RNA–Protein interactions for RNA: ENST00000545170.5

ATXN3-216, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 6,950 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-216ENST00000545170 PSPNO60542 156 aa6.91□□□□□ -1.3
ATXN3-216ENST00000545170 LINC00694P0DN24 101 aa6.91□□□□□ -1.3
ATXN3-216ENST00000545170 UBE2E2Q96LR5 201 aa6.91□□□□□ -1.3
ATXN3-216ENST00000545170 UPK3BQ9BT76 320 aa6.91□□□□□ -1.3
ATXN3-216ENST00000545170 Q9H8V8 135 aa6.91□□□□□ -1.3
ATXN3-216ENST00000545170 CNTRLQ7Z7A1 2325 aa6.91□□□□□ -1.3
ATXN3-216ENST00000545170 IGHV4-4A0A075B6R2 117 aa6.91□□□□□ -1.3
ATXN3-216ENST00000545170 LTBRP36941 435 aa6.91□□□□□ -1.3
ATXN3-216ENST00000545170 FAM120AOSQ5T036 256 aa6.91□□□□□ -1.3
ATXN3-216ENST00000545170 MRPL14Q6P1L8 145 aaKnown RBP6.91□□□□□ -1.3
ATXN3-216ENST00000545170 C1orf162Q8NEQ5 155 aaPredicted RBP6.91□□□□□ -1.3
ATXN3-216ENST00000545170 PRDM6Q9NQX0 595 aa6.91□□□□□ -1.3
ATXN3-216ENST00000545170 TMEM200BQ69YZ2 307 aa6.91□□□□□ -1.3
ATXN3-216ENST00000545170 TAF1LQ8IZX4 1826 aa6.91□□□□□ -1.3
ATXN3-216ENST00000545170 TRBV6-6A0A0A6YYG2 114 aa6.91□□□□□ -1.3
ATXN3-216ENST00000545170 TCL1BO95988 128 aa6.91□□□□□ -1.3
ATXN3-216ENST00000545170 FAM27E3Q08E93 113 aa6.91□□□□□ -1.3
ATXN3-216ENST00000545170 METRNQ9UJH8 293 aa6.91□□□□□ -1.3
ATXN3-216ENST00000545170 KLK9Q9UKQ9 250 aa6.91□□□□□ -1.3
ATXN3-216ENST00000545170 ITGB4P16144 1822 aa6.91□□□□□ -1.3
ATXN3-216ENST00000545170 ATP5J2P56134 94 aa6.9□□□□□ -1.3
ATXN3-216ENST00000545170 C20orf204Q6ZNR8 217 aa6.9□□□□□ -1.3
ATXN3-216ENST00000545170 SDIM1Q6ZPB5 146 aa6.9□□□□□ -1.3
ATXN3-216ENST00000545170 CD177Q8N6Q3 437 aa6.9□□□□□ -1.3
ATXN3-216ENST00000545170 E9PQ18 207 aa6.9□□□□□ -1.3
ATXN3-216ENST00000545170 EFNA2O43921 213 aa6.9□□□□□ -1.3
ATXN3-216ENST00000545170 WISP1O95388 367 aa6.9□□□□□ -1.3
ATXN3-216ENST00000545170 RPL35AP18077 110 aaKnown RBP6.9□□□□□ -1.3
ATXN3-216ENST00000545170 ARHGEF17Q96PE2 2063 aaPredicted RBP6.9□□□□□ -1.3
ATXN3-216ENST00000545170 LOXL1Q08397 574 aaPredicted RBP6.9□□□□□ -1.3
ATXN3-216ENST00000545170 Q6P435 159 aa6.9□□□□□ -1.3
ATXN3-216ENST00000545170 KLHL30-AS1Q8NEE0 82 aa6.9□□□□□ -1.3
ATXN3-216ENST00000545170 VSIG2Q96IQ7 327 aa6.9□□□□□ -1.3
ATXN3-216ENST00000545170 C5orf63A6NC05 138 aa6.9□□□□□ -1.31
ATXN3-216ENST00000545170 NREPQ16612 68 aa6.9□□□□□ -1.31
ATXN3-216ENST00000545170 LRRC75A-AS1Q8N1F1 130 aa6.9□□□□□ -1.31
ATXN3-216ENST00000545170 KNTC1P50748 2209 aa6.9□□□□□ -1.31
ATXN3-216ENST00000545170 PRR30Q53SZ7 412 aaPredicted RBP6.9□□□□□ -1.31
ATXN3-216ENST00000545170 C11orf52Q96A22 123 aa6.9□□□□□ -1.31
ATXN3-216ENST00000545170 Q6ZS49 121 aa6.89□□□□□ -1.31
ATXN3-216ENST00000545170 Q71RC1 249 aaPredicted RBP6.89□□□□□ -1.31
ATXN3-216ENST00000545170 C1orf210Q8IVY1 113 aa6.89□□□□□ -1.31
ATXN3-216ENST00000545170 DOCK4Q8N1I0 1966 aa6.89□□□□□ -1.31
ATXN3-216ENST00000545170 CENPVL3A0A0U1RRI6 287 aa6.89□□□□□ -1.31
ATXN3-216ENST00000545170 H3BT86 120 aa6.89□□□□□ -1.31
ATXN3-216ENST00000545170 HRCT1Q6UXD1 115 aa6.89□□□□□ -1.31
ATXN3-216ENST00000545170 TTTY13Q9BZ97 58 aa6.89□□□□□ -1.31
ATXN3-216ENST00000545170 CFHR3Q02985 330 aa6.89□□□□□ -1.31
ATXN3-216ENST00000545170 PRR25Q96S07 402 aa6.89□□□□□ -1.31
ATXN3-216ENST00000545170 LRRK1Q38SD2 2015 aa6.89□□□□□ -1.31
ATXN3-216ENST00000545170 SMIM9A6NGZ8 99 aa6.89□□□□□ -1.31
ATXN3-216ENST00000545170 ATG2BQ96BY7 2078 aa6.89□□□□□ -1.31
ATXN3-216ENST00000545170 KIF26BQ2KJY2 2108 aa6.89□□□□□ -1.31
ATXN3-216ENST00000545170 TMEM219Q86XT9 240 aa6.88□□□□□ -1.31
ATXN3-216ENST00000545170 Q8N1Y9 231 aa6.88□□□□□ -1.31
ATXN3-216ENST00000545170 SIGLEC9Q9Y336 463 aa6.88□□□□□ -1.31
ATXN3-216ENST00000545170 NDUFB8O95169 186 aa6.88□□□□□ -1.31
ATXN3-216ENST00000545170 RBAKDNA6NC62 111 aa6.88□□□□□ -1.31
ATXN3-216ENST00000545170 PATE3B3GLJ2 98 aa6.88□□□□□ -1.31
ATXN3-216ENST00000545170 H0YGX0 51 aa6.88□□□□□ -1.31
ATXN3-216ENST00000545170 SBF2Q86WG5 1849 aa6.88□□□□□ -1.31
ATXN3-216ENST00000545170 FXYD5Q96DB9 178 aa6.88□□□□□ -1.31
ATXN3-216ENST00000545170 THSD7AQ9UPZ6 1657 aa6.88□□□□□ -1.31
ATXN3-216ENST00000545170 IGHV1-8P0DP01 117 aa6.88□□□□□ -1.31
ATXN3-216ENST00000545170 SEC61GP60059 68 aa6.88□□□□□ -1.31
ATXN3-216ENST00000545170 FOXE3Q13461 319 aa6.88□□□□□ -1.31
ATXN3-216ENST00000545170 ATP1A1-AS1Q5TC04 95 aa6.88□□□□□ -1.31
ATXN3-216ENST00000545170 ZNRF2Q8NHG8 242 aa6.88□□□□□ -1.31
ATXN3-216ENST00000545170 PATJQ8NI35 1801 aa6.88□□□□□ -1.31
ATXN3-216ENST00000545170 PSCAO43653 123 aa6.87□□□□□ -1.31
ATXN3-216ENST00000545170 TIMM17BO60830 172 aa6.87□□□□□ -1.31
ATXN3-216ENST00000545170 ITGBL1O95965 494 aaPredicted RBP6.87□□□□□ -1.31
ATXN3-216ENST00000545170 PTPRDP23468 1912 aa6.87□□□□□ -1.31
ATXN3-216ENST00000545170 NYNRINQ9P2P1 1898 aaKnown RBP6.87□□□□□ -1.31
ATXN3-216ENST00000545170 SLC25A45Q8N413 288 aa6.87□□□□□ -1.31
ATXN3-216ENST00000545170 TMEM14BQ9NUH8 114 aa6.87□□□□□ -1.31
ATXN3-216ENST00000545170 CACNA1DQ01668 2161 aa6.87□□□□□ -1.31
ATXN3-216ENST00000545170 TEX49A0A1B0GTD5 131 aa6.87□□□□□ -1.31
ATXN3-216ENST00000545170 GATA1P15976 413 aaPredicted RBP6.87□□□□□ -1.31
ATXN3-216ENST00000545170 MDS2Q8NDY4 140 aa6.87□□□□□ -1.31
ATXN3-216ENST00000545170 C7orf69Q9H7B7 122 aa6.87□□□□□ -1.31
ATXN3-216ENST00000545170 IGKV1-16P04430 117 aa6.87□□□□□ -1.31
ATXN3-216ENST00000545170 VMO1Q7Z5L0 202 aa6.87□□□□□ -1.31
ATXN3-216ENST00000545170 IGHV1-18A0A0C4DH31 117 aa6.87□□□□□ -1.31
ATXN3-216ENST00000545170 PRSS22Q9GZN4 317 aa6.86□□□□□ -1.31
ATXN3-216ENST00000545170 SPINK13Q1W4C9 94 aa6.86□□□□□ -1.31
ATXN3-216ENST00000545170 DAND5Q8N907 189 aa6.86□□□□□ -1.31
ATXN3-216ENST00000545170 RHPN1-AS1Q9BWJ2 59 aa6.86□□□□□ -1.31
ATXN3-216ENST00000545170 COLQQ9Y215 455 aaPredicted RBP6.86□□□□□ -1.31
ATXN3-216ENST00000545170 LYNX1G3V0Z9 82 aa6.86□□□□□ -1.31
ATXN3-216ENST00000545170 JMJD7-PLA2G4BH0Y9G9 81 aa6.86□□□□□ -1.31
ATXN3-216ENST00000545170 IGHV1-46P01743 117 aa6.86□□□□□ -1.31
ATXN3-216ENST00000545170 LYNX1P0DP58 116 aa6.86□□□□□ -1.31
ATXN3-216ENST00000545170 COX6B1P14854 86 aa6.86□□□□□ -1.31
ATXN3-216ENST00000545170 CLPSL2Q6UWE3 100 aa6.86□□□□□ -1.31
ATXN3-216ENST00000545170 VOPP1Q96AW1 172 aa6.86□□□□□ -1.31
ATXN3-216ENST00000545170 TMEM14CQ9P0S9 112 aa6.86□□□□□ -1.31
ATXN3-216ENST00000545170 GLI3P10071 1580 aa6.86□□□□□ -1.31
ATXN3-216ENST00000545170 H3BRN7 92 aa6.86□□□□□ -1.31
ATXN3-216ENST00000545170 ELANEP08246 267 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms