RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 CD81P60033 236 aa4.93□□□□□ -1.62
CDCA3-209ENST00000544610 PAFAH1B2P68402 229 aa4.93□□□□□ -1.62
CDCA3-209ENST00000544610 SRSF3P84103 164 aaKnown RBP4.93□□□□□ -1.62
CDCA3-209ENST00000544610 DEFA5Q01523 94 aa4.93□□□□□ -1.62
CDCA3-209ENST00000544610 PNRC1Q12796 327 aaPredicted RBP4.93□□□□□ -1.62
CDCA3-209ENST00000544610 ICAM4Q14773 271 aa4.93□□□□□ -1.62
CDCA3-209ENST00000544610 C20orf24Q9BUV8 137 aa4.93□□□□□ -1.62
CDCA3-209ENST00000544610 RHPN1-AS1Q9BWJ2 59 aa4.93□□□□□ -1.62
CDCA3-209ENST00000544610 NRN1Q9NPD7 142 aa4.93□□□□□ -1.62
CDCA3-209ENST00000544610 ZNF331Q9NQX6 463 aaPredicted RBP4.93□□□□□ -1.62
CDCA3-209ENST00000544610 ZNF586Q9NXT0 402 aa4.93□□□□□ -1.62
CDCA3-209ENST00000544610 CARHSP1Q9Y2V2 147 aaKnown RBP4.93□□□□□ -1.62
CDCA3-209ENST00000544610 TRAV5A0A0B4J249 113 aa4.92□□□□□ -1.62
CDCA3-209ENST00000544610 GGTLC3B5MD39 225 aa4.92□□□□□ -1.62
CDCA3-209ENST00000544610 C9JCJ5 164 aa4.92□□□□□ -1.62
CDCA3-209ENST00000544610 H3BQ15 152 aa4.92□□□□□ -1.62
CDCA3-209ENST00000544610 NDUFB4O95168 129 aa4.92□□□□□ -1.62
CDCA3-209ENST00000544610 SRP19P09132 144 aaKnown RBP4.92□□□□□ -1.62
CDCA3-209ENST00000544610 PYYP10082 97 aa4.92□□□□□ -1.62
CDCA3-209ENST00000544610 FOLR2P14207 255 aa4.92□□□□□ -1.62
CDCA3-209ENST00000544610 ID1P41134 155 aa4.92□□□□□ -1.62
CDCA3-209ENST00000544610 CSN1S1P47710 185 aa4.92□□□□□ -1.62
CDCA3-209ENST00000544610 FGF8P55075 233 aaPredicted RBP4.92□□□□□ -1.62
CDCA3-209ENST00000544610 GAGE13Q4V321 117 aa4.92□□□□□ -1.62
CDCA3-209ENST00000544610 SOHLH1Q5JUK2 328 aa4.92□□□□□ -1.62
CDCA3-209ENST00000544610 ADAMTSL5Q6ZMM2 481 aa4.92□□□□□ -1.62
CDCA3-209ENST00000544610 COX8CQ7Z4L0 72 aa4.92□□□□□ -1.62
CDCA3-209ENST00000544610 NUDT10Q8NFP7 164 aa4.92□□□□□ -1.62
CDCA3-209ENST00000544610 CMTM2Q8TAZ6 248 aa4.92□□□□□ -1.62
CDCA3-209ENST00000544610 NUDT11Q96G61 164 aa4.92□□□□□ -1.62
CDCA3-209ENST00000544610 SPAG8Q99932 426 aaPredicted RBP4.92□□□□□ -1.62
CDCA3-209ENST00000544610 ATG101Q9BSB4 218 aa4.92□□□□□ -1.62
CDCA3-209ENST00000544610 BIN3Q9NQY0 253 aa4.92□□□□□ -1.62
CDCA3-209ENST00000544610 EPDR1Q9UM22 224 aa4.92□□□□□ -1.62
CDCA3-209ENST00000544610 LENEPQ9Y5L5 61 aa4.92□□□□□ -1.62
CDCA3-209ENST00000544610 IGHV3-35A0A0C4DH35 117 aa4.91□□□□□ -1.62
CDCA3-209ENST00000544610 B4DEV8 164 aa4.91□□□□□ -1.62
CDCA3-209ENST00000544610 SOCS3O14543 225 aa4.91□□□□□ -1.62
CDCA3-209ENST00000544610 IGLV1-51P01701 117 aa4.91□□□□□ -1.62
CDCA3-209ENST00000544610 CSN3P07498 182 aa4.91□□□□□ -1.62
CDCA3-209ENST00000544610 OR10J4P0C629 311 aa4.91□□□□□ -1.62
CDCA3-209ENST00000544610 PTTG1IPP53801 180 aa4.91□□□□□ -1.62
CDCA3-209ENST00000544610 SNRPD3P62318 126 aaKnown RBP4.91□□□□□ -1.62
CDCA3-209ENST00000544610 HAGHQ16775 308 aa4.91□□□□□ -1.62
CDCA3-209ENST00000544610 TMEM183BQ1AE95 376 aa4.91□□□□□ -1.62
CDCA3-209ENST00000544610 LCE5AQ5TCM9 118 aa4.91□□□□□ -1.62
CDCA3-209ENST00000544610 CST9LP1Q5W188 147 aa4.91□□□□□ -1.62
CDCA3-209ENST00000544610 LEMD1Q68G75 181 aa4.91□□□□□ -1.62
CDCA3-209ENST00000544610 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.91□□□□□ -1.62
CDCA3-209ENST00000544610 IQCF2Q8IXL9 164 aa4.91□□□□□ -1.62
CDCA3-209ENST00000544610 CYB561D1Q8N8Q1 229 aa4.91□□□□□ -1.62
CDCA3-209ENST00000544610 TMEM75Q8N9X5 138 aa4.91□□□□□ -1.62
CDCA3-209ENST00000544610 C2CD4CQ8TF44 421 aa4.91□□□□□ -1.62
CDCA3-209ENST00000544610 DCANP1Q8TF63 244 aa4.91□□□□□ -1.62
CDCA3-209ENST00000544610 FMC1Q96HJ9 113 aa4.91□□□□□ -1.62
CDCA3-209ENST00000544610 SPATA25Q9BR10 227 aa4.91□□□□□ -1.62
CDCA3-209ENST00000544610 Q9H3A6 140 aa4.91□□□□□ -1.62
CDCA3-209ENST00000544610 TMPRSS5Q9H3S3 457 aa4.91□□□□□ -1.62
CDCA3-209ENST00000544610 TREM1Q9NP99 234 aa4.91□□□□□ -1.62
CDCA3-209ENST00000544610 ZFP30Q9Y2G7 519 aa4.91□□□□□ -1.62
CDCA3-209ENST00000544610 YTHDF2Q9Y5A9 579 aaKnown RBP4.91□□□□□ -1.62
CDCA3-209ENST00000544610 HERC2O95714 4834 aa4.9□□□□□ -1.62
CDCA3-209ENST00000544610 PGPA6NDG6 321 aa4.9□□□□□ -1.63
CDCA3-209ENST00000544610 OR4C46A6NHA9 309 aa4.9□□□□□ -1.63
CDCA3-209ENST00000544610 B5MCH6 92 aa4.9□□□□□ -1.63
CDCA3-209ENST00000544610 PEX7O00628 323 aa4.9□□□□□ -1.63
CDCA3-209ENST00000544610 APOHP02749 345 aaPredicted RBP4.9□□□□□ -1.63
CDCA3-209ENST00000544610 TCRAP04437 139 aa4.9□□□□□ -1.63
CDCA3-209ENST00000544610 SFTA3P0C7M3 94 aa4.9□□□□□ -1.63
CDCA3-209ENST00000544610 CNN1P51911 297 aaKnown RBP4.9□□□□□ -1.63
CDCA3-209ENST00000544610 RANP62826 216 aaKnown RBP4.9□□□□□ -1.63
CDCA3-209ENST00000544610 PSG3Q16557 428 aa4.9□□□□□ -1.63
CDCA3-209ENST00000544610 DEFB114Q30KQ6 69 aa4.9□□□□□ -1.63
CDCA3-209ENST00000544610 SAPCD1Q5SSQ6 148 aa4.9□□□□□ -1.63
CDCA3-209ENST00000544610 TCF24Q7RTU0 167 aa4.9□□□□□ -1.63
CDCA3-209ENST00000544610 SVBPQ8N300 66 aa4.9□□□□□ -1.63
CDCA3-209ENST00000544610 PCNPQ8WW12 178 aaKnown RBP4.9□□□□□ -1.63
CDCA3-209ENST00000544610 C17orf77Q96MU5 243 aa4.9□□□□□ -1.63
CDCA3-209ENST00000544610 ODF3Q96PU9 254 aa4.9□□□□□ -1.63
CDCA3-209ENST00000544610 RARRES2Q99969 163 aa4.9□□□□□ -1.63
CDCA3-209ENST00000544610 NIPSNAP3BQ9BS92 247 aa4.9□□□□□ -1.63
CDCA3-209ENST00000544610 TMEM242Q9NWH2 141 aa4.9□□□□□ -1.63
CDCA3-209ENST00000544610 SORL1Q92673 2214 aa4.89□□□□□ -1.63
CDCA3-209ENST00000544610 FRAS1Q86XX4 4008 aa4.89□□□□□ -1.63
CDCA3-209ENST00000544610 DIRC3C9JPN6 131 aa4.89□□□□□ -1.63
CDCA3-209ENST00000544610 K7EQG2 157 aa4.89□□□□□ -1.63
CDCA3-209ENST00000544610 ATP6V1G1O75348 118 aa4.89□□□□□ -1.63
CDCA3-209ENST00000544610 ATP5G3P48201 142 aa4.89□□□□□ -1.63
CDCA3-209ENST00000544610 TMEM241Q24JQ0 296 aa4.89□□□□□ -1.63
CDCA3-209ENST00000544610 LCN12Q6JVE5 192 aa4.89□□□□□ -1.63
CDCA3-209ENST00000544610 RBPMS2Q6ZRY4 209 aaKnown RBP4.89□□□□□ -1.63
CDCA3-209ENST00000544610 C9orf47Q6ZRZ4 202 aa4.89□□□□□ -1.63
CDCA3-209ENST00000544610 SLC7A5P1Q8MH63 180 aa4.89□□□□□ -1.63
CDCA3-209ENST00000544610 DYNLRB2Q8TF09 96 aa4.89□□□□□ -1.63
CDCA3-209ENST00000544610 BLNKQ8WV28 456 aa4.89□□□□□ -1.63
CDCA3-209ENST00000544610 LINC00477Q96M19 166 aa4.89□□□□□ -1.63
CDCA3-209ENST00000544610 SMIM7Q9BQ49 75 aa4.89□□□□□ -1.63
CDCA3-209ENST00000544610 MS4A6AQ9H2W1 248 aa4.89□□□□□ -1.63
CDCA3-209ENST00000544610 PARLQ9H300 379 aa4.89□□□□□ -1.63
CDCA3-209ENST00000544610 NAT8Q9UHE5 227 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms