RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 LINC01619G3V211 115 aa10.21□□□□□ -0.77
CHD4-211ENST00000544484 IGLV3-1P01715 115 aa10.21□□□□□ -0.77
CHD4-211ENST00000544484 C8orf86Q6ZUL3 223 aa10.21□□□□□ -0.77
CHD4-211ENST00000544484 TMEM238C9JI98 176 aa10.21□□□□□ -0.77
CHD4-211ENST00000544484 C1orf194Q5T5A4 169 aa10.21□□□□□ -0.77
CHD4-211ENST00000544484 GATD1Q8NB37 220 aa10.21□□□□□ -0.77
CHD4-211ENST00000544484 JPT2Q9H910 190 aa10.21□□□□□ -0.77
CHD4-211ENST00000544484 C6orf226Q5I0X4 101 aa10.21□□□□□ -0.78
CHD4-211ENST00000544484 LINC00311Q8N616 119 aa10.21□□□□□ -0.78
CHD4-211ENST00000544484 NCOR1P1Q9H4R4 102 aa10.21□□□□□ -0.78
CHD4-211ENST00000544484 SSBP2P81877 361 aaPredicted RBP10.21□□□□□ -0.78
CHD4-211ENST00000544484 TCTEX1D4Q5JR98 221 aa10.21□□□□□ -0.78
CHD4-211ENST00000544484 CST9LQ9H4G1 147 aa10.21□□□□□ -0.78
CHD4-211ENST00000544484 MPV17L2Q567V2 206 aa10.21□□□□□ -0.78
CHD4-211ENST00000544484 MRPL27Q9P0M9 148 aaKnown RBP10.21□□□□□ -0.78
CHD4-211ENST00000544484 CTSZQ9UBR2 303 aa10.21□□□□□ -0.78
CHD4-211ENST00000544484 TMEM75Q8N9X5 138 aa10.2□□□□□ -0.78
CHD4-211ENST00000544484 PFN1P07737 140 aaKnown RBP10.2□□□□□ -0.78
CHD4-211ENST00000544484 SEC11AP67812 179 aa10.2□□□□□ -0.78
CHD4-211ENST00000544484 STPG4Q8N801 248 aa10.2□□□□□ -0.78
CHD4-211ENST00000544484 SHISA9B4DS77 424 aa10.2□□□□□ -0.78
CHD4-211ENST00000544484 PLEKHB2Q96CS7 222 aa10.2□□□□□ -0.78
CHD4-211ENST00000544484 TCF15Q12870 199 aa10.19□□□□□ -0.78
CHD4-211ENST00000544484 GAGE12JA6NER3 117 aa10.19□□□□□ -0.78
CHD4-211ENST00000544484 GAGE1Q13065 139 aa10.19□□□□□ -0.78
CHD4-211ENST00000544484 GAGE4Q13068 117 aa10.19□□□□□ -0.78
CHD4-211ENST00000544484 GAGE5Q13069 117 aa10.19□□□□□ -0.78
CHD4-211ENST00000544484 GAGE13Q4V321 117 aa10.19□□□□□ -0.78
CHD4-211ENST00000544484 ZNF114Q8NC26 417 aa10.19□□□□□ -0.78
CHD4-211ENST00000544484 ZNF625Q96I27 306 aaPredicted RBP10.19□□□□□ -0.78
CHD4-211ENST00000544484 LINC01559Q495D7 138 aa10.19□□□□□ -0.78
CHD4-211ENST00000544484 C11orf53Q8IXP5 236 aa10.19□□□□□ -0.78
CHD4-211ENST00000544484 J3QKU1 62 aa10.19□□□□□ -0.78
CHD4-211ENST00000544484 RASL10AQ92737 203 aa10.19□□□□□ -0.78
CHD4-211ENST00000544484 GFRA4Q9GZZ7 299 aa10.18□□□□□ -0.78
CHD4-211ENST00000544484 TRAV26-2A0A0B4J265 109 aa10.18□□□□□ -0.78
CHD4-211ENST00000544484 A8MWV9 139 aa10.18□□□□□ -0.78
CHD4-211ENST00000544484 FGF23Q9GZV9 251 aaPredicted RBP10.18□□□□□ -0.78
CHD4-211ENST00000544484 CSPG4Q6UVK1 2322 aa10.18□□□□□ -0.78
CHD4-211ENST00000544484 SLX1AQ9BQ83 275 aa10.18□□□□□ -0.78
CHD4-211ENST00000544484 IGLC1P0CG04 106 aa10.17□□□□□ -0.78
CHD4-211ENST00000544484 C18orf32Q8TCD1 76 aa10.17□□□□□ -0.78
CHD4-211ENST00000544484 PRB1P04280 392 aa10.17□□□□□ -0.78
CHD4-211ENST00000544484 ZNF664Q8N3J9 261 aa10.17□□□□□ -0.78
CHD4-211ENST00000544484 PRR25Q96S07 402 aa10.17□□□□□ -0.78
CHD4-211ENST00000544484 ANXA2RQ3ZCQ2 193 aa10.17□□□□□ -0.78
CHD4-211ENST00000544484 PRIMA1Q86XR5 153 aa10.17□□□□□ -0.78
CHD4-211ENST00000544484 ZNF492Q9P255 531 aa10.17□□□□□ -0.78
CHD4-211ENST00000544484 TP53TG1Q9Y2A0 90 aa10.17□□□□□ -0.78
CHD4-211ENST00000544484 H3BRN7 92 aa10.17□□□□□ -0.78
