RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 BLOC1S1P78537 153 aa4.62□□□□□ -1.67
LTBR-212ENST00000543542 C5orf17Q8NAS9 161 aa4.62□□□□□ -1.67
LTBR-212ENST00000543542 SUN5Q8TC36 379 aa4.62□□□□□ -1.67
LTBR-212ENST00000543542 MBD3L1Q8WWY6 194 aa4.62□□□□□ -1.67
LTBR-212ENST00000543542 CLUHP3Q96NS8 147 aa4.62□□□□□ -1.67
LTBR-212ENST00000543542 OVOL2Q9BRP0 275 aa4.62□□□□□ -1.67
LTBR-212ENST00000543542 NDFIP1Q9BT67 221 aa4.62□□□□□ -1.67
LTBR-212ENST00000543542 AGPAT4-IT1Q9H0P7 198 aa4.62□□□□□ -1.67
LTBR-212ENST00000543542 GNG13Q9P2W3 67 aa4.62□□□□□ -1.67
LTBR-212ENST00000543542 TP53TG1Q9Y2A0 90 aa4.62□□□□□ -1.67
LTBR-212ENST00000543542 SERTM2A0A1B0GWG4 89 aa4.61□□□□□ -1.67
LTBR-212ENST00000543542 RBAKDNA6NC62 111 aa4.61□□□□□ -1.67
LTBR-212ENST00000543542 FAM74A7A6NL05 159 aa4.61□□□□□ -1.67
LTBR-212ENST00000543542 GGTLC3B5MD39 225 aa4.61□□□□□ -1.67
LTBR-212ENST00000543542 TCRAP04437 139 aa4.61□□□□□ -1.67
LTBR-212ENST00000543542 CT45A10P0DMU9 189 aa4.61□□□□□ -1.67
LTBR-212ENST00000543542 HTN1P15515 57 aa4.61□□□□□ -1.67
LTBR-212ENST00000543542 RNASE4P34096 147 aaKnown RBP4.61□□□□□ -1.67
LTBR-212ENST00000543542 UBE2G1P62253 170 aa4.61□□□□□ -1.67
LTBR-212ENST00000543542 AMTNQ6UX39 209 aa4.61□□□□□ -1.67
LTBR-212ENST00000543542 C9orf47Q6ZRZ4 202 aa4.61□□□□□ -1.67
LTBR-212ENST00000543542 CYB561D1Q8N8Q1 229 aa4.61□□□□□ -1.67
LTBR-212ENST00000543542 Q8TAT8 98 aa4.61□□□□□ -1.67
LTBR-212ENST00000543542 SGK494Q96LW2 274 aa4.61□□□□□ -1.67
LTBR-212ENST00000543542 IGF2BP2-AS1Q96M15 143 aa4.61□□□□□ -1.67
LTBR-212ENST00000543542 LINC01587Q99440 93 aa4.61□□□□□ -1.67
LTBR-212ENST00000543542 VGLL1Q99990 258 aa4.61□□□□□ -1.67
LTBR-212ENST00000543542 NIPSNAP3BQ9BS92 247 aa4.61□□□□□ -1.67
LTBR-212ENST00000543542 MANBALQ9NQG1 85 aa4.61□□□□□ -1.67
LTBR-212ENST00000543542 ZNF492Q9P255 531 aa4.61□□□□□ -1.67
LTBR-212ENST00000543542 EPDR1Q9UM22 224 aa4.61□□□□□ -1.67
LTBR-212ENST00000543542 YTHDF2Q9Y5A9 579 aaKnown RBP4.61□□□□□ -1.67
LTBR-212ENST00000543542 DNAH9Q9NYC9 4486 aa4.6□□□□□ -1.67
LTBR-212ENST00000543542 TRAV8-1A0A0A6YYK1 113 aa4.6□□□□□ -1.67
LTBR-212ENST00000543542 TRAV12-3A0A0B4J271 114 aa4.6□□□□□ -1.67
LTBR-212ENST00000543542 A0A0J9YWU9 116 aa4.6□□□□□ -1.67
LTBR-212ENST00000543542 A8MTW9 85 aa4.6□□□□□ -1.67
LTBR-212ENST00000543542 C11orf94C9JXX5 98 aa4.6□□□□□ -1.67
LTBR-212ENST00000543542 PEX7O00628 323 aa4.6□□□□□ -1.67
LTBR-212ENST00000543542 DEFB4AO15263 64 aa4.6□□□□□ -1.67
LTBR-212ENST00000543542 GIG44P09565 113 aaPredicted RBP4.6□□□□□ -1.67
LTBR-212ENST00000543542 MIFP14174 115 aa4.6□□□□□ -1.67
LTBR-212ENST00000543542 AKR1C3P42330 323 aa4.6□□□□□ -1.67
LTBR-212ENST00000543542 ATP5G3P48201 142 aa4.6□□□□□ -1.67
LTBR-212ENST00000543542 CCL20P78556 96 aa4.6□□□□□ -1.67
LTBR-212ENST00000543542 RRN3P1Q2M238 152 aa4.6□□□□□ -1.67
LTBR-212ENST00000543542 PRNTQ86SH4 94 aa4.6□□□□□ -1.67
LTBR-212ENST00000543542 CCDC28AQ8IWP9 274 aa4.6□□□□□ -1.67
LTBR-212ENST00000543542 TMEM256Q8N2U0 113 aa4.6□□□□□ -1.67
LTBR-212ENST00000543542 ARL6IP6Q8N6S5 226 aa4.6□□□□□ -1.67
LTBR-212ENST00000543542 HIST1H2BAQ96A08 127 aa4.6□□□□□ -1.67
LTBR-212ENST00000543542 ODF3Q96PU9 254 aa4.6□□□□□ -1.67
LTBR-212ENST00000543542 ATG101Q9BSB4 218 aa4.6□□□□□ -1.67
LTBR-212ENST00000543542 PSG8Q9UQ74 426 aa4.6□□□□□ -1.67
LTBR-212ENST00000543542 ARL2-SNX15V9GYD0 113 aa4.6□□□□□ -1.67
LTBR-212ENST00000543542 COL7A1Q02388 2944 aa4.59□□□□□ -1.67
LTBR-212ENST00000543542 PRKDCP78527 4128 aaKnown RBP4.59□□□□□ -1.67
LTBR-212ENST00000543542 TRAV1-1A0A0B4J248 108 aa4.59□□□□□ -1.67
LTBR-212ENST00000543542 TRAV34A0A0B4J273 112 aa4.59□□□□□ -1.67
LTBR-212ENST00000543542 C7orf71A4D174 169 aa4.59□□□□□ -1.67
LTBR-212ENST00000543542 SMIM9A6NGZ8 99 aa4.59□□□□□ -1.67
LTBR-212ENST00000543542 FBLL1A6NHQ2 334 aaKnown RBP4.59□□□□□ -1.67
LTBR-212ENST00000543542 RGS13O14921 159 aa4.59□□□□□ -1.67
LTBR-212ENST00000543542 EMP1P54849 157 aa4.59□□□□□ -1.67
LTBR-212ENST00000543542 RAB14P61106 215 aa4.59□□□□□ -1.67
LTBR-212ENST00000543542 FLI1Q01543 452 aaPredicted RBP4.59□□□□□ -1.67
LTBR-212ENST00000543542 BTN1A1Q13410 526 aa4.59□□□□□ -1.67
LTBR-212ENST00000543542 GFI1BQ5VTD9 330 aa4.59□□□□□ -1.67
LTBR-212ENST00000543542 TEX261Q6UWH6 196 aa4.59□□□□□ -1.67
LTBR-212ENST00000543542 TMEM75Q8N9X5 138 aa4.59□□□□□ -1.67
LTBR-212ENST00000543542 CSNK1G2-AS1Q8NCQ2 148 aa4.59□□□□□ -1.67
LTBR-212ENST00000543542 C20orf144Q9BQM9 153 aa4.59□□□□□ -1.67
LTBR-212ENST00000543542 TCEAL7Q9BRU2 100 aa4.59□□□□□ -1.67
LTBR-212ENST00000543542 TREM1Q9NP99 234 aa4.59□□□□□ -1.67
LTBR-212ENST00000543542 LENEPQ9Y5L5 61 aa4.59□□□□□ -1.67
LTBR-212ENST00000543542 IGHV4-28A0A0C4DH34 117 aa4.58□□□□□ -1.68
LTBR-212ENST00000543542 LOC102723971A0A1B0GUV8 181 aa4.58□□□□□ -1.68
LTBR-212ENST00000543542 SCO2A0A1W2PP80 73 aa4.58□□□□□ -1.68
LTBR-212ENST00000543542 CBY3A6NI87 242 aa4.58□□□□□ -1.68
LTBR-212ENST00000543542 ZNF705GA8MUZ8 300 aaPredicted RBP4.58□□□□□ -1.68
LTBR-212ENST00000543542 H7BYZ3 331 aa4.58□□□□□ -1.68
LTBR-212ENST00000543542 CRXO43186 299 aaPredicted RBP4.58□□□□□ -1.68
LTBR-212ENST00000543542 NMBP08949 121 aa4.58□□□□□ -1.68
LTBR-212ENST00000543542 CRISP2P16562 243 aa4.58□□□□□ -1.68
LTBR-212ENST00000543542 TAGLN2P37802 199 aaKnown RBP4.58□□□□□ -1.68
LTBR-212ENST00000543542 MEF2BQ02080 365 aaPredicted RBP4.58□□□□□ -1.68
LTBR-212ENST00000543542 KIR3DS1Q14943 382 aa4.58□□□□□ -1.68
LTBR-212ENST00000543542 SMUG1Q53HV7 270 aa4.58□□□□□ -1.68
LTBR-212ENST00000543542 SAPCD1Q5SSQ6 148 aa4.58□□□□□ -1.68
LTBR-212ENST00000543542 FAM159AQ6UWV7 190 aa4.58□□□□□ -1.68
LTBR-212ENST00000543542 ZNF705AQ6ZN79 300 aaPredicted RBP4.58□□□□□ -1.68
LTBR-212ENST00000543542 C1orf158Q8N1D5 194 aa4.58□□□□□ -1.68
LTBR-212ENST00000543542 ZNF680Q8NEM1 530 aa4.58□□□□□ -1.68
LTBR-212ENST00000543542 PCNPQ8WW12 178 aaKnown RBP4.58□□□□□ -1.68
LTBR-212ENST00000543542 FMC1Q96HJ9 113 aa4.58□□□□□ -1.68
LTBR-212ENST00000543542 LINC00479Q96M42 142 aa4.58□□□□□ -1.68
LTBR-212ENST00000543542 WWC2-AS2Q96NR7 200 aa4.58□□□□□ -1.68
LTBR-212ENST00000543542 TXNDC17Q9BRA2 123 aa4.58□□□□□ -1.68
LTBR-212ENST00000543542 EIF5A2Q9GZV4 153 aaKnown RBP4.58□□□□□ -1.68
LTBR-212ENST00000543542 MED9Q9NWA0 146 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms