RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 KIAA1549Q9HCM3 1950 aa6.94□□□□□ -1.3
CLIP1-218ENST00000545889 RAMP3O60896 148 aa6.94□□□□□ -1.3
CLIP1-218ENST00000545889 HBBP68871 147 aa6.94□□□□□ -1.3
CLIP1-218ENST00000545889 EFNB3Q15768 340 aa6.94□□□□□ -1.3
CLIP1-218ENST00000545889 Q6ZR03 302 aa6.94□□□□□ -1.3
CLIP1-218ENST00000545889 MYO15AQ9UKN7 3530 aa6.94□□□□□ -1.3
CLIP1-218ENST00000545889 IGKV1D-17A0A075B6S4 117 aa6.94□□□□□ -1.3
CLIP1-218ENST00000545889 hDV102S1A0JD36 115 aa6.94□□□□□ -1.3
CLIP1-218ENST00000545889 GHRHP01286 108 aa6.94□□□□□ -1.3
CLIP1-218ENST00000545889 ADORA2A-AS1P86434 159 aa6.94□□□□□ -1.3
CLIP1-218ENST00000545889 TFF3Q07654 80 aa6.94□□□□□ -1.3
CLIP1-218ENST00000545889 C18orf15Q96N68 181 aa6.94□□□□□ -1.3
CLIP1-218ENST00000545889 SLC25A39Q9BZJ4 359 aaPredicted RBP6.94□□□□□ -1.3
CLIP1-218ENST00000545889 DSPP15924 2871 aaKnown RBP6.94□□□□□ -1.3
CLIP1-218ENST00000545889 NCKAP5O14513 1909 aa6.94□□□□□ -1.3
CLIP1-218ENST00000545889 ADAMTS20P59510 1910 aa6.94□□□□□ -1.3
CLIP1-218ENST00000545889 IGKV1D-8A0A087WSZ0 117 aa6.94□□□□□ -1.3
CLIP1-218ENST00000545889 ZNF562Q6V9R5 426 aa6.94□□□□□ -1.3
CLIP1-218ENST00000545889 Q6AWC8 147 aa6.94□□□□□ -1.3
CLIP1-218ENST00000545889 C22orf34Q6ZV56 151 aa6.94□□□□□ -1.3
CLIP1-218ENST00000545889 HIST1H4GQ99525 98 aa6.94□□□□□ -1.3
CLIP1-218ENST00000545889 PTPRBP23467 1997 aa6.94□□□□□ -1.3
CLIP1-218ENST00000545889 IGHV3-73A0A0B4J1V6 119 aa6.93□□□□□ -1.3
CLIP1-218ENST00000545889 IGLC7A0M8Q6 106 aa6.93□□□□□ -1.3
CLIP1-218ENST00000545889 ATP6V0E1O15342 81 aa6.93□□□□□ -1.3
CLIP1-218ENST00000545889 DEFB112Q30KQ8 113 aa6.93□□□□□ -1.3
CLIP1-218ENST00000545889 TCTEX1D4Q5JR98 221 aa6.93□□□□□ -1.3
CLIP1-218ENST00000545889 FMC1Q96HJ9 113 aa6.93□□□□□ -1.3
CLIP1-218ENST00000545889 SCRT1Q9BWW7 348 aa6.93□□□□□ -1.3
CLIP1-218ENST00000545889 PSG8Q9UQ74 426 aa6.93□□□□□ -1.3
CLIP1-218ENST00000545889 IGLV1-44P01699 117 aa6.93□□□□□ -1.3
CLIP1-218ENST00000545889 ELANEP08246 267 aa6.93□□□□□ -1.3
CLIP1-218ENST00000545889 PMS2P5A8MQ11 134 aa6.93□□□□□ -1.3
CLIP1-218ENST00000545889 IGLL1P15814 213 aa6.93□□□□□ -1.3
CLIP1-218ENST00000545889 PRR31Q5SQ13 230 aa6.93□□□□□ -1.3
CLIP1-218ENST00000545889 TMEM86BQ8N661 226 aa6.93□□□□□ -1.3
CLIP1-218ENST00000545889 TMEM160Q9NX00 188 aa6.93□□□□□ -1.3
CLIP1-218ENST00000545889 F11RQ9Y624 299 aaKnown RBP6.93□□□□□ -1.3
CLIP1-218ENST00000545889 GAGE12HA6NDE8 117 aa6.92□□□□□ -1.3
CLIP1-218ENST00000545889 H0YJW9 148 aa6.92□□□□□ -1.3
CLIP1-218ENST00000545889 IGHV4-30-2A0A087WSY4 118 aa6.92□□□□□ -1.3
CLIP1-218ENST00000545889 NPIPB5A8MRT5 1133 aa6.92□□□□□ -1.3
CLIP1-218ENST00000545889 B5MCH6 92 aa6.92□□□□□ -1.3
CLIP1-218ENST00000545889 G3V318 75 aa6.92□□□□□ -1.3
CLIP1-218ENST00000545889 PYYP10082 97 aa6.92□□□□□ -1.3
CLIP1-218ENST00000545889 VPREB3Q9UKI3 123 aa6.92□□□□□ -1.3
CLIP1-218ENST00000545889 IGHV4-61A0A0C4DH41 118 aa6.92□□□□□ -1.3
CLIP1-218ENST00000545889 TP73-AS1Q9UF72 201 aa6.92□□□□□ -1.3
CLIP1-218ENST00000545889 RBMY1BA6NDE4 496 aaKnown RBP6.92□□□□□ -1.3
CLIP1-218ENST00000545889 RBMY1EA6NEQ0 496 aaKnown RBP6.92□□□□□ -1.3
CLIP1-218ENST00000545889 NAPSAO96009 420 aa6.92□□□□□ -1.3
CLIP1-218ENST00000545889 IGHV4-59P01825 116 aa6.92□□□□□ -1.3
CLIP1-218ENST00000545889 RBMY1DP0C7P1 496 aaKnown RBP6.92□□□□□ -1.3
CLIP1-218ENST00000545889 RBMY1A1P0DJD3 496 aaKnown RBP6.92□□□□□ -1.3
CLIP1-218ENST00000545889 RBMY1CP0DJD4 496 aa6.92□□□□□ -1.3
CLIP1-218ENST00000545889 TMEM95Q3KNT9 176 aa6.92□□□□□ -1.3
CLIP1-218ENST00000545889 ZNF876PQ49A33 203 aa6.92□□□□□ -1.3
CLIP1-218ENST00000545889 WDR86Q86TI4 376 aa6.92□□□□□ -1.3
CLIP1-218ENST00000545889 CYYR1Q96J86 154 aa6.92□□□□□ -1.3
CLIP1-218ENST00000545889 JPT2Q9H910 190 aa6.92□□□□□ -1.3
CLIP1-218ENST00000545889 FREM2Q5SZK8 3169 aa6.91□□□□□ -1.3
CLIP1-218ENST00000545889 G3V4G9 280 aa6.91□□□□□ -1.3
CLIP1-218ENST00000545889 ANXA2RQ3ZCQ2 193 aa6.91□□□□□ -1.3
CLIP1-218ENST00000545889 CD5LO43866 347 aa6.91□□□□□ -1.3
CLIP1-218ENST00000545889 CD28P10747 220 aa6.91□□□□□ -1.3
CLIP1-218ENST00000545889 ATP5G3P48201 142 aa6.91□□□□□ -1.3
CLIP1-218ENST00000545889 PGPEP1Q9NXJ5 209 aa6.91□□□□□ -1.3
CLIP1-218ENST00000545889 TAX1BP3O14907 124 aa6.91□□□□□ -1.3
CLIP1-218ENST00000545889 GNG5P63218 68 aa6.91□□□□□ -1.3
CLIP1-218ENST00000545889 OR5A1Q8NGJ0 315 aa6.91□□□□□ -1.3
CLIP1-218ENST00000545889 LINC00477Q96M19 166 aa6.91□□□□□ -1.3
CLIP1-218ENST00000545889 ARHGAP21Q5T5U3 1957 aa6.91□□□□□ -1.3
CLIP1-218ENST00000545889 PRB4P10163 310 aaPredicted RBP6.91□□□□□ -1.3
CLIP1-218ENST00000545889 ZNF138P52744 262 aa6.91□□□□□ -1.3
CLIP1-218ENST00000545889 ORMDL3Q8N138 153 aa6.91□□□□□ -1.3
CLIP1-218ENST00000545889 C1orf159Q96HA4 380 aa6.91□□□□□ -1.3
CLIP1-218ENST00000545889 RPP21Q9H633 154 aaKnown RBP6.91□□□□□ -1.3
CLIP1-218ENST00000545889 TEX48A0A1B0GUV7 120 aa6.9□□□□□ -1.3
CLIP1-218ENST00000545889 LHBP01229 141 aa6.9□□□□□ -1.3
CLIP1-218ENST00000545889 QRFPP83859 136 aa6.9□□□□□ -1.3
CLIP1-218ENST00000545889 FAM120AOSQ5T036 256 aa6.9□□□□□ -1.3
CLIP1-218ENST00000545889 BVES-AS1Q5T3Y7 98 aa6.9□□□□□ -1.3
CLIP1-218ENST00000545889 RMI2Q96E14 147 aa6.9□□□□□ -1.3
CLIP1-218ENST00000545889 FBLN5Q9UBX5 448 aa6.9□□□□□ -1.3
CLIP1-218ENST00000545889 EPDR1Q9UM22 224 aa6.9□□□□□ -1.3
CLIP1-218ENST00000545889 A0A0U1RRA0 63 aa6.9□□□□□ -1.3
CLIP1-218ENST00000545889 A0A1B0GWB2 263 aa6.9□□□□□ -1.3
CLIP1-218ENST00000545889 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.9□□□□□ -1.3
CLIP1-218ENST00000545889 SPINK8P0C7L1 97 aa6.9□□□□□ -1.3
CLIP1-218ENST00000545889 S100A7L2Q5SY68 101 aa6.9□□□□□ -1.3
CLIP1-218ENST00000545889 DLX4Q92988 240 aaPredicted RBP6.9□□□□□ -1.3
CLIP1-218ENST00000545889 C1orf147Q96MC9 270 aaPredicted RBP6.9□□□□□ -1.3
CLIP1-218ENST00000545889 CYSLTR1Q9Y271 337 aa6.9□□□□□ -1.3
CLIP1-218ENST00000545889 EXPH5Q8NEV8 1989 aa6.9□□□□□ -1.3
CLIP1-218ENST00000545889 CCL24O00175 119 aa6.9□□□□□ -1.31
CLIP1-218ENST00000545889 APOMO95445 188 aa6.9□□□□□ -1.31
CLIP1-218ENST00000545889 CFHR3Q02985 330 aa6.9□□□□□ -1.31
CLIP1-218ENST00000545889 SPRNQ5BIV9 151 aa6.9□□□□□ -1.31
CLIP1-218ENST00000545889 C9orf66Q5T8R8 295 aa6.9□□□□□ -1.31
CLIP1-218ENST00000545889 SHISA2Q6UWI4 295 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms