RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 IL18Q14116 193 aa9.78□□□□□ -0.84
RTN3-214ENST00000545432 ZNF546Q86UE3 836 aa9.78□□□□□ -0.84
RTN3-214ENST00000545432 ZFAND2AQ8N6M9 145 aa9.78□□□□□ -0.84
RTN3-214ENST00000545432 OR10G4Q8NGN3 311 aa9.78□□□□□ -0.84
RTN3-214ENST00000545432 DIRAS2Q96HU8 199 aa9.78□□□□□ -0.84
RTN3-214ENST00000545432 GGACTQ9BVM4 153 aa9.78□□□□□ -0.84
RTN3-214ENST00000545432 MCUBQ9NWR8 336 aa9.78□□□□□ -0.84
RTN3-214ENST00000545432 TRAV5A0A0B4J249 113 aa9.77□□□□□ -0.85
RTN3-214ENST00000545432 IGHV3-38A0A0C4DH36 116 aa9.77□□□□□ -0.85
RTN3-214ENST00000545432 E5RGE8 158 aa9.77□□□□□ -0.85
RTN3-214ENST00000545432 GOSR2O14653 212 aa9.77□□□□□ -0.85
RTN3-214ENST00000545432 AGPAT2O15120 278 aa9.77□□□□□ -0.85
RTN3-214ENST00000545432 PSCAO43653 123 aa9.77□□□□□ -0.85
RTN3-214ENST00000545432 HOXB5P09067 269 aa9.77□□□□□ -0.85
RTN3-214ENST00000545432 ERCC8Q13216 396 aa9.77□□□□□ -0.85
RTN3-214ENST00000545432 C9orf47Q6ZRZ4 202 aa9.77□□□□□ -0.85
RTN3-214ENST00000545432 RASL10AQ92737 203 aa9.77□□□□□ -0.85
RTN3-214ENST00000545432 RSL24D1Q9UHA3 163 aaKnown RBP9.77□□□□□ -0.85
RTN3-214ENST00000545432 RCL1Q9Y2P8 373 aaKnown RBP9.77□□□□□ -0.85
RTN3-214ENST00000545432 IGHV1OR15-1A0A075B7D0 117 aa9.76□□□□□ -0.85
RTN3-214ENST00000545432 M0R3E3 92 aa9.76□□□□□ -0.85
RTN3-214ENST00000545432 GYPEP15421 78 aa9.76□□□□□ -0.85
RTN3-214ENST00000545432 VAMP1P23763 118 aa9.76□□□□□ -0.85
RTN3-214ENST00000545432 RRAS2P62070 204 aaPredicted RBP9.76□□□□□ -0.85
RTN3-214ENST00000545432 PPP1R1AQ13522 171 aa9.76□□□□□ -0.85
RTN3-214ENST00000545432 C10orf113Q5VZT2 155 aa9.76□□□□□ -0.85
RTN3-214ENST00000545432 OR10P1Q8NGE3 313 aa9.76□□□□□ -0.85
RTN3-214ENST00000545432 ZNF479Q96JC4 524 aa9.76□□□□□ -0.85
RTN3-214ENST00000545432 SLC25A21Q9BQT8 299 aaPredicted RBP9.76□□□□□ -0.85
RTN3-214ENST00000545432 TXNDC17Q9BRA2 123 aa9.76□□□□□ -0.85
RTN3-214ENST00000545432 DNAJC4Q9NNZ3 241 aa9.76□□□□□ -0.85
RTN3-214ENST00000545432 CCDC59Q9P031 241 aaKnown RBP9.76□□□□□ -0.85
RTN3-214ENST00000545432 BOLA1Q9Y3E2 137 aa9.76□□□□□ -0.85
RTN3-214ENST00000545432 PKHD1L1Q86WI1 4243 aa9.75□□□□□ -0.85
RTN3-214ENST00000545432 NDUFB4O95168 129 aa9.75□□□□□ -0.85
RTN3-214ENST00000545432 METTL15P1P0C7V9 234 aa9.75□□□□□ -0.85
RTN3-214ENST00000545432 RNASE4P34096 147 aaKnown RBP9.75□□□□□ -0.85
RTN3-214ENST00000545432 TAS2R30P59541 319 aa9.75□□□□□ -0.85
RTN3-214ENST00000545432 ARL16Q0P5N6 197 aa9.75□□□□□ -0.85
RTN3-214ENST00000545432 Q6ZQT7 251 aa9.75□□□□□ -0.85
RTN3-214ENST00000545432 SH2D6Q7Z4S9 175 aa9.75□□□□□ -0.85
RTN3-214ENST00000545432 MGST2Q99735 147 aa9.75□□□□□ -0.85
RTN3-214ENST00000545432 PRELID1Q9Y255 219 aa9.75□□□□□ -0.85
RTN3-214ENST00000545432 TRBV19A0A075B6N1 114 aa9.74□□□□□ -0.85
RTN3-214ENST00000545432 TRGV4A0A0C4DH28 118 aa9.74□□□□□ -0.85
RTN3-214ENST00000545432 TRBV7-9A0A0J9YWB2 115 aa9.74□□□□□ -0.85
RTN3-214ENST00000545432 COX7A2P2O60397 106 aa9.74□□□□□ -0.85
RTN3-214ENST00000545432 TSC22D2O75157 780 aa9.74□□□□□ -0.85
RTN3-214ENST00000545432 PRR9Q5T870 116 aa9.74□□□□□ -0.85
RTN3-214ENST00000545432 MGAT4CQ9UBM8 478 aa9.74□□□□□ -0.85
RTN3-214ENST00000545432 RGS13O14921 159 aa9.73□□□□□ -0.85
RTN3-214ENST00000545432 GPX1P07203 203 aa9.73□□□□□ -0.85
RTN3-214ENST00000545432 SFTA3P0C7M3 94 aa9.73□□□□□ -0.85
RTN3-214ENST00000545432 UBE2MP61081 183 aaKnown RBP9.73□□□□□ -0.85
RTN3-214ENST00000545432 PDE6HQ13956 83 aa9.73□□□□□ -0.85
RTN3-214ENST00000545432 WFDC2Q14508 124 aa9.73□□□□□ -0.85
RTN3-214ENST00000545432 TDRG1Q3Y452 100 aa9.73□□□□□ -0.85
RTN3-214ENST00000545432 DEDD2Q8WXF8 326 aa9.73□□□□□ -0.85
RTN3-214ENST00000545432 TRIM63Q969Q1 353 aa9.73□□□□□ -0.85
RTN3-214ENST00000545432 TMEM14CQ9P0S9 112 aa9.73□□□□□ -0.85
RTN3-214ENST00000545432 C9JCJ5 164 aa9.72□□□□□ -0.85
RTN3-214ENST00000545432 FAUP35544 74 aaKnown RBP9.72□□□□□ -0.85
RTN3-214ENST00000545432 SPCS2Q15005 226 aa9.72□□□□□ -0.85
RTN3-214ENST00000545432 SCXQ7RTU7 201 aa9.72□□□□□ -0.85
RTN3-214ENST00000545432 BLNKQ8WV28 456 aa9.72□□□□□ -0.85
RTN3-214ENST00000545432 PCNPQ8WW12 178 aaKnown RBP9.72□□□□□ -0.85
RTN3-214ENST00000545432 ZNF492Q9P255 531 aa9.72□□□□□ -0.85
RTN3-214ENST00000545432 RNF213Q63HN8 5207 aa9.72□□□□□ -0.85
RTN3-214ENST00000545432 SSSCA1O60232 199 aa9.71□□□□□ -0.86
RTN3-214ENST00000545432 ASAH1Q13510 395 aa9.71□□□□□ -0.86
RTN3-214ENST00000545432 LAGE3Q14657 143 aa9.71□□□□□ -0.86
RTN3-214ENST00000545432 CHAC2Q8WUX2 184 aa9.71□□□□□ -0.86
RTN3-214ENST00000545432 SPXQ9BT56 116 aa9.71□□□□□ -0.86
RTN3-214ENST00000545432 C9orf170A2RU37 121 aa9.7□□□□□ -0.86
RTN3-214ENST00000545432 HIST1H1EP10412 219 aaKnown RBP9.7□□□□□ -0.86
RTN3-214ENST00000545432 Q6ZRG5 221 aa9.7□□□□□ -0.86
RTN3-214ENST00000545432 OR1L4Q8NGR5 311 aa9.7□□□□□ -0.86
RTN3-214ENST00000545432 DYNC2LI1Q8TCX1 351 aa9.7□□□□□ -0.86
RTN3-214ENST00000545432 ARPC5LQ9BPX5 153 aa9.7□□□□□ -0.86
RTN3-214ENST00000545432 CHAC1Q9BUX1 264 aa9.7□□□□□ -0.86
RTN3-214ENST00000545432 TM2D2Q9BX73 214 aa9.7□□□□□ -0.86
RTN3-214ENST00000545432 TRAV4A0A0B4J268 109 aa9.69□□□□□ -0.86
RTN3-214ENST00000545432 SMIM18P0DKX4 95 aa9.69□□□□□ -0.86
RTN3-214ENST00000545432 TNFSF8P32971 234 aa9.69□□□□□ -0.86
RTN3-214ENST00000545432 CAMLGP49069 296 aa9.69□□□□□ -0.86
RTN3-214ENST00000545432 AP3S2P59780 193 aa9.69□□□□□ -0.86
RTN3-214ENST00000545432 ZNF846Q147U1 533 aa9.69□□□□□ -0.86
RTN3-214ENST00000545432 MIC13Q5XKP0 118 aa9.69□□□□□ -0.86
RTN3-214ENST00000545432 C12orf45Q8N5I9 185 aaPredicted RBP9.69□□□□□ -0.86
RTN3-214ENST00000545432 RAB2BQ8WUD1 216 aa9.69□□□□□ -0.86
RTN3-214ENST00000545432 SRRQ9GZT4 340 aa9.69□□□□□ -0.86
RTN3-214ENST00000545432 SLC25A31Q9H0C2 315 aa9.69□□□□□ -0.86
RTN3-214ENST00000545432 LRP2P98164 4655 aa9.68□□□□□ -0.86
RTN3-214ENST00000545432 LOC100131303A0A0U1RQF7 123 aa9.68□□□□□ -0.86
RTN3-214ENST00000545432 C7orf66A4D0T2 115 aa9.68□□□□□ -0.86
RTN3-214ENST00000545432 FABP12A6NFH5 140 aa9.68□□□□□ -0.86
RTN3-214ENST00000545432 GATA1P15976 413 aaPredicted RBP9.68□□□□□ -0.86
RTN3-214ENST00000545432 RPL29P47914 159 aaKnown RBP9.68□□□□□ -0.86
RTN3-214ENST00000545432 ZNF266Q14584 549 aa9.68□□□□□ -0.86
RTN3-214ENST00000545432 TMEM78Q5T7P6 136 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms