RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 GPR61Q9BZJ8 451 aa15□□□□□ -0.01
COPS7A-218ENST00000543939 AGPAT4-IT1Q9H0P7 198 aa15□□□□□ -0.01
COPS7A-218ENST00000543939 SELENOKQ9Y6D0 94 aa15□□□□□ -0.01
COPS7A-218ENST00000543939 C2orf70A6NJV1 201 aa14.99□□□□□ -0.01
COPS7A-218ENST00000543939 A8MWL6 223 aa14.99□□□□□ -0.01
COPS7A-218ENST00000543939 HIST1H2BKO60814 126 aa14.99□□□□□ -0.01
COPS7A-218ENST00000543939 NDUFA7O95182 113 aa14.99□□□□□ -0.01
COPS7A-218ENST00000543939 HIST1H2BJP06899 126 aa14.99□□□□□ -0.01
COPS7A-218ENST00000543939 CBLN1P23435 193 aa14.99□□□□□ -0.01
COPS7A-218ENST00000543939 HIST1H2BOP23527 126 aa14.99□□□□□ -0.01
COPS7A-218ENST00000543939 HIST1H2BBP33778 126 aa14.99□□□□□ -0.01
COPS7A-218ENST00000543939 HIST1H2BDP58876 126 aa14.99□□□□□ -0.01
COPS7A-218ENST00000543939 HIST1H2BCP62807 126 aa14.99□□□□□ -0.01
COPS7A-218ENST00000543939 HIST2H2BEQ16778 126 aa14.99□□□□□ -0.01
COPS7A-218ENST00000543939 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.99□□□□□ -0.01
COPS7A-218ENST00000543939 C9orf47Q6ZRZ4 202 aa14.99□□□□□ -0.01
COPS7A-218ENST00000543939 HIST1H2BHQ93079 126 aa14.99□□□□□ -0.01
COPS7A-218ENST00000543939 NEU1Q99519 415 aa14.99□□□□□ -0.01
COPS7A-218ENST00000543939 HIST1H2BNQ99877 126 aa14.99□□□□□ -0.01
COPS7A-218ENST00000543939 HIST1H2BMQ99879 126 aa14.99□□□□□ -0.01
COPS7A-218ENST00000543939 INAFM1C9JVW0 142 aa14.98□□□□□ -0.01
COPS7A-218ENST00000543939 TRGC1P0CF51 173 aa14.98□□□□□ -0.01
COPS7A-218ENST00000543939 ZNF738Q8NE65 137 aa14.98□□□□□ -0.01
COPS7A-218ENST00000543939 NUP35Q8NFH5 326 aa14.98□□□□□ -0.01
COPS7A-218ENST00000543939 DPF1Q92782 380 aa14.98□□□□□ -0.01
COPS7A-218ENST00000543939 NDFIP1Q9BT67 221 aa14.98□□□□□ -0.01
COPS7A-218ENST00000543939 NAT8BQ9UHF3 227 aa14.98□□□□□ -0.01
COPS7A-218ENST00000543939 IGKV3-7A0A075B6H7 116 aa14.97□□□□□ -0.01
COPS7A-218ENST00000543939 S100A6P06703 90 aa14.97□□□□□ -0.01
COPS7A-218ENST00000543939 FRMD6-AS1P0C7T7 363 aa14.97□□□□□ -0.01
COPS7A-218ENST00000543939 RPL19P84098 196 aaKnown RBP14.97□□□□□ -0.01
COPS7A-218ENST00000543939 OR2D3Q8NGH3 330 aa14.97□□□□□ -0.01
COPS7A-218ENST00000543939 DCANP1Q8TF63 244 aa14.97□□□□□ -0.01
COPS7A-218ENST00000543939 GFRA4Q9GZZ7 299 aa14.97□□□□□ -0.01
COPS7A-218ENST00000543939 PPP1R14DQ9NXH3 145 aa14.97□□□□□ -0.01
COPS7A-218ENST00000543939 C5orf52A6NGY3 159 aa14.97□□□□□ -0.01
COPS7A-218ENST00000543939 HIGD1CA8MV81 97 aa14.97□□□□□ -0.01
COPS7A-218ENST00000543939 SPINK4O60575 86 aa14.97□□□□□ -0.01
COPS7A-218ENST00000543939 CD28P10747 220 aa14.97□□□□□ -0.01
COPS7A-218ENST00000543939 FABP9Q0Z7S8 132 aa14.97□□□□□ -0.01
COPS7A-218ENST00000543939 SAMD13Q5VXD3 122 aa14.97□□□□□ -0.01
COPS7A-218ENST00000543939 HIST2H2BDQ6DRA6 164 aa14.97□□□□□ -0.01
COPS7A-218ENST00000543939 TRAPPC1Q9Y5R8 145 aa14.97□□□□□ -0.01
COPS7A-218ENST00000543939 NF1P21359 2839 aa14.96□□□□□ -0.01
COPS7A-218ENST00000543939 CUBNO60494 3623 aa14.96□□□□□ -0.01
COPS7A-218ENST00000543939 FAM231BA6NCW3 169 aa14.96□□□□□ -0.01
COPS7A-218ENST00000543939 OVOL1O14753 267 aa14.96□□□□□ -0.01
COPS7A-218ENST00000543939 SH2D1AO60880 128 aa14.96□□□□□ -0.01
COPS7A-218ENST00000543939 ZNF138P52744 262 aa14.96□□□□□ -0.01
COPS7A-218ENST00000543939 SNRPEP62304 92 aaKnown RBP14.96□□□□□ -0.01
COPS7A-218ENST00000543939 FAM162BQ5T6X4 162 aa14.96□□□□□ -0.01
COPS7A-218ENST00000543939 TMEM78Q5T7P6 136 aa14.96□□□□□ -0.01
COPS7A-218ENST00000543939 ADAMTSL5Q6ZMM2 481 aa14.96□□□□□ -0.01
COPS7A-218ENST00000543939 GTSF1Q8WW33 167 aa14.96□□□□□ -0.01
COPS7A-218ENST00000543939 DUX3Q96PT4 197 aa14.96□□□□□ -0.01
COPS7A-218ENST00000543939 ZNF80P51504 273 aaPredicted RBP14.95□□□□□ -0.02
COPS7A-218ENST00000543939 SMUG1Q53HV7 270 aa14.95□□□□□ -0.02
COPS7A-218ENST00000543939 COX19Q49B96 90 aa14.95□□□□□ -0.02
COPS7A-218ENST00000543939 MRPL54Q6P161 138 aaKnown RBP14.95□□□□□ -0.02
COPS7A-218ENST00000543939 GNB1LQ9BYB4 327 aa14.95□□□□□ -0.02
COPS7A-218ENST00000543939 MS4A6AQ9H2W1 248 aa14.95□□□□□ -0.02
COPS7A-218ENST00000543939 SAV1Q9H4B6 383 aaPredicted RBP14.95□□□□□ -0.02
COPS7A-218ENST00000543939 ID1P41134 155 aa14.94□□□□□ -0.02
COPS7A-218ENST00000543939 C11orf44Q8N8P7 122 aa14.94□□□□□ -0.02
COPS7A-218ENST00000543939 M0QZ24 198 aa14.93□□□□□ -0.02
COPS7A-218ENST00000543939 WDR73Q6P4I2 378 aa14.93□□□□□ -0.02
COPS7A-218ENST00000543939 OR9G4Q8NGQ1 327 aa14.93□□□□□ -0.02
COPS7A-218ENST00000543939 DLX4Q92988 240 aaPredicted RBP14.93□□□□□ -0.02
COPS7A-218ENST00000543939 LINC00477Q96M19 166 aa14.93□□□□□ -0.02
COPS7A-218ENST00000543939 CITED2Q99967 270 aaPredicted RBP14.93□□□□□ -0.02
COPS7A-218ENST00000543939 PEMTQ9UBM1 199 aa14.93□□□□□ -0.02
COPS7A-218ENST00000543939 HAX1O00165 279 aa14.92□□□□□ -0.02
COPS7A-218ENST00000543939 ZNF705DP0CH99 300 aaPredicted RBP14.92□□□□□ -0.02
COPS7A-218ENST00000543939 ZNF705BP0CI00 300 aaPredicted RBP14.92□□□□□ -0.02
COPS7A-218ENST00000543939 GZMBP10144 247 aa14.92□□□□□ -0.02
COPS7A-218ENST00000543939 FOXA3P55318 350 aaPredicted RBP14.92□□□□□ -0.02
COPS7A-218ENST00000543939 NDUFA6P56556 154 aa14.92□□□□□ -0.02
COPS7A-218ENST00000543939 RASL11AQ6T310 242 aa14.92□□□□□ -0.02
COPS7A-218ENST00000543939 TMEM136Q6ZRR5 245 aa14.92□□□□□ -0.02
COPS7A-218ENST00000543939 RBPMS2Q6ZRY4 209 aaKnown RBP14.92□□□□□ -0.02
COPS7A-218ENST00000543939 WFDC3Q8IUB2 231 aa14.92□□□□□ -0.02
COPS7A-218ENST00000543939 OR10J6PQ8NGY7 276 aa14.92□□□□□ -0.02
COPS7A-218ENST00000543939 RAX2Q96IS3 184 aa14.92□□□□□ -0.02
COPS7A-218ENST00000543939 RNF114Q9Y508 228 aa14.92□□□□□ -0.02
COPS7A-218ENST00000543939 LENEPQ9Y5L5 61 aa14.92□□□□□ -0.02
COPS7A-218ENST00000543939 TSSC4Q9Y5U2 329 aaPredicted RBP14.92□□□□□ -0.02
COPS7A-218ENST00000543939 SNURFLB1AK76 121 aa14.92□□□□□ -0.02
COPS7A-218ENST00000543939 K7EQG2 157 aa14.92□□□□□ -0.02
COPS7A-218ENST00000543939 DEFB1P60022 68 aa14.92□□□□□ -0.02
COPS7A-218ENST00000543939 MRPL18Q9H0U6 180 aaKnown RBP14.92□□□□□ -0.02
COPS7A-218ENST00000543939 UBE2CO00762 179 aa14.91□□□□□ -0.02
COPS7A-218ENST00000543939 TCF21O43680 179 aa14.91□□□□□ -0.02
COPS7A-218ENST00000543939 MT-ND6P03923 174 aa14.91□□□□□ -0.02
COPS7A-218ENST00000543939 PROK1P58294 105 aa14.91□□□□□ -0.02
COPS7A-218ENST00000543939 FHL3Q13643 280 aa14.91□□□□□ -0.02
COPS7A-218ENST00000543939 ATP5L2Q7Z4Y8 100 aa14.91□□□□□ -0.02
COPS7A-218ENST00000543939 OR8A1Q8NGG7 326 aa14.91□□□□□ -0.02
COPS7A-218ENST00000543939 PGLYRP4Q96LB8 373 aa14.91□□□□□ -0.02
COPS7A-218ENST00000543939 HIVEP1P15822 2718 aa14.9□□□□□ -0.02
COPS7A-218ENST00000543939 A0A1B0GXF2 115 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 160.9 ms