□□ -0.74
DDX54-203ENST00000546869 GOLT1AQ6ZVE7 132 aa10.4□□□□□ -0.74
DDX54-203ENST00000546869 CCDC28AQ8IWP9 274 aa10.4□□□□□ -0.74
DDX54-203ENST00000546869 IQCF2Q8IXL9 164 aa10.4□□□□□ -0.74
DDX54-203ENST00000546869 C11orf45Q8TAV5 145 aa10.4□□□□□ -0.74
DDX54-203ENST00000546869 NIPSNAP3BQ9BS92 247 aa10.4□□□□□ -0.74
DDX54-203ENST00000546869 YTHDF2Q9Y5A9 579 aaKnown RBP10.4□□□□□ -0.74
DDX54-203ENST00000546869 TEX48A0A1B0GUV7 120 aa10.39□□□□□ -0.75
DDX54-203ENST00000546869 LOC102723971A0A1B0GUV8 181 aa10.39□□□□□ -0.75
DDX54-203ENST00000546869 DEFB4AO15263 64 aa10.39□□□□□ -0.75
DDX54-203ENST00000546869 HIST1H2BAQ96A08 127 aa10.39□□□□□ -0.75
DDX54-203ENST00000546869 PYGO2Q9BRQ0 406 aa10.39□□□□□ -0.75
DDX54-203ENST00000546869 ATG101Q9BSB4 218 aa10.39□□□□□ -0.75
DDX54-203ENST00000546869 CXorf65A6NEN9 183 aa10.38□□□□□ -0.75
DDX54-203ENST00000546869 SPART-AS1P0CW21 52 aa10.38□□□□□ -0.75
DDX54-203ENST00000546869 GNG5P63218 68 aa10.38□□□□□ -0.75
DDX54-203ENST00000546869 PMS2P11Q13670 270 aa10.38□□□□□ -0.75
DDX54-203ENST00000546869 CYB561D1Q8N8Q1 229 aa10.38□□□□□ -0.75
DDX54-203ENST00000546869 TMEM75Q8N9X5 138 aa10.38□□□□□ -0.75
DDX54-203ENST00000546869 TRAV12-3A0A0B4J271 114 aa10.37□□□□□ -0.75
DDX54-203ENST00000546869 ZNF705GA8MUZ8 300 aaPredicted RBP10.37□□□□□ -0.75
DDX54-203ENST00000546869 TEX46H3BTG2 121 aa10.37□□□□□ -0.75
DDX54-203ENST00000546869 IGLV2-11P01706 119 aa10.37□□□□□ -0.75
DDX54-203ENST00000546869 RNASE4P34096 147 aaKnown RBP10.37□□□□□ -0.75
DDX54-203ENST00000546869 UBE2G2P60604 165 aa10.37□□□□□ -0.75
DDX54-203ENST00000546869 Q6AWC8 147 aa10.37□□□□□ -0.75
DDX54-203ENST00000546869 Q8TAT8 98 aa10.37□□□□□ -0.75
DDX54-203ENST00000546869 C16orf74Q96GX8 76 aa10.37□□□□□ -0.75
DDX54-203ENST00000546869 RPH3ALQ9UNE2 315 aa10.37□□□□□ -0.75
DDX54-203ENST00000546869 DNAH7Q8WXX0 4024 aa10.36□□□□□ -0.75
DDX54-203ENST00000546869 PLAC8L1A1L4L8 177 aa10.36□□□□□ -0.75
DDX54-203ENST00000546869 C11orf94C9JXX5 98 aa10.36□□□□□ -0.75
DDX54-203ENST00000546869 F6UZH7 168 aa10.36□□□□□ -0.75
DDX54-203ENST00000546869 IFNA7P01567 189 aa10.36□□□□□ -0.75
DDX54-203ENST00000546869 AZU1P20160 251 aa10.36□□□□□ -0.75
DDX54-203ENST00000546869 NKX2-5P52952 324 aaPredicted RBP10.36□□□□□ -0.75
DDX54-203ENST00000546869 ANXA2RQ3ZCQ2 193 aa10.36□□□□□ -0.75
DDX54-203ENST00000546869 SAPCD1Q5SSQ6 148 aa10.36□□□□□ -0.75
DDX54-203ENST00000546869 PRR9Q5T870 116 aa10.36□□□□□ -0.75
DDX54-203ENST00000546869 RNASE8Q8TDE3 154 aaKnown RBP10.36□□□□□ -0.75
DDX54-203ENST00000546869 TMEM263Q8WUH6 116 aaKnown RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms