RNA–Protein interactions for RNA: ENST00000543854.5

SPPL3-208, Transcript of signal peptide peptidase like 3, human

TSL 5

Gene SPPL3, Length 508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPPL3-208	ENST00000543854	FAM231C	P0DMU5	169 aa		13.55	□□□□□ -0.24
SPPL3-208	ENST00000543854	M6PR	P20645	277 aa		13.55	□□□□□ -0.24
SPPL3-208	ENST00000543854	TMEM78	Q5T7P6	136 aa		13.55	□□□□□ -0.24
SPPL3-208	ENST00000543854	C9orf47	Q6ZRZ4	202 aa		13.55	□□□□□ -0.24
SPPL3-208	ENST00000543854	ZNF503	Q96F45	646 aa		13.55	□□□□□ -0.24
SPPL3-208	ENST00000543854	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	13.55	□□□□□ -0.24
SPPL3-208	ENST00000543854	C7orf71	A4D174	169 aa		13.54	□□□□□ -0.24
SPPL3-208	ENST00000543854	CSN1S1	P47710	185 aa		13.54	□□□□□ -0.24
SPPL3-208	ENST00000543854	LYPD1	Q8N2G4	141 aa		13.54	□□□□□ -0.24
SPPL3-208	ENST00000543854	PYGO2	Q9BRQ0	406 aa		13.54	□□□□□ -0.24
SPPL3-208	ENST00000543854	AGPAT4-IT1	Q9H0P7	198 aa		13.54	□□□□□ -0.24
SPPL3-208	ENST00000543854		A0A1W2PPV4	95 aa		13.53	□□□□□ -0.24
SPPL3-208	ENST00000543854	KLLN	B2CW77	178 aa		13.53	□□□□□ -0.24
SPPL3-208	ENST00000543854	RAB2A	P61019	212 aa		13.53	□□□□□ -0.24
SPPL3-208	ENST00000543854	RAN	P62826	216 aa	Known RBP	13.53	□□□□□ -0.24
SPPL3-208	ENST00000543854	HSD17B11	Q8NBQ5	300 aa		13.53	□□□□□ -0.24
SPPL3-208	ENST00000543854	INO80E	Q8NBZ0	244 aa	Predicted RBP	13.53	□□□□□ -0.24
SPPL3-208	ENST00000543854	FAM19A4	Q96LR4	140 aa		13.53	□□□□□ -0.24
SPPL3-208	ENST00000543854		Q9H3A6	140 aa		13.53	□□□□□ -0.24
SPPL3-208	ENST00000543854	NOP10	Q9NPE3	64 aa	Known RBP	13.53	□□□□□ -0.24
SPPL3-208	ENST00000543854	CRISP2	P16562	243 aa		13.52	□□□□□ -0.25
SPPL3-208	ENST00000543854	TMEM88	Q6PEY1	159 aa		13.52	□□□□□ -0.25
SPPL3-208	ENST00000543854	PQLC2	Q6ZP29	291 aa		13.52	□□□□□ -0.25
SPPL3-208	ENST00000543854	VGLL1	Q99990	258 aa		13.52	□□□□□ -0.25
SPPL3-208	ENST00000543854	FXYD6-FXYD2	A0A087WZ82	144 aa		13.51	□□□□□ -0.25
SPPL3-208	ENST00000543854	SNURFL	B1AK76	121 aa		13.51	□□□□□ -0.25
SPPL3-208	ENST00000543854	EIF3G	O75821	320 aa	Known RBP eCLIP	13.51	□□□□□ -0.25
SPPL3-208	ENST00000543854	NMB	P08949	121 aa		13.51	□□□□□ -0.25
SPPL3-208	ENST00000543854	BTN1A1	Q13410	526 aa		13.51	□□□□□ -0.25
SPPL3-208	ENST00000543854		Q5BKY6	102 aa		13.51	□□□□□ -0.25
SPPL3-208	ENST00000543854	OR10G4	Q8NGN3	311 aa		13.51	□□□□□ -0.25
SPPL3-208	ENST00000543854	OR10G9	Q8NGN4	311 aa		13.51	□□□□□ -0.25
SPPL3-208	ENST00000543854	OR10G7	Q8NGN6	311 aa		13.51	□□□□□ -0.25
SPPL3-208	ENST00000543854	OR2T35	Q8NGX2	323 aa		13.51	□□□□□ -0.25
SPPL3-208	ENST00000543854	OR2G3	Q8NGZ4	309 aa		13.51	□□□□□ -0.25
SPPL3-208	ENST00000543854	PSMG3	Q9BT73	122 aa	Predicted RBP	13.51	□□□□□ -0.25
SPPL3-208	ENST00000543854	FRAS1	Q86XX4	4008 aa		13.5	□□□□□ -0.25
SPPL3-208	ENST00000543854	RBAKDN	A6NC62	111 aa		13.5	□□□□□ -0.25
SPPL3-208	ENST00000543854	ATP5G1	P05496	136 aa		13.5	□□□□□ -0.25
SPPL3-208	ENST00000543854	GPX1	P07203	203 aa		13.5	□□□□□ -0.25
SPPL3-208	ENST00000543854	ATP5G3	P48201	142 aa		13.5	□□□□□ -0.25
SPPL3-208	ENST00000543854	ZNF138	P52744	262 aa		13.5	□□□□□ -0.25
SPPL3-208	ENST00000543854		Q8TAT8	98 aa		13.5	□□□□□ -0.25
SPPL3-208	ENST00000543854	ZNF492	Q9P255	531 aa		13.5	□□□□□ -0.25
SPPL3-208	ENST00000543854	BIRC6	Q9NR09	4857 aa		13.49	□□□□□ -0.25
SPPL3-208	ENST00000543854	CBY3	A6NI87	242 aa		13.49	□□□□□ -0.25
SPPL3-208	ENST00000543854		F5H768	121 aa		13.49	□□□□□ -0.25
SPPL3-208	ENST00000543854	RNASE4	P34096	147 aa	Known RBP	13.49	□□□□□ -0.25
SPPL3-208	ENST00000543854	CDC34	P49427	236 aa	Predicted RBP	13.49	□□□□□ -0.25
SPPL3-208	ENST00000543854	CD300C	Q08708	224 aa		13.49	□□□□□ -0.25
SPPL3-208	ENST00000543854	FAM74A1	Q5RGS3	127 aa		13.49	□□□□□ -0.25
SPPL3-208	ENST00000543854	UBE2DNL	Q8IWF7	75 aa		13.49	□□□□□ -0.25
SPPL3-208	ENST00000543854	ZFAND2A	Q8N6M9	145 aa		13.49	□□□□□ -0.25
SPPL3-208	ENST00000543854	POM121L12	Q8N7R1	296 aa		13.49	□□□□□ -0.25
SPPL3-208	ENST00000543854	C15orf53	Q8NAA6	179 aa		13.49	□□□□□ -0.25
SPPL3-208	ENST00000543854	ZNF680	Q8NEM1	530 aa		13.49	□□□□□ -0.25
SPPL3-208	ENST00000543854	RXFP4	Q8TDU9	374 aa		13.49	□□□□□ -0.25
SPPL3-208	ENST00000543854	TRBV7-9	A0A0J9YWB2	115 aa		13.48	□□□□□ -0.25
SPPL3-208	ENST00000543854	RNF222	A6NCQ9	220 aa		13.48	□□□□□ -0.25
SPPL3-208	ENST00000543854	ATP6V0C	P27449	155 aa		13.48	□□□□□ -0.25
SPPL3-208	ENST00000543854	CMTM2	Q8TAZ6	248 aa		13.48	□□□□□ -0.25
SPPL3-208	ENST00000543854	HYLS1	Q96M11	299 aa		13.48	□□□□□ -0.25
SPPL3-208	ENST00000543854	OTOR	Q9NRC9	128 aa		13.48	□□□□□ -0.25
SPPL3-208	ENST00000543854	TNFSF18	Q9UNG2	199 aa		13.48	□□□□□ -0.25
SPPL3-208	ENST00000543854	HMGB3	O15347	200 aa	Known RBP	13.47	□□□□□ -0.25
SPPL3-208	ENST00000543854	ZNF324	O75467	553 aa	Predicted RBP	13.47	□□□□□ -0.25
SPPL3-208	ENST00000543854	MB	P02144	154 aa		13.47	□□□□□ -0.25
SPPL3-208	ENST00000543854	ARL14EPL	P0DKL9	152 aa		13.47	□□□□□ -0.25
SPPL3-208	ENST00000543854	LINC00467	Q9BRT7	94 aa		13.47	□□□□□ -0.25
SPPL3-208	ENST00000543854	SH3BGRL3	Q9H299	93 aa		13.47	□□□□□ -0.25
SPPL3-208	ENST00000543854	BORCS7-ASMT	A0A0B4J1R7	106 aa		13.46	□□□□□ -0.25
SPPL3-208	ENST00000543854	DIRC3	C9JPN6	131 aa		13.46	□□□□□ -0.25
SPPL3-208	ENST00000543854	SERF2	P84101	59 aa		13.46	□□□□□ -0.25
SPPL3-208	ENST00000543854	PRR9	Q5T870	116 aa		13.46	□□□□□ -0.25
SPPL3-208	ENST00000543854	EIF4E3	Q8N5X7	224 aa	Known RBP	13.46	□□□□□ -0.25
SPPL3-208	ENST00000543854	RPH3AL	Q9UNE2	315 aa		13.46	□□□□□ -0.25
SPPL3-208	ENST00000543854	GAGE12B	A1L429	117 aa		13.45	□□□□□ -0.26
SPPL3-208	ENST00000543854	RGS13	O14921	159 aa		13.45	□□□□□ -0.26
SPPL3-208	ENST00000543854	GAGE7	O76087	117 aa		13.45	□□□□□ -0.26
SPPL3-208	ENST00000543854	GAGE12F	P0CL80	117 aa		13.45	□□□□□ -0.26
SPPL3-208	ENST00000543854	GAGE12G	P0CL81	117 aa		13.45	□□□□□ -0.26
SPPL3-208	ENST00000543854	GAGE12I	P0CL82	117 aa		13.45	□□□□□ -0.26
SPPL3-208	ENST00000543854	DAZ2	Q13117	558 aa	Known RBP	13.45	□□□□□ -0.26
SPPL3-208	ENST00000543854	ANXA2R	Q3ZCQ2	193 aa		13.45	□□□□□ -0.26
SPPL3-208	ENST00000543854	LINC00612	Q8N6U2	182 aa		13.45	□□□□□ -0.26
SPPL3-208	ENST00000543854	GNPNAT1	Q96EK6	184 aa	Predicted RBP	13.45	□□□□□ -0.26
SPPL3-208	ENST00000543854	DNAH10	Q8IVF4	4471 aa		13.45	□□□□□ -0.26
SPPL3-208	ENST00000543854	PGP	A6NDG6	321 aa		13.44	□□□□□ -0.26
SPPL3-208	ENST00000543854	STAG3L2	P0CL84	134 aa		13.44	□□□□□ -0.26
SPPL3-208	ENST00000543854	STAG3L3	P0CL85	134 aa		13.44	□□□□□ -0.26
SPPL3-208	ENST00000543854	RPL7L1	Q6DKI1	246 aa	Known RBP	13.44	□□□□□ -0.26
SPPL3-208	ENST00000543854	RAB24	Q969Q5	203 aa		13.44	□□□□□ -0.26
SPPL3-208	ENST00000543854	GSN-AS1	Q9NRJ2	163 aa		13.44	□□□□□ -0.26
SPPL3-208	ENST00000543854	LENEP	Q9Y5L5	61 aa		13.44	□□□□□ -0.26
SPPL3-208	ENST00000543854		G3V3Q6	166 aa		13.43	□□□□□ -0.26
SPPL3-208	ENST00000543854	C11orf72	Q8NBR9	251 aa		13.43	□□□□□ -0.26
SPPL3-208	ENST00000543854	TMED6	Q8WW62	240 aa		13.43	□□□□□ -0.26
SPPL3-208	ENST00000543854	ARPC5L	Q9BPX5	153 aa		13.43	□□□□□ -0.26
SPPL3-208	ENST00000543854	IGHV1OR15-1	A0A075B7D0	117 aa		13.42	□□□□□ -0.26
SPPL3-208	ENST00000543854	ARPC5	O15511	151 aa		13.42	□□□□□ -0.26

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