CHD4-211ENST00000544484 TIMM21Q9BVV7 248 aa10.17□□□□□ -0.78
CHD4-211ENST00000544484 NDUFA4O00483 81 aa10.17□□□□□ -0.78
CHD4-211ENST00000544484 KAAG1Q9UBP8 84 aa10.17□□□□□ -0.78
CHD4-211ENST00000544484 PSCAO43653 123 aa10.16□□□□□ -0.78
CHD4-211ENST00000544484 TRPT1Q86TN4 253 aaKnown RBP10.16□□□□□ -0.78
CHD4-211ENST00000544484 CACNA1AO00555 2505 aa10.16□□□□□ -0.78
CHD4-211ENST00000544484 IGHV3-38A0A0C4DH36 116 aa10.16□□□□□ -0.78
CHD4-211ENST00000544484 F5H768 121 aa10.16□□□□□ -0.78
CHD4-211ENST00000544484 FAM104BQ5XKR9 115 aa10.16□□□□□ -0.78
CHD4-211ENST00000544484 NEGR1Q7Z3B1 354 aa10.16□□□□□ -0.78
CHD4-211ENST00000544484 LY6G5BQ8NDX9 201 aa10.16□□□□□ -0.78
CHD4-211ENST00000544484 C17orf77Q96MU5 243 aa10.16□□□□□ -0.78
CHD4-211ENST00000544484 GAGE12BA1L429 117 aa10.16□□□□□ -0.78
CHD4-211ENST00000544484 GAGE7O76087 117 aa10.16□□□□□ -0.78
CHD4-211ENST00000544484 GAGE12FP0CL80 117 aa10.16□□□□□ -0.78
CHD4-211ENST00000544484 GAGE12GP0CL81 117 aa10.16□□□□□ -0.78
CHD4-211ENST00000544484 GAGE12IP0CL82 117 aa10.16□□□□□ -0.78
CHD4-211ENST00000544484 PRSS57Q6UWY2 283 aa10.16□□□□□ -0.78
CHD4-211ENST00000544484 HLA-DMBP28068 263 aa10.16□□□□□ -0.78
CHD4-211ENST00000544484 ATXN8Q156A1 80 aa10.16□□□□□ -0.78
CHD4-211ENST00000544484 DKK4Q9UBT3 224 aa10.16□□□□□ -0.78
CHD4-211ENST00000544484 WNK1Q9H4A3 2382 aa10.15□□□□□ -0.78
CHD4-211ENST00000544484 PRSS46E5RG02 174 aa10.15□□□□□ -0.78
CHD4-211ENST00000544484 TECTAO75443 2155 aa10.15□□□□□ -0.78
CHD4-211ENST00000544484 IGHV1OR15-1A0A075B7D0 117 aa10.15□□□□□ -0.78
CHD4-211ENST00000544484 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.15□□□□□ -0.78
CHD4-211ENST00000544484 IGHV4-59P01825 116 aa10.15□□□□□ -0.78
CHD4-211ENST00000544484 SLAQ13239 276 aa10.15□□□□□ -0.78
CHD4-211ENST00000544484 ESDP10768 282 aa10.15□□□□□ -0.78
CHD4-211ENST00000544484 C2orf66Q6UXQ4 117 aa10.15□□□□□ -0.78
CHD4-211ENST00000544484 IGHV2-5P01817 119 aa10.15□□□□□ -0.79
CHD4-211ENST00000544484 V9GYV3 84 aa10.15□□□□□ -0.79
CHD4-211ENST00000544484 KIF26AQ9ULI4 1882 aaPredicted RBP10.14□□□□□ -0.79
CHD4-211ENST00000544484 IGHV2-70P01814 119 aa10.14□□□□□ -0.79
CHD4-211ENST00000544484 DEFB112Q30KQ8 113 aa10.14□□□□□ -0.79
CHD4-211ENST00000544484 ZC2HC1AQ96GY0 325 aa10.14□□□□□ -0.79
CHD4-211ENST00000544484 GHRHP01286 108 aa10.14□□□□□ -0.79
CHD4-211ENST00000544484 HOXB4P17483 251 aaPredicted RBP10.14□□□□□ -0.79
CHD4-211ENST00000544484 AZU1P20160 251 aa10.14□□□□□ -0.79
CHD4-211ENST00000544484 CDKN1BP46527 198 aa10.14□□□□□ -0.79
CHD4-211ENST00000544484 MRPL51Q4U2R6 128 aaKnown RBP10.14□□□□□ -0.79
CHD4-211ENST00000544484 FXYD5Q96DB9 178 aa10.14□□□□□ -0.79
CHD4-211ENST00000544484 SONP18583 2426 aaKnown RBP10.14□□□□□ -0.79
CHD4-211ENST00000544484 F6UB75 175 aa10.14□□□□□ -0.79
CHD4-211ENST00000544484 OTOGLQ3ZCN5 2332 aa10.13□□□□□ -0.79
CHD4-211ENST00000544484 TRAV8-4A0A0B4J246 113 aa10.13□□□□□ -0.79
CHD4-211ENST00000544484 Q0VG73 95 aa10.13□□□□□ -0.79
CHD4-211ENST00000544484 SS18Q15532 418 aa10.13□□□□□ -0.79
CHD4-211ENST00000544484 ZNF491Q8N8L2 437 aa10.13□□□□□ -0.79
CHD4-211ENST00000544484 NUP210Q8TEM1 1887 aaPredicted RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 192.6 ms