RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 OR4X2Q8NGF9 303 aa13.11□□□□□ -0.31
PTPRO-209ENST00000543886 ZNF580Q9UK33 172 aa13.11□□□□□ -0.31
PTPRO-209ENST00000543886 SH2D1AO60880 128 aa13.11□□□□□ -0.31
PTPRO-209ENST00000543886 Q6AWC8 147 aa13.11□□□□□ -0.31
PTPRO-209ENST00000543886 COX8CQ7Z4L0 72 aa13.11□□□□□ -0.31
PTPRO-209ENST00000543886 KCNS1Q96KK3 526 aa13.11□□□□□ -0.31
PTPRO-209ENST00000543886 MIEN1Q9BRT3 115 aa13.11□□□□□ -0.31
PTPRO-209ENST00000543886 HAX1O00165 279 aa13.1□□□□□ -0.31
PTPRO-209ENST00000543886 RPLP1P05386 114 aaKnown RBP13.1□□□□□ -0.31
PTPRO-209ENST00000543886 CFHR3Q02985 330 aa13.1□□□□□ -0.31
PTPRO-209ENST00000543886 C8orf86Q6ZUL3 223 aa13.1□□□□□ -0.31
PTPRO-209ENST00000543886 A0A1B0GUT8 65 aa13.09□□□□□ -0.31
PTPRO-209ENST00000543886 TMEM189A5PLL7 270 aa13.09□□□□□ -0.31
PTPRO-209ENST00000543886 RBAKDNA6NC62 111 aa13.09□□□□□ -0.31
PTPRO-209ENST00000543886 UNQ9165/PRO28630Q6UXU0 137 aa13.09□□□□□ -0.31
PTPRO-209ENST00000543886 LCNL1Q6ZST4 164 aa13.09□□□□□ -0.31
PTPRO-209ENST00000543886 C18orf32Q8TCD1 76 aa13.09□□□□□ -0.31
PTPRO-209ENST00000543886 RCHY1Q96PM5 261 aa13.09□□□□□ -0.31
PTPRO-209ENST00000543886 VAMP8Q9BV40 100 aa13.09□□□□□ -0.31
PTPRO-209ENST00000543886 G0S2P27469 103 aa13.09□□□□□ -0.31
PTPRO-209ENST00000543886 RIGQ13278 110 aa13.09□□□□□ -0.31
PTPRO-209ENST00000543886 TMEM95Q3KNT9 176 aa13.09□□□□□ -0.31
PTPRO-209ENST00000543886 SIGLECL1Q8N7X8 197 aa13.09□□□□□ -0.31
PTPRO-209ENST00000543886 GLMPQ8WWB7 406 aa13.09□□□□□ -0.31
PTPRO-209ENST00000543886 BORCS7Q96B45 105 aa13.09□□□□□ -0.31
PTPRO-209ENST00000543886 ALKBH7Q9BT30 221 aaPredicted RBP13.09□□□□□ -0.31
PTPRO-209ENST00000543886 KMT2BQ9UMN6 2715 aaPredicted RBP13.09□□□□□ -0.31
PTPRO-209ENST00000543886 PRAC2D3DTV9 90 aa13.08□□□□□ -0.32
PTPRO-209ENST00000543886 FSHBP01225 129 aa13.08□□□□□ -0.32
PTPRO-209ENST00000543886 BMI1P35226 326 aa13.08□□□□□ -0.32
PTPRO-209ENST00000543886 KLF5Q13887 457 aaPredicted RBP13.08□□□□□ -0.32
PTPRO-209ENST00000543886 MRPL53Q96EL3 112 aaKnown RBP13.08□□□□□ -0.32
PTPRO-209ENST00000543886 Q96MF0 132 aa13.08□□□□□ -0.32
PTPRO-209ENST00000543886 TPPP3Q9BW30 176 aa13.08□□□□□ -0.32
PTPRO-209ENST00000543886 CR1P17927 2039 aa13.08□□□□□ -0.32
PTPRO-209ENST00000543886 ABCA12Q86UK0 2595 aa13.08□□□□□ -0.32
PTPRO-209ENST00000543886 TRAV8-2A0A0B4J237 113 aa13.08□□□□□ -0.32
PTPRO-209ENST00000543886 ZNF25P17030 456 aaPredicted RBP13.08□□□□□ -0.32
PTPRO-209ENST00000543886 ERCC8Q13216 396 aa13.08□□□□□ -0.32
PTPRO-209ENST00000543886 NPFFR1Q9GZQ6 430 aa13.08□□□□□ -0.32
PTPRO-209ENST00000543886 TMSB15BA0A087X1C1 80 aa13.07□□□□□ -0.32
PTPRO-209ENST00000543886 PRR31Q5SQ13 230 aa13.07□□□□□ -0.32
PTPRO-209ENST00000543886 C16orf92Q96LL3 132 aa13.07□□□□□ -0.32
PTPRO-209ENST00000543886 VPREB3Q9UKI3 123 aa13.07□□□□□ -0.32
PTPRO-209ENST00000543886 A0A1B0GW15 77 aa13.06□□□□□ -0.32
PTPRO-209ENST00000543886 A0A1W2PS18 150 aa13.06□□□□□ -0.32
PTPRO-209ENST00000543886 ARMS2P0C7Q2 107 aa13.06□□□□□ -0.32
PTPRO-209ENST00000543886 PMCHP20382 165 aa13.06□□□□□ -0.32
PTPRO-209ENST00000543886 AMTP48728 403 aa13.06□□□□□ -0.32
PTPRO-209ENST00000543886 C9orf139Q6ZV77 190 aa13.06□□□□□ -0.32
PTPRO-209ENST00000543886 CLEC5AQ9NY25 188 aa13.06□□□□□ -0.32
PTPRO-209ENST00000543886 SMAD7O15105 426 aaKnown RBP13.06□□□□□ -0.32
PTPRO-209ENST00000543886 GPX1P07203 203 aa13.06□□□□□ -0.32
PTPRO-209ENST00000543886 RPS20P60866 119 aaKnown RBP13.06□□□□□ -0.32
PTPRO-209ENST00000543886 ZNF324O75467 553 aaPredicted RBP13.05□□□□□ -0.32
PTPRO-209ENST00000543886 Q6YL49 198 aa13.05□□□□□ -0.32
PTPRO-209ENST00000543886 PAM16Q9Y3D7 125 aa13.05□□□□□ -0.32
PTPRO-209ENST00000543886 TENM4Q6N022 2769 aa13.05□□□□□ -0.32
PTPRO-209ENST00000543886 LOC102724200A0A096LPH7 203 aaPredicted RBP13.04□□□□□ -0.32
PTPRO-209ENST00000543886 ZNF80P51504 273 aaPredicted RBP13.04□□□□□ -0.32
PTPRO-209ENST00000543886 GAGE1Q13065 139 aa13.04□□□□□ -0.32
PTPRO-209ENST00000543886 TMEM78Q5T7P6 136 aa13.04□□□□□ -0.32
PTPRO-209ENST00000543886 CYB5R2Q6BCY4 276 aa13.04□□□□□ -0.32
PTPRO-209ENST00000543886 PEF1Q9UBV8 284 aaKnown RBP13.04□□□□□ -0.32
PTPRO-209ENST00000543886 ZFHX3Q15911 3703 aa13.04□□□□□ -0.32
PTPRO-209ENST00000543886 CD33P20138 364 aa13.04□□□□□ -0.32
PTPRO-209ENST00000543886 PSMB8P28062 276 aa13.04□□□□□ -0.32
PTPRO-209ENST00000543886 PRSS57Q6UWY2 283 aa13.04□□□□□ -0.32
PTPRO-209ENST00000543886 DLEU1O43261 78 aa13.03□□□□□ -0.32
PTPRO-209ENST00000543886 RNASEKQ6P5S7 137 aaKnown RBP13.03□□□□□ -0.32
PTPRO-209ENST00000543886 IL17RELQ6ZVW7 336 aa13.03□□□□□ -0.32
PTPRO-209ENST00000543886 CSPG4Q6UVK1 2322 aa13.03□□□□□ -0.32
PTPRO-209ENST00000543886 TMEM89A2RUT3 159 aa13.03□□□□□ -0.32
PTPRO-209ENST00000543886 FABP5P3A8MUU1 101 aa13.03□□□□□ -0.32
PTPRO-209ENST00000543886 ZNF138P52744 262 aa13.03□□□□□ -0.32
PTPRO-209ENST00000543886 SRSF2Q01130 221 aaKnown RBP13.03□□□□□ -0.32
PTPRO-209ENST00000543886 LYZL1Q6UWQ5 148 aa13.03□□□□□ -0.32
PTPRO-209ENST00000543886 TMEM208Q9BTX3 173 aa13.03□□□□□ -0.32
PTPRO-209ENST00000543886 AGPAT4-IT1Q9H0P7 198 aa13.03□□□□□ -0.32
PTPRO-209ENST00000543886 DAZ1Q9NQZ3 744 aaKnown RBP13.03□□□□□ -0.32
PTPRO-209ENST00000543886 NAV2Q8IVL1 2488 aa13.03□□□□□ -0.32
PTPRO-209ENST00000543886 HSBP1O75506 76 aa13.02□□□□□ -0.33
PTPRO-209ENST00000543886 ORM1P02763 201 aa13.02□□□□□ -0.33
PTPRO-209ENST00000543886 NTF3P20783 257 aa13.02□□□□□ -0.33
PTPRO-209ENST00000543886 TDRG1Q3Y452 100 aa13.02□□□□□ -0.33
PTPRO-209ENST00000543886 GATD1Q8NB37 220 aa13.02□□□□□ -0.33
PTPRO-209ENST00000543886 ZNF738Q8NE65 137 aa13.02□□□□□ -0.33
PTPRO-209ENST00000543886 NRN1Q9NPD7 142 aa13.02□□□□□ -0.33
PTPRO-209ENST00000543886 PPP1R14DQ9NXH3 145 aa13.02□□□□□ -0.33
PTPRO-209ENST00000543886 GOLT1BQ9Y3E0 138 aa13.02□□□□□ -0.33
PTPRO-209ENST00000543886 IGHV7-4-1A0A0J9YVY3 117 aa13.01□□□□□ -0.33
PTPRO-209ENST00000543886 HOXA3O43365 443 aaPredicted RBP13.01□□□□□ -0.33
PTPRO-209ENST00000543886 RPL11P62913 178 aaKnown RBP13.01□□□□□ -0.33
PTPRO-209ENST00000543886 FAM106AQ4KMX7 169 aa13.01□□□□□ -0.33
PTPRO-209ENST00000543886 KRTAP1-3Q8IUG1 177 aa13.01□□□□□ -0.33
PTPRO-209ENST00000543886 KRTDAPP60985 99 aa13.01□□□□□ -0.33
PTPRO-209ENST00000543886 TM4SF20Q53R12 229 aa13.01□□□□□ -0.33
PTPRO-209ENST00000543886 C9orf47Q6ZRZ4 202 aa13.01□□□□□ -0.33
PTPRO-209ENST00000543886 FAM19A2Q8N3H0 131 aa13.01□□□□□ -0.33
PTPRO-209ENST00000543886 FER1L6-AS1Q8NA97 138 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 190.8 ms