RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 VGLL1Q99990 258 aa9.18□□□□□ -0.94
TNFRSF1A-215ENST00000543359 MRPL32Q9BYC8 188 aaKnown RBP9.18□□□□□ -0.94
TNFRSF1A-215ENST00000543359 OR51M1Q9H341 326 aa9.18□□□□□ -0.94
TNFRSF1A-215ENST00000543359 WFDC1Q9HC57 220 aa9.18□□□□□ -0.94
TNFRSF1A-215ENST00000543359 FUT9Q9Y231 359 aa9.18□□□□□ -0.94
TNFRSF1A-215ENST00000543359 DNAH5Q8TE73 4624 aa9.18□□□□□ -0.94
TNFRSF1A-215ENST00000543359 F5H768 121 aa9.17□□□□□ -0.94
TNFRSF1A-215ENST00000543359 SLC25A5P05141 298 aaKnown RBP9.17□□□□□ -0.94
TNFRSF1A-215ENST00000543359 ATP5G1P05496 136 aa9.17□□□□□ -0.94
TNFRSF1A-215ENST00000543359 CRISP2P16562 243 aa9.17□□□□□ -0.94
TNFRSF1A-215ENST00000543359 RPL12P30050 165 aaKnown RBP9.17□□□□□ -0.94
TNFRSF1A-215ENST00000543359 ATP5G3P48201 142 aa9.17□□□□□ -0.94
TNFRSF1A-215ENST00000543359 ICAM4Q14773 271 aa9.17□□□□□ -0.94
TNFRSF1A-215ENST00000543359 PAXXQ9BUH6 204 aa9.17□□□□□ -0.94
TNFRSF1A-215ENST00000543359 MBD2Q9UBB5 411 aa9.17□□□□□ -0.94
TNFRSF1A-215ENST00000543359 NMBP08949 121 aa9.16□□□□□ -0.94
TNFRSF1A-215ENST00000543359 OR10J4P0C629 311 aa9.16□□□□□ -0.94
TNFRSF1A-215ENST00000543359 DAZ2Q13117 558 aaKnown RBP9.16□□□□□ -0.94
TNFRSF1A-215ENST00000543359 PRR9Q5T870 116 aa9.16□□□□□ -0.94
TNFRSF1A-215ENST00000543359 Q6ZQT7 251 aa9.16□□□□□ -0.94
TNFRSF1A-215ENST00000543359 LINC00336Q6ZUF6 198 aa9.16□□□□□ -0.94
TNFRSF1A-215ENST00000543359 ZFAND2AQ8N6M9 145 aa9.16□□□□□ -0.94
TNFRSF1A-215ENST00000543359 C11orf72Q8NBR9 251 aa9.16□□□□□ -0.94
TNFRSF1A-215ENST00000543359 RNF141Q8WVD5 230 aa9.16□□□□□ -0.94
TNFRSF1A-215ENST00000543359 PHYHIPLQ96FC7 376 aa9.16□□□□□ -0.94
TNFRSF1A-215ENST00000543359 PYGO2Q9BRQ0 406 aa9.16□□□□□ -0.94
TNFRSF1A-215ENST00000543359 LINC00467Q9BRT7 94 aa9.16□□□□□ -0.94
TNFRSF1A-215ENST00000543359 SMIM3Q9BZL3 60 aa9.16□□□□□ -0.94
TNFRSF1A-215ENST00000543359 KCNIP2Q9NS61 270 aa9.16□□□□□ -0.94
TNFRSF1A-215ENST00000543359 ALG5Q9Y673 324 aa9.16□□□□□ -0.94
TNFRSF1A-215ENST00000543359 IGLV2-18A0A075B6J9 118 aa9.15□□□□□ -0.94
TNFRSF1A-215ENST00000543359 IGKV2-40A0A087WW87 121 aaPredicted RBP9.15□□□□□ -0.94
TNFRSF1A-215ENST00000543359 C7orf71A4D174 169 aa9.15□□□□□ -0.94
TNFRSF1A-215ENST00000543359 C17orf112F2Z3M2 114 aa9.15□□□□□ -0.94
TNFRSF1A-215ENST00000543359 IGKV2D-40P01614 121 aaPredicted RBP9.15□□□□□ -0.94
TNFRSF1A-215ENST00000543359 PET100P0DJ07 73 aa9.15□□□□□ -0.94
TNFRSF1A-215ENST00000543359 HOXA5P20719 270 aa9.15□□□□□ -0.94
TNFRSF1A-215ENST00000543359 BTN1A1Q13410 526 aa9.15□□□□□ -0.94
TNFRSF1A-215ENST00000543359 FFAR4Q5NUL3 377 aa9.15□□□□□ -0.94
TNFRSF1A-215ENST00000543359 FAM122CQ6P4D5 195 aa9.15□□□□□ -0.94
TNFRSF1A-215ENST00000543359 UBE2DNLQ8IWF7 75 aa9.15□□□□□ -0.94
TNFRSF1A-215ENST00000543359 CCDC28AQ8IWP9 274 aa9.15□□□□□ -0.94
TNFRSF1A-215ENST00000543359 AAMDCQ9H7C9 122 aa9.15□□□□□ -0.94
TNFRSF1A-215ENST00000543359 ZNF492Q9P255 531 aa9.15□□□□□ -0.94
TNFRSF1A-215ENST00000543359 MUC4Q99102 2169 aa9.14□□□□□ -0.95
TNFRSF1A-215ENST00000543359 EIF3GO75821 320 aaKnown RBP eCLIP9.14□□□□□ -0.95
TNFRSF1A-215ENST00000543359 RNASE4P34096 147 aaKnown RBP9.14□□□□□ -0.95
TNFRSF1A-215ENST00000543359 FAM3BP58499 235 aaPredicted RBP9.14□□□□□ -0.95
TNFRSF1A-215ENST00000543359 ANXA2RQ3ZCQ2 193 aa9.14□□□□□ -0.95
TNFRSF1A-215ENST00000543359 Q6ZTI0 123 aa9.14□□□□□ -0.95
TNFRSF1A-215ENST00000543359 HSPG2P98160 4391 aa9.14□□□□□ -0.95
TNFRSF1A-215ENST00000543359 RANP62826 216 aaKnown RBP9.13□□□□□ -0.95
TNFRSF1A-215ENST00000543359 LYPD1Q8N2G4 141 aa9.13□□□□□ -0.95
TNFRSF1A-215ENST00000543359 ZNRF2Q8NHG8 242 aa9.13□□□□□ -0.95
TNFRSF1A-215ENST00000543359 GSN-AS1Q9NRJ2 163 aa9.13□□□□□ -0.95
TNFRSF1A-215ENST00000543359 LINC00588Q9Y4M8 146 aa9.13□□□□□ -0.95
TNFRSF1A-215ENST00000543359 APOBP04114 4563 aaKnown RBP9.12□□□□□ -0.95
TNFRSF1A-215ENST00000543359 TRAV26-1A0A087WT03 109 aa9.12□□□□□ -0.95
TNFRSF1A-215ENST00000543359 TRBV7-9A0A0J9YWB2 115 aa9.12□□□□□ -0.95
TNFRSF1A-215ENST00000543359 GAGE12BA1L429 117 aa9.12□□□□□ -0.95
TNFRSF1A-215ENST00000543359 PRSS29PA6NIE9 313 aa9.12□□□□□ -0.95
TNFRSF1A-215ENST00000543359 SNURFLB1AK76 121 aa9.12□□□□□ -0.95
TNFRSF1A-215ENST00000543359 OR7C2O60412 319 aa9.12□□□□□ -0.95
TNFRSF1A-215ENST00000543359 GAGE7O76087 117 aa9.12□□□□□ -0.95
TNFRSF1A-215ENST00000543359 NUDT3O95989 172 aa9.12□□□□□ -0.95
TNFRSF1A-215ENST00000543359 PTTG1O95997 202 aa9.12□□□□□ -0.95
TNFRSF1A-215ENST00000543359 IFNA5P01569 189 aa9.12□□□□□ -0.95
TNFRSF1A-215ENST00000543359 GPX1P07203 203 aa9.12□□□□□ -0.95
TNFRSF1A-215ENST00000543359 GAGE12FP0CL80 117 aa9.12□□□□□ -0.95
TNFRSF1A-215ENST00000543359 GAGE12GP0CL81 117 aa9.12□□□□□ -0.95
TNFRSF1A-215ENST00000543359 GAGE12IP0CL82 117 aa9.12□□□□□ -0.95
TNFRSF1A-215ENST00000543359 ZNF138P52744 262 aa9.12□□□□□ -0.95
TNFRSF1A-215ENST00000543359 TMEM78Q5T7P6 136 aa9.12□□□□□ -0.95
TNFRSF1A-215ENST00000543359 EIF4E3Q8N5X7 224 aaKnown RBP9.12□□□□□ -0.95
TNFRSF1A-215ENST00000543359 SCGB1C1Q8TD33 95 aa9.12□□□□□ -0.95
TNFRSF1A-215ENST00000543359 C18orf15Q96N68 181 aa9.12□□□□□ -0.95
TNFRSF1A-215ENST00000543359 Q9H3A6 140 aa9.12□□□□□ -0.95
TNFRSF1A-215ENST00000543359 TP53TG3Q9ULZ0 132 aa9.12□□□□□ -0.95
TNFRSF1A-215ENST00000543359 RYR1P21817 5038 aa9.11□□□□□ -0.95
TNFRSF1A-215ENST00000543359 SPINK4O60575 86 aa9.11□□□□□ -0.95
TNFRSF1A-215ENST00000543359 UBE2L3P68036 154 aaKnown RBP9.11□□□□□ -0.95
TNFRSF1A-215ENST00000543359 OR5I1Q13606 314 aa9.11□□□□□ -0.95
TNFRSF1A-215ENST00000543359 Q5BKY6 102 aa9.11□□□□□ -0.95
TNFRSF1A-215ENST00000543359 ZNF680Q8NEM1 530 aa9.11□□□□□ -0.95
TNFRSF1A-215ENST00000543359 Q8TAT8 98 aa9.11□□□□□ -0.95
TNFRSF1A-215ENST00000543359 RXFP4Q8TDU9 374 aa9.11□□□□□ -0.95
TNFRSF1A-215ENST00000543359 TMPRSS5Q9H3S3 457 aa9.11□□□□□ -0.95
TNFRSF1A-215ENST00000543359 KLF12Q9Y4X4 402 aa9.11□□□□□ -0.95
TNFRSF1A-215ENST00000543359 RBAKDNA6NC62 111 aa9.1□□□□□ -0.95
TNFRSF1A-215ENST00000543359 DIRC3C9JPN6 131 aa9.1□□□□□ -0.95
TNFRSF1A-215ENST00000543359 M6PRP20645 277 aa9.1□□□□□ -0.95
TNFRSF1A-215ENST00000543359 TCL1AP56279 114 aa9.1□□□□□ -0.95
TNFRSF1A-215ENST00000543359 RAB2AP61019 212 aa9.1□□□□□ -0.95
TNFRSF1A-215ENST00000543359 KHDC3LQ587J8 217 aa9.1□□□□□ -0.95
TNFRSF1A-215ENST00000543359 IGHV1OR15-1A0A075B7D0 117 aa9.09□□□□□ -0.95
TNFRSF1A-215ENST00000543359 A0A0J9YY99 117 aa9.09□□□□□ -0.95
TNFRSF1A-215ENST00000543359 NBDYA0A0U1RRE5 68 aa9.09□□□□□ -0.95
TNFRSF1A-215ENST00000543359 H3BNG1 76 aa9.09□□□□□ -0.95
TNFRSF1A-215ENST00000543359 TAS2R45P59539 299 aa9.09□□□□□ -0.95
TNFRSF1A-215ENST00000543359 ZNF266Q14584 549 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms