RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 TRGV2A0A075B6R0 118 aa9.74□□□□□ -0.85
NPC1L1-204ENST00000546276 ZNF688P0C7X2 276 aa9.74□□□□□ -0.85
NPC1L1-204ENST00000546276 FAM110DQ8TAY7 271 aaPredicted RBP9.74□□□□□ -0.85
NPC1L1-204ENST00000546276 A0A0U1RRA0 63 aa9.73□□□□□ -0.85
NPC1L1-204ENST00000546276 F8W1H4 67 aa9.73□□□□□ -0.85
NPC1L1-204ENST00000546276 FCN3O75636 299 aa9.73□□□□□ -0.85
NPC1L1-204ENST00000546276 LY6HO94772 140 aa9.73□□□□□ -0.85
NPC1L1-204ENST00000546276 IGLV2-14P01704 120 aa9.73□□□□□ -0.85
NPC1L1-204ENST00000546276 C2orf82Q6UX34 121 aa9.73□□□□□ -0.85
NPC1L1-204ENST00000546276 USMG5Q96IX5 58 aa9.73□□□□□ -0.85
NPC1L1-204ENST00000546276 TSSC4Q9Y5U2 329 aaPredicted RBP9.73□□□□□ -0.85
NPC1L1-204ENST00000546276 CDKN1BP46527 198 aa9.73□□□□□ -0.85
NPC1L1-204ENST00000546276 ETDBQ3ZM63 59 aa9.73□□□□□ -0.85
NPC1L1-204ENST00000546276 A0A087WWL8 130 aa9.72□□□□□ -0.85
NPC1L1-204ENST00000546276 IGHV2-70DA0A0C4DH43 119 aa9.72□□□□□ -0.85
NPC1L1-204ENST00000546276 NDUFS7O75251 213 aa9.72□□□□□ -0.85
NPC1L1-204ENST00000546276 IGF2BP2-AS1Q96M15 143 aa9.72□□□□□ -0.85
NPC1L1-204ENST00000546276 MRPL35Q9NZE8 188 aaKnown RBP9.72□□□□□ -0.85
NPC1L1-204ENST00000546276 MYMXA0A1B0GTQ4 84 aa9.72□□□□□ -0.85
NPC1L1-204ENST00000546276 RHPN1-AS1Q9BWJ2 59 aa9.72□□□□□ -0.85
NPC1L1-204ENST00000546276 NPC2P61916 151 aa9.72□□□□□ -0.85
NPC1L1-204ENST00000546276 C9JAW5 83 aa9.72□□□□□ -0.85
NPC1L1-204ENST00000546276 SLC25A16P16260 332 aa9.72□□□□□ -0.85
NPC1L1-204ENST00000546276 CEACAM8P31997 349 aaPredicted RBP9.71□□□□□ -0.85
NPC1L1-204ENST00000546276 FAM120AOSQ5T036 256 aa9.71□□□□□ -0.85
NPC1L1-204ENST00000546276 TP53TG1Q9Y2A0 90 aa9.71□□□□□ -0.85
NPC1L1-204ENST00000546276 SAA4P35542 130 aa9.71□□□□□ -0.85
NPC1L1-204ENST00000546276 TAL2Q16559 108 aa9.71□□□□□ -0.85
NPC1L1-204ENST00000546276 DTX2Q86UW9 622 aa9.71□□□□□ -0.85
NPC1L1-204ENST00000546276 STHQ8IWL8 128 aa9.71□□□□□ -0.85
NPC1L1-204ENST00000546276 DKK2Q9UBU2 259 aa9.71□□□□□ -0.85
NPC1L1-204ENST00000546276 ATP6V0E1O15342 81 aa9.71□□□□□ -0.86
NPC1L1-204ENST00000546276 CEND1Q8N111 149 aa9.71□□□□□ -0.86
NPC1L1-204ENST00000546276 ZNF491Q8N8L2 437 aa9.71□□□□□ -0.86
NPC1L1-204ENST00000546276 C8orf31Q8N9H6 132 aa9.71□□□□□ -0.86
NPC1L1-204ENST00000546276 IGHV3-73A0A0B4J1V6 119 aa9.71□□□□□ -0.86
NPC1L1-204ENST00000546276 TRBV20-1A0A075B6N2 111 aa9.7□□□□□ -0.86
NPC1L1-204ENST00000546276 H3BUX3 64 aa9.7□□□□□ -0.86
NPC1L1-204ENST00000546276 TIMM21Q9BVV7 248 aa9.7□□□□□ -0.86
NPC1L1-204ENST00000546276 TRAV26-2A0A0B4J265 109 aa9.7□□□□□ -0.86
NPC1L1-204ENST00000546276 BRD3OSQ6XYD6 125 aa9.7□□□□□ -0.86
NPC1L1-204ENST00000546276 ODF3L1Q8IXM7 274 aa9.7□□□□□ -0.86
NPC1L1-204ENST00000546276 TMEM141Q96I45 108 aa9.7□□□□□ -0.86
NPC1L1-204ENST00000546276 C17orf77Q96MU5 243 aa9.7□□□□□ -0.86
NPC1L1-204ENST00000546276 VGLL1Q99990 258 aa9.7□□□□□ -0.86
NPC1L1-204ENST00000546276 F8VRH5 84 aa9.7□□□□□ -0.86
NPC1L1-204ENST00000546276 MORN5Q5VZ52 161 aa9.7□□□□□ -0.86
NPC1L1-204ENST00000546276 K7ERJ3 54 aa9.69□□□□□ -0.86
NPC1L1-204ENST00000546276 SMIM2Q9BVW6 85 aa9.69□□□□□ -0.86
NPC1L1-204ENST00000546276 DAZ1Q9NQZ3 744 aaKnown RBP9.69□□□□□ -0.86
NPC1L1-204ENST00000546276 KAAG1Q9UBP8 84 aa9.69□□□□□ -0.86
NPC1L1-204ENST00000546276 HLA-DRB4P13762 266 aa9.69□□□□□ -0.86
NPC1L1-204ENST00000546276 PMVKQ15126 192 aa9.69□□□□□ -0.86
NPC1L1-204ENST00000546276 C8orf86Q6ZUL3 223 aa9.69□□□□□ -0.86
NPC1L1-204ENST00000546276 LINC00173Q6ZV60 143 aa9.69□□□□□ -0.86
NPC1L1-204ENST00000546276 HLA-DRB4X5D2U9 266 aa9.69□□□□□ -0.86
NPC1L1-204ENST00000546276 NBASA2RRP1 2371 aa9.69□□□□□ -0.86
NPC1L1-204ENST00000546276 ADARB2-AS1A8MUL3 147 aa9.69□□□□□ -0.86
NPC1L1-204ENST00000546276 IGFL3Q6UXB1 125 aa9.69□□□□□ -0.86
NPC1L1-204ENST00000546276 LY6G5BQ8NDX9 201 aa9.69□□□□□ -0.86
NPC1L1-204ENST00000546276 OR11H6Q8NGC7 330 aa9.69□□□□□ -0.86
NPC1L1-204ENST00000546276 PPDPFLQ8WWR9 84 aa9.69□□□□□ -0.86
NPC1L1-204ENST00000546276 PRADC1Q9BSG0 188 aa9.69□□□□□ -0.86
NPC1L1-204ENST00000546276 LHBP01229 141 aa9.68□□□□□ -0.86
NPC1L1-204ENST00000546276 CFAP161Q6P656 301 aa9.68□□□□□ -0.86
NPC1L1-204ENST00000546276 PATE2Q6UY27 113 aa9.68□□□□□ -0.86
NPC1L1-204ENST00000546276 FAM167A-AS1Q96KT0 104 aa9.68□□□□□ -0.86
NPC1L1-204ENST00000546276 SPXQ9BT56 116 aa9.68□□□□□ -0.86
NPC1L1-204ENST00000546276 FAM215AQ9Y5M1 114 aa9.68□□□□□ -0.86
NPC1L1-204ENST00000546276 NCOA6Q14686 2063 aaPredicted RBP9.68□□□□□ -0.86
NPC1L1-204ENST00000546276 GP9P14770 177 aa9.68□□□□□ -0.86
NPC1L1-204ENST00000546276 USF3Q68DE3 2245 aa9.68□□□□□ -0.86
NPC1L1-204ENST00000546276 EP400Q96L91 3159 aa9.68□□□□□ -0.86
NPC1L1-204ENST00000546276 ZNF415Q09FC8 603 aa9.68□□□□□ -0.86
NPC1L1-204ENST00000546276 LINC01545Q5VT33 79 aa9.68□□□□□ -0.86
NPC1L1-204ENST00000546276 CRIP3Q6Q6R5 217 aa9.68□□□□□ -0.86
NPC1L1-204ENST00000546276 TRPT1Q86TN4 253 aaKnown RBP9.68□□□□□ -0.86
NPC1L1-204ENST00000546276 RASL10AQ92737 203 aa9.68□□□□□ -0.86
NPC1L1-204ENST00000546276 OVOL3O00110 214 aa9.68□□□□□ -0.86
NPC1L1-204ENST00000546276 UBE2E1P51965 193 aa9.68□□□□□ -0.86
NPC1L1-204ENST00000546276 NEGR1Q7Z3B1 354 aa9.68□□□□□ -0.86
NPC1L1-204ENST00000546276 Q6ZPA2 131 aa9.67□□□□□ -0.86
NPC1L1-204ENST00000546276 KIAA1549LQ6ZVL6 1849 aa9.67□□□□□ -0.86
NPC1L1-204ENST00000546276 GAGE12HA6NDE8 117 aa9.67□□□□□ -0.86
NPC1L1-204ENST00000546276 FRMD6-AS1P0C7T7 363 aa9.67□□□□□ -0.86
NPC1L1-204ENST00000546276 PCP2Q8IVA1 136 aa9.67□□□□□ -0.86
NPC1L1-204ENST00000546276 SCRT2Q9NQ03 307 aa9.67□□□□□ -0.86
NPC1L1-204ENST00000546276 H3BMG7 143 aa9.67□□□□□ -0.86
NPC1L1-204ENST00000546276 SPRNQ5BIV9 151 aa9.67□□□□□ -0.86
NPC1L1-204ENST00000546276 YPEL4Q96NS1 127 aa9.67□□□□□ -0.86
NPC1L1-204ENST00000546276 G3V318 75 aa9.67□□□□□ -0.86
NPC1L1-204ENST00000546276 EGR2P11161 476 aaPredicted RBP9.67□□□□□ -0.86
NPC1L1-204ENST00000546276 KMT2EQ8IZD2 1858 aa9.67□□□□□ -0.86
NPC1L1-204ENST00000546276 PCNX1Q96RV3 2341 aa9.66□□□□□ -0.86
NPC1L1-204ENST00000546276 A0A087WX48 190 aa9.66□□□□□ -0.86
NPC1L1-204ENST00000546276 LINC00158P58513 81 aa9.66□□□□□ -0.86
NPC1L1-204ENST00000546276 RNASE8Q8TDE3 154 aaKnown RBP9.66□□□□□ -0.86
NPC1L1-204ENST00000546276 CREBBPQ92793 2442 aa9.66□□□□□ -0.86
NPC1L1-204ENST00000546276 MALRD1Q5VYJ5 2156 aa9.66□□□□□ -0.86
NPC1L1-204ENST00000546276 SPTAN1Q13813 2472 aaKnown RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms