RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 GNG3P63215 75 aa2.57□□□□□ -2
SFSWAP-211ENST00000542813 CCL20P78556 96 aa2.57□□□□□ -2
SFSWAP-211ENST00000542813 HLA-DRB3P79483 266 aa2.57□□□□□ -2
SFSWAP-211ENST00000542813 MEF2BQ02080 365 aaPredicted RBP2.57□□□□□ -2
SFSWAP-211ENST00000542813 HIST1H1AQ02539 215 aaPredicted RBP2.57□□□□□ -2
SFSWAP-211ENST00000542813 LRRC75BQ2VPJ9 315 aa2.57□□□□□ -2
SFSWAP-211ENST00000542813 TMEM215Q68D42 235 aa2.57□□□□□ -2
SFSWAP-211ENST00000542813 SPINK14Q6IE38 97 aa2.57□□□□□ -2
SFSWAP-211ENST00000542813 MRPL54Q6P161 138 aaKnown RBP2.57□□□□□ -2
SFSWAP-211ENST00000542813 SCGB1D4Q6XE38 83 aa2.57□□□□□ -2
SFSWAP-211ENST00000542813 VN1R4Q7Z5H5 301 aa2.57□□□□□ -2
SFSWAP-211ENST00000542813 MARCH3Q86UD3 253 aa2.57□□□□□ -2
SFSWAP-211ENST00000542813 LRP11Q86VZ4 500 aa2.57□□□□□ -2
SFSWAP-211ENST00000542813 OR2M3Q8NG83 312 aa2.57□□□□□ -2
SFSWAP-211ENST00000542813 OR52R1Q8NGF1 315 aa2.57□□□□□ -2
SFSWAP-211ENST00000542813 OR5A1Q8NGJ0 315 aa2.57□□□□□ -2
SFSWAP-211ENST00000542813 OR2K2Q8NGT1 345 aa2.57□□□□□ -2
SFSWAP-211ENST00000542813 ZNRF2Q8NHG8 242 aa2.57□□□□□ -2
SFSWAP-211ENST00000542813 MFSD8Q8NHS3 518 aa2.57□□□□□ -2
SFSWAP-211ENST00000542813 SLC25A40Q8TBP6 338 aa2.57□□□□□ -2
SFSWAP-211ENST00000542813 AQP3Q92482 292 aa2.57□□□□□ -2
SFSWAP-211ENST00000542813 Q96M85 177 aa2.57□□□□□ -2
SFSWAP-211ENST00000542813 NMES1Q9C002 83 aa2.57□□□□□ -2
SFSWAP-211ENST00000542813 MAP1LC3BQ9GZQ8 125 aa2.57□□□□□ -2
SFSWAP-211ENST00000542813 EIF5A2Q9GZV4 153 aaKnown RBP2.57□□□□□ -2
SFSWAP-211ENST00000542813 AICDAQ9GZX7 198 aa2.57□□□□□ -2
SFSWAP-211ENST00000542813 GTSF1LQ9H1H1 148 aa2.57□□□□□ -2
SFSWAP-211ENST00000542813 BOKQ9UMX3 212 aaPredicted RBP2.57□□□□□ -2
SFSWAP-211ENST00000542813 LSM5Q9Y4Y9 91 aaKnown RBP2.57□□□□□ -2
SFSWAP-211ENST00000542813 C2orf16Q68DN1 1984 aa2.57□□□□□ -2
SFSWAP-211ENST00000542813 RP1L1Q8IWN7 2480 aaPredicted RBP2.57□□□□□ -2
SFSWAP-211ENST00000542813 ANKHD1Q8IWZ3 2542 aaKnown RBP2.57□□□□□ -2
SFSWAP-211ENST00000542813 COL4A2P08572 1712 aa2.56□□□□□ -2
SFSWAP-211ENST00000542813 KIAA1549LQ6ZVL6 1849 aa2.56□□□□□ -2
SFSWAP-211ENST00000542813 YLPM1P49750 1951 aaKnown RBP2.56□□□□□ -2
SFSWAP-211ENST00000542813 MDC1Q14676 2089 aaKnown RBP2.56□□□□□ -2
SFSWAP-211ENST00000542813 ASCC3Q8N3C0 2202 aaKnown RBP2.56□□□□□ -2
SFSWAP-211ENST00000542813 NBASA2RRP1 2371 aa2.56□□□□□ -2
SFSWAP-211ENST00000542813 TRAV27A0A087WT01 109 aa2.56□□□□□ -2
SFSWAP-211ENST00000542813 A0A087WX48 190 aa2.56□□□□□ -2
SFSWAP-211ENST00000542813 IGHV1-3A0A0C4DH29 117 aa2.56□□□□□ -2
SFSWAP-211ENST00000542813 WI2-2373I1.2A0A1W2PRP0 233 aa2.56□□□□□ -2
SFSWAP-211ENST00000542813 PINLYPA6NC86 204 aa2.56□□□□□ -2
SFSWAP-211ENST00000542813 RIIAD1A6NNX1 92 aa2.56□□□□□ -2
SFSWAP-211ENST00000542813 C4orf51C9J302 202 aa2.56□□□□□ -2
SFSWAP-211ENST00000542813 C15orf65H3BRN8 121 aa2.56□□□□□ -2
SFSWAP-211ENST00000542813 H3BSH0 61 aa2.56□□□□□ -2
SFSWAP-211ENST00000542813 K7EP34 96 aa2.56□□□□□ -2
SFSWAP-211ENST00000542813 IFNA1P01562 189 aa2.56□□□□□ -2
SFSWAP-211ENST00000542813 ATP5G1P05496 136 aa2.56□□□□□ -2
SFSWAP-211ENST00000542813 PFN1P07737 140 aaKnown RBP2.56□□□□□ -2
SFSWAP-211ENST00000542813 GUCA1AP43080 201 aaPredicted RBP2.56□□□□□ -2
SFSWAP-211ENST00000542813 ZNF83P51522 516 aa2.56□□□□□ -2
SFSWAP-211ENST00000542813 YPEL3P61236 119 aaPredicted RBP2.56□□□□□ -2
SFSWAP-211ENST00000542813 SUPT4H1P63272 117 aaKnown RBP2.56□□□□□ -2
SFSWAP-211ENST00000542813 PSG9Q00887 426 aa2.56□□□□□ -2
SFSWAP-211ENST00000542813 SPATA45Q537H7 98 aa2.56□□□□□ -2
SFSWAP-211ENST00000542813 LINC01590Q5TEZ4 76 aa2.56□□□□□ -2
SFSWAP-211ENST00000542813 SAXO1Q8IYX7 474 aa2.56□□□□□ -2
SFSWAP-211ENST00000542813 ZNF709Q8N972 641 aa2.56□□□□□ -2
SFSWAP-211ENST00000542813 OR8A1Q8NGG7 326 aa2.56□□□□□ -2
SFSWAP-211ENST00000542813 OR51A4Q8NGJ6 313 aa2.56□□□□□ -2
SFSWAP-211ENST00000542813 WFDC5Q8TCV5 224 aa2.56□□□□□ -2
SFSWAP-211ENST00000542813 C2orf15Q8WU43 125 aaKnown RBP2.56□□□□□ -2
SFSWAP-211ENST00000542813 APOBEC3DQ96AK3 386 aaPredicted RBP2.56□□□□□ -2
SFSWAP-211ENST00000542813 DERL1Q9BUN8 251 aa2.56□□□□□ -2
SFSWAP-211ENST00000542813 SMIM3Q9BZL3 60 aa2.56□□□□□ -2
SFSWAP-211ENST00000542813 TMEM126AQ9H061 195 aa2.56□□□□□ -2
SFSWAP-211ENST00000542813 LPAR5Q9H1C0 372 aa2.56□□□□□ -2
SFSWAP-211ENST00000542813 SH3BGRL3Q9H299 93 aa2.56□□□□□ -2
SFSWAP-211ENST00000542813 SPANXCQ9NY87 97 aa2.56□□□□□ -2
SFSWAP-211ENST00000542813 NAT8BQ9UHF3 227 aa2.56□□□□□ -2
SFSWAP-211ENST00000542813 ZNF443Q9Y2A4 671 aaPredicted RBP2.56□□□□□ -2
SFSWAP-211ENST00000542813 YTHDF2Q9Y5A9 579 aaKnown RBP2.56□□□□□ -2
SFSWAP-211ENST00000542813 PDZD2O15018 2839 aa2.56□□□□□ -2
SFSWAP-211ENST00000542813 SCN2AQ99250 2005 aa2.56□□□□□ -2
SFSWAP-211ENST00000542813 SPAG17Q6Q759 2223 aa2.56□□□□□ -2
SFSWAP-211ENST00000542813 IGHV1-45A0A0A0MS14 117 aa2.55□□□□□ -2
SFSWAP-211ENST00000542813 BORCS7-ASMTA0A0B4J1R7 106 aa2.55□□□□□ -2
SFSWAP-211ENST00000542813 IGKV3D-20A0A0C4DH25 116 aa2.55□□□□□ -2
SFSWAP-211ENST00000542813 A0A1B0GV50 99 aa2.55□□□□□ -2
SFSWAP-211ENST00000542813 hADV38S2A0JD32 116 aa2.55□□□□□ -2
SFSWAP-211ENST00000542813 SMIM9A6NGZ8 99 aa2.55□□□□□ -2
SFSWAP-211ENST00000542813 ZNF736B4DX44 427 aaPredicted RBP2.55□□□□□ -2
SFSWAP-211ENST00000542813 ZNF878C9JN71 531 aa2.55□□□□□ -2
SFSWAP-211ENST00000542813 MUC22E2RYF6 1773 aaPredicted RBP2.55□□□□□ -2
SFSWAP-211ENST00000542813 K7EQS6 105 aa2.55□□□□□ -2
SFSWAP-211ENST00000542813 DEGS1O15121 323 aa2.55□□□□□ -2
SFSWAP-211ENST00000542813 SFT2D2O95562 160 aa2.55□□□□□ -2
SFSWAP-211ENST00000542813 STATHP02808 62 aa2.55□□□□□ -2
SFSWAP-211ENST00000542813 CD28P10747 220 aa2.55□□□□□ -2
SFSWAP-211ENST00000542813 ALOX5APP20292 161 aa2.55□□□□□ -2
SFSWAP-211ENST00000542813 CCR2P41597 374 aa2.55□□□□□ -2
SFSWAP-211ENST00000542813 REG1BP48304 166 aa2.55□□□□□ -2
SFSWAP-211ENST00000542813 HINT1P49773 126 aaPredicted RBP2.55□□□□□ -2
SFSWAP-211ENST00000542813 TCTAP57738 103 aa2.55□□□□□ -2
SFSWAP-211ENST00000542813 KRTAP10-12P60413 245 aa2.55□□□□□ -2
SFSWAP-211ENST00000542813 LCN6P62502 163 aa2.55□□□□□ -2
SFSWAP-211ENST00000542813 ATRQ13535 2644 aa2.55□□□□□ -2
SFSWAP-211ENST00000542813 ADIRFQ15847 76 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms