RNA–Protein interactions for RNA: ENST00000543190.5

LTBR-211, Transcript of lymphotoxin beta receptor, humanhuman

TSL 3 BASIC

Gene LTBR, Length 785 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-211ENST00000543190 IGSF23A1L1A6 192 aa12.88□□□□□ -0.35
LTBR-211ENST00000543190 GAGE12BA1L429 117 aa12.88□□□□□ -0.35
LTBR-211ENST00000543190 GAGE7O76087 117 aa12.88□□□□□ -0.35
LTBR-211ENST00000543190 GAGE12FP0CL80 117 aa12.88□□□□□ -0.35
LTBR-211ENST00000543190 GAGE12GP0CL81 117 aa12.88□□□□□ -0.35
LTBR-211ENST00000543190 GAGE12IP0CL82 117 aa12.88□□□□□ -0.35
LTBR-211ENST00000543190 Q6ZTI0 123 aa12.88□□□□□ -0.35
LTBR-211ENST00000543190 VSIG2Q96IQ7 327 aa12.88□□□□□ -0.35
LTBR-211ENST00000543190 SEC22CQ9BRL7 303 aa12.88□□□□□ -0.35
LTBR-211ENST00000543190 FAM25EA8MYX2 175 aa12.87□□□□□ -0.35
LTBR-211ENST00000543190 M0R3E3 92 aa12.87□□□□□ -0.35
LTBR-211ENST00000543190 PRB4P10163 310 aaPredicted RBP12.87□□□□□ -0.35
LTBR-211ENST00000543190 BAXQ07812 192 aa12.87□□□□□ -0.35
LTBR-211ENST00000543190 RAB32Q13637 225 aa12.87□□□□□ -0.35
LTBR-211ENST00000543190 EIF4E3Q8N5X7 224 aaKnown RBP12.87□□□□□ -0.35
LTBR-211ENST00000543190 NPCDR1Q9BY65 106 aa12.87□□□□□ -0.35
LTBR-211ENST00000543190 AGPAT4-IT1Q9H0P7 198 aa12.87□□□□□ -0.35
LTBR-211ENST00000543190 TMPRSS5Q9H3S3 457 aa12.87□□□□□ -0.35
LTBR-211ENST00000543190 UBE2L5PA0A1B0GUS4 154 aa12.86□□□□□ -0.35
LTBR-211ENST00000543190 SPINK4O60575 86 aa12.86□□□□□ -0.35
LTBR-211ENST00000543190 H2AFB2P0C5Z0 115 aa12.86□□□□□ -0.35
LTBR-211ENST00000543190 TCL1AP56279 114 aa12.86□□□□□ -0.35
LTBR-211ENST00000543190 FAM167A-AS1Q96KT0 104 aa12.86□□□□□ -0.35
LTBR-211ENST00000543190 A0A096LPF7 62 aa12.85□□□□□ -0.35
LTBR-211ENST00000543190 ZFAND2AQ8N6M9 145 aa12.85□□□□□ -0.35
LTBR-211ENST00000543190 AAMDCQ9H7C9 122 aa12.85□□□□□ -0.35
LTBR-211ENST00000543190 A0A0J9YY99 117 aa12.84□□□□□ -0.35
LTBR-211ENST00000543190 FGF7P21781 194 aa12.84□□□□□ -0.35
LTBR-211ENST00000543190 ST6GAL2Q96JF0 529 aa12.84□□□□□ -0.35
LTBR-211ENST00000543190 GSN-AS1Q9NRJ2 163 aa12.84□□□□□ -0.35
LTBR-211ENST00000543190 TIMM9Q9Y5J7 89 aa12.84□□□□□ -0.35
LTBR-211ENST00000543190 CD300CQ08708 224 aa12.83□□□□□ -0.36
LTBR-211ENST00000543190 SLAQ13239 276 aa12.83□□□□□ -0.36
LTBR-211ENST00000543190 SLC25A2Q9BXI2 301 aa12.83□□□□□ -0.36
LTBR-211ENST00000543190 MRPL32Q9BYC8 188 aaKnown RBP12.83□□□□□ -0.36
LTBR-211ENST00000543190 ZNF492Q9P255 531 aa12.83□□□□□ -0.36
LTBR-211ENST00000543190 FUT9Q9Y231 359 aa12.83□□□□□ -0.36
LTBR-211ENST00000543190 TRGV2A0A075B6R0 118 aa12.82□□□□□ -0.36
LTBR-211ENST00000543190 FAM240BA0A1B0GVZ2 78 aa12.82□□□□□ -0.36
LTBR-211ENST00000543190 RBAKDNA6NC62 111 aa12.82□□□□□ -0.36
LTBR-211ENST00000543190 NBEAP1P0C6P0 100 aa12.82□□□□□ -0.36
LTBR-211ENST00000543190 PYYP10082 97 aa12.82□□□□□ -0.36
LTBR-211ENST00000543190 S100A10P60903 97 aa12.82□□□□□ -0.36
LTBR-211ENST00000543190 ERCC8Q13216 396 aa12.82□□□□□ -0.36
LTBR-211ENST00000543190 ASAH1Q13510 395 aa12.82□□□□□ -0.36
LTBR-211ENST00000543190 Q6ZRN7 208 aaPredicted RBP12.82□□□□□ -0.36
LTBR-211ENST00000543190 Q8N1X5 172 aa12.82□□□□□ -0.36
LTBR-211ENST00000543190 LYPD1Q8N2G4 141 aa12.82□□□□□ -0.36
LTBR-211ENST00000543190 VGLL1Q99990 258 aa12.82□□□□□ -0.36
LTBR-211ENST00000543190 NMES1Q9C002 83 aa12.82□□□□□ -0.36
LTBR-211ENST00000543190 KCNIP2Q9NS61 270 aa12.82□□□□□ -0.36
LTBR-211ENST00000543190 TP53TG3Q9ULZ0 132 aa12.82□□□□□ -0.36
LTBR-211ENST00000543190 KLF12Q9Y4X4 402 aa12.82□□□□□ -0.36
LTBR-211ENST00000543190 APOBP04114 4563 aaKnown RBP12.81□□□□□ -0.36
LTBR-211ENST00000543190 K7EP13 123 aa12.81□□□□□ -0.36
LTBR-211ENST00000543190 GPX1P07203 203 aa12.81□□□□□ -0.36
LTBR-211ENST00000543190 BTN1A1Q13410 526 aa12.81□□□□□ -0.36
LTBR-211ENST00000543190 TMEM78Q5T7P6 136 aa12.81□□□□□ -0.36
LTBR-211ENST00000543190 SPATA12Q7Z6I5 190 aa12.81□□□□□ -0.36
LTBR-211ENST00000543190 SLC25A31Q9H0C2 315 aa12.81□□□□□ -0.36
LTBR-211ENST00000543190 GPN1Q9HCN4 374 aaPredicted RBP12.81□□□□□ -0.36
LTBR-211ENST00000543190 E5RGE8 158 aa12.8□□□□□ -0.36
LTBR-211ENST00000543190 J3KRW8 73 aa12.8□□□□□ -0.36
LTBR-211ENST00000543190 NHLH2Q02577 135 aa12.8□□□□□ -0.36
LTBR-211ENST00000543190 ICAM4Q14773 271 aa12.8□□□□□ -0.36
LTBR-211ENST00000543190 GCSAMLQ5JQS6 135 aa12.8□□□□□ -0.36
LTBR-211ENST00000543190 MZT2BQ6NZ67 158 aa12.8□□□□□ -0.36
LTBR-211ENST00000543190 EXOC3-AS1Q8N2X6 119 aa12.8□□□□□ -0.36
LTBR-211ENST00000543190 MAPKAPK5-AS1Q8N8E1 139 aa12.8□□□□□ -0.36
LTBR-211ENST00000543190 OR5C1Q8NGR4 320 aa12.8□□□□□ -0.36
LTBR-211ENST00000543190 FXYD5Q96DB9 178 aa12.8□□□□□ -0.36
LTBR-211ENST00000543190 PRO0255Q9UI72 69 aa12.8□□□□□ -0.36
LTBR-211ENST00000543190 LENEPQ9Y5L5 61 aa12.8□□□□□ -0.36
LTBR-211ENST00000543190 IGHV1OR15-1A0A075B7D0 117 aa12.79□□□□□ -0.36
LTBR-211ENST00000543190 TRGV1A0A0A0MS02 117 aa12.79□□□□□ -0.36
LTBR-211ENST00000543190 SIVA1O15304 175 aa12.79□□□□□ -0.36
LTBR-211ENST00000543190 RNASE4P34096 147 aaKnown RBP12.79□□□□□ -0.36
LTBR-211ENST00000543190 CYCSP99999 105 aaKnown RBP12.79□□□□□ -0.36
LTBR-211ENST00000543190 IQCF2Q8IXL9 164 aa12.79□□□□□ -0.36
LTBR-211ENST00000543190 OR51M1Q9H341 326 aa12.79□□□□□ -0.36
LTBR-211ENST00000543190 ZNF138P52744 262 aa12.78□□□□□ -0.36
LTBR-211ENST00000543190 KRTAP10-2P60368 255 aa12.78□□□□□ -0.36
LTBR-211ENST00000543190 S100ZQ8WXG8 99 aa12.78□□□□□ -0.36
LTBR-211ENST00000543190 WDR61Q9GZS3 305 aaKnown RBP12.78□□□□□ -0.36
LTBR-211ENST00000543190 ICOSQ9Y6W8 199 aa12.78□□□□□ -0.36
LTBR-211ENST00000543190 DNAH5Q8TE73 4624 aa12.77□□□□□ -0.36
LTBR-211ENST00000543190 LINC00315P59091 139 aa12.77□□□□□ -0.37
LTBR-211ENST00000543190 ZNF266Q14584 549 aa12.77□□□□□ -0.37
LTBR-211ENST00000543190 PRR9Q5T870 116 aa12.77□□□□□ -0.37
LTBR-211ENST00000543190 MIR17HGQ75NE6 70 aa12.77□□□□□ -0.37
LTBR-211ENST00000543190 BLNKQ8WV28 456 aa12.77□□□□□ -0.37
LTBR-211ENST00000543190 TMED6Q8WW62 240 aa12.77□□□□□ -0.37
LTBR-211ENST00000543190 IGKV2-40A0A087WW87 121 aaPredicted RBP12.76□□□□□ -0.37
LTBR-211ENST00000543190 RGS13O14921 159 aa12.76□□□□□ -0.37
LTBR-211ENST00000543190 PRAF2O60831 178 aa12.76□□□□□ -0.37
LTBR-211ENST00000543190 IGKV2D-40P01614 121 aaPredicted RBP12.76□□□□□ -0.37
LTBR-211ENST00000543190 CRYBA4P53673 196 aa12.76□□□□□ -0.37
LTBR-211ENST00000543190 FHL2Q14192 279 aa12.76□□□□□ -0.37
LTBR-211ENST00000543190 Q6AWC8 147 aa12.76□□□□□ -0.37
LTBR-211ENST00000543190 ARL6IP6Q8N6S5 226 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